*2013/12/16 15:38:35.95 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2012/08/10 14:09:22.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 115 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : CC9BCDB8 NUMBER OF CHANNELS : 7 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 4.145 118.028 2 Temperature:Primary 'deg C (ITS90)' 7.7226 10.969 3 Fluorescence:URU:Wetlabs mg/m^3 0.204 1.276 4 Salinity:T0:C0 PSS-78 30.9933 33.0374 5 Oxygen:Dissolved:SBE mL/L 3.035 5.23 6 Oxygen:Dissolved:SBE umol/kg 132.1419 228.0821 7 Number_of_bin_records n/a 13 44 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 6 F ' ' 1 7 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2012-54\Pro $END *ADMINISTRATION MISSION : 2012-54 AGENCY : 'PBS, Marine Ecosystems and Aquaculture Division,' CONTINUED : ' Nanaimo, B.C.' COUNTRY : Canada PROJECT : Conservation Biology Herring Trawl Survey SCIENTIST : Boldt J. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : WCVI STATION : 7 EVENT NUMBER : 13 LATITUDE : 48 33.21000 N ! (deg min) LONGITUDE : 124 47.34000 W ! (deg min) WATER DEPTH : 118 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0443 $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.1.2 2012/11/03 14:49:17 8642 8642 CLEAN 5.0.4 2012/11/03 14:49:47 8642 8642 SHIFTDAT 3.4 2012/11/03 15:19:41 8642 8642 SHIFTDAT 3.4 2012/11/03 15:30:36 8642 8642 SHIFTDAT 3.4 2012/11/03 15:30:58 8642 8642 SHIFTDAT 3.4 2012/11/03 15:31:21 8642 8642 DELETE 6.3 2012/11/03 15:36:32 8642 2880 CTDEDIT 4.61 2012/11/03 16:59:09 2880 2836 CALIB 11.7 2012/11/05 07:59:11 2836 2836 FILTERS 4.3 2012/11/05 07:59:24 2836 2836 BINAVE 4.1.1 2012/11/05 07:59:31 2836 115 REMOVECH 8.1.1 2012/11/05 08:08:34 115 115 CHGUNITS 3.0 2012/11/05 08:09:21 115 115 REORDER 1.3 2012/11/05 08:09:49 ? ? HDREDIT2 2.5.1 2012/11/05 08:11:24 ? ? CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:38:35 115 115 $END $REMARKS -CLEAN functions: 2012/11/03 14:49:35 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:Wetlabs:ECO-AFL # of Records to Advance (-ve for Delay): At REC# 0 Shift= 12.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: pH:SBE # of Records to Advance (-ve for Delay): At REC# 0 Shift= 48.00 -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 108.15 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT 2012/11/03 16:59:09 44 records were deleted in this editing session. 3 changes in channel Salinity:T0:C0 -CALIB parameters: 2012/11/05 07:59:11 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2012-54\Processing\doc\2012-54-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 14 Oxygen:Dissolved:SBE mL/L 10 0.4800000E-01 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:Wetlabs:ECO-AFL Fluorescence:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2012/11/05 08:08:34 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] pH:SBE [pH Units] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2012/11/05 08:11:24 Applied edit header: P:\Cruise_Data_Processing\2012-54\Processing\doc\2012-54-HDR.TXT Channel 1: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: Salinity:Practical:T0:C0 [PSS-78] Name: Salinity:T0:C0 ==> Salinity:Practical:T0:C0 $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2012- Herring August Trawl\2012-54-013.hex Software Version Seasave V 7.21d Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Aug 10 2012 14:11:33 NMEA Latitude = 48 33.21 N NMEA Longitude = 124 47.34 W NMEA UTC (Time) = Aug 10 2012 14:09:22 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2012-51 Station: 7 Depth(m): 118 System UTC = Aug 10 2012 13:11:33 # nquan = 15 # nvalues = 8642 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity, Practical [PSU] # name 12 = sal11: Salinity, Practical, 2 [PSU] # name 13 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 14 = flag: flag # span 0 = 1, 8642 # span 1 = 3.105, 118.148 # span 2 = 7.7199, 10.9703 # span 3 = 7.7197, 10.9696 # span 4 = 3.417151, 3.499334 # span 5 = 3.417254, 3.499495 # span 6 = 0.1116, 1.6036 # span 7 = 1.3956, 2.1526 # span 8 = 8.451, 8.601 # span 9 = -1.883, 1.582 # span 10 = 0, 1 # span 11 = 30.9781, 33.0407 # span 12 = 30.9477, 33.0419 # span 13 = 2.98121, 5.18622 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Aug 10 2012 14:09:22 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 63507 # 12-Apr-11 # -4.435468e+004 # -1.845750e-001 # 1.192740e-002 # 3.979900e-002 # 0.000000e+000 # 2.993572e+001 # -3.336200e-004 # 3.759160e-006 # 1.565300e-009 # 0.99986626 # 5.62145 # 0.000000e+000 # 1.283280e-002 # -9.295010e+000 # # # # # # 2710 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.36717391e-003 # 6.46683268e-004 # 2.34981097e-005 # 2.22352352e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2128 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.01926507e+001 # 1.46093888e+000 # -2.51557628e-003 # 2.74924248e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # # # # # # # 0852 # 21-april-2012 # 4.6009 # 2.5060 # # # # # # # # # 0997 # 23-Apr-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.8010e-001 # -0.4816 # 1.4264e-003 # 2.8936e-005 # -9.0212e-007 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 1.5600 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2216 # June 2012 # 1.30000000e+001 # # 0.0427 # # # # datcnv_date = Nov 03 2012 14:12:59, 7.21d [datcnv_vars = 11] # datcnv_in = P:\Cruise_Data_Processing\2012-54\RAW\CTD\2012-54-0013.hex P:\Crui se_Data_Processing\2012-54\Processing\doc\2012-54-ctd-new.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = Nov 03 2012 14:14:11, 7.21d # wildedit_in = P:\Cruise_Data_Processing\2012-54\Processing\convert\2012-54-001 3.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Nov 03 2012 14:34:17, 7.21d # alignctd_in = P:\Cruise_Data_Processing\2012-54\Processing\wildedit\2012-54-00 13.cnv # alignctd_adv = sbeox0V 4.000 # celltm_date = Nov 03 2012 14:39:21, 7.21d # celltm_in = P:\Cruise_Data_Processing\2012-54\Processing\align\2012-54-0013.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 9.0000, 9.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Nov 03 2012 14:40:38, 7.21d [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2012-54\Processing\celltm\2012-54-0013.c nv P:\Cruise_Data_Processing\2012-54\Processing\doc\2012-54-ctd-new.xmlcon # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = yes # file_type = ascii END* CTDEDIT was used to remove some records corrupted by shed wakes; salinity was cleaned lightly. Data Processing Notes: ---------------------------------------------------------------------- Fluorescence data are nominal and unedited, except that some records were removed in editing temperature and salinity. There was no calibration sampling for dissolved oxygen, but the results of cruise 2012-01 were used to derive DO concentration. A small correction was later added based on negative DO values found during 2012-49 in the anoxic layer of Saanich Inlet. There was no calibration sampling for salinity, but the results of cruise 2012-01 in February 2012 suggest calibration drift is <0.001. The SBE pH sensor data has been removed from this file since there was no field calibration information available and there are concerns about how the sensor performs. For details on processing see processing report: 2012-54-proc.doc. ---------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.48E-01 1) $END !--1--- ---2---- ---3--- ---4---- --5--- --6-- -7-- !Pressu Temperat Fluores Salinity Oxygen Oxyge Numb !re ure: cence: :T0:C0 : n: er_o ! Primary URU: Dissol Disso ~bin ! Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- -------- ------ ----- ---- *END OF HEADER 4.1 10.9690 1.220 31.0097 5.23 228.0 21 4.9 10.9650 1.200 31.0094 5.23 228.0 27 6.0 10.9644 1.171 31.0098 5.23 228.0 24 7.0 10.9688 1.276 31.0097 5.23 228.1 27 8.0 10.9671 1.238 31.0095 5.22 227.6 29 9.0 10.9667 1.214 31.0095 5.20 226.7 24 10.0 10.9651 1.248 31.0094 5.18 226.1 19 11.0 10.9547 1.189 31.0084 5.15 224.5 21 12.0 10.9408 1.155 31.0056 4.99 217.5 30 13.0 10.9316 1.132 31.0048 4.71 205.3 28 14.0 10.8333 1.125 30.9933 4.52 197.2 16 15.0 10.5305 1.204 31.0086 4.42 192.7 20 16.0 10.2941 1.259 31.0507 4.34 189.3 26 17.0 10.0870 1.270 31.1248 4.30 187.4 33 18.0 9.9421 1.171 31.1822 4.28 186.6 23 19.0 9.9191 1.151 31.1897 4.24 185.0 19 20.0 9.9138 1.112 31.1889 4.20 182.9 19 21.0 9.8902 1.077 31.1908 4.14 180.6 24 22.0 9.8260 1.085 31.2085 4.09 178.2 33 23.0 9.7167 0.891 31.2794 4.03 175.5 23 24.0 9.6962 0.846 31.3438 3.99 173.8 21 25.0 9.6269 0.814 31.4023 3.96 172.8 22 26.0 9.5667 0.786 31.4441 3.92 170.8 28 27.0 9.5559 0.749 31.4596 3.84 167.3 26 28.0 9.5036 0.683 31.5140 3.79 165.0 20 29.0 9.4341 0.630 31.5712 3.76 163.9 16 30.0 9.3711 0.602 31.6213 3.74 162.9 19 31.0 9.3345 0.587 31.6541 3.71 161.8 28 32.0 9.2795 0.582 31.6981 3.68 160.2 44 33.0 9.2336 0.467 31.7329 3.70 161.3 22 34.0 9.1769 0.435 31.7825 3.75 163.3 17 35.0 9.1571 0.460 31.8155 3.77 164.3 13 36.0 9.1848 0.516 31.8794 3.78 164.7 19 37.0 9.2001 0.526 31.8945 3.79 165.1 24 38.0 9.2063 0.543 31.8994 3.80 165.7 30 39.0 9.2151 0.567 31.9039 3.81 166.1 26 40.0 9.2243 0.595 31.9084 3.83 166.8 25 41.0 9.2251 0.585 31.9089 3.84 167.5 24 42.0 9.2354 0.547 31.9140 3.85 167.8 24 43.0 9.2467 0.613 31.9185 3.85 167.9 20 44.0 9.2497 0.641 31.9203 3.85 167.8 22 45.0 9.2501 0.595 31.9209 3.86 168.1 23 46.0 9.2528 0.623 31.9226 3.88 168.8 27 47.0 9.2543 0.633 31.9243 3.89 169.7 28 48.0 9.2619 0.663 31.9346 3.90 170.0 27 49.0 9.2679 0.688 31.9431 3.90 169.7 23 50.0 9.2646 0.720 31.9504 3.88 169.2 25 51.0 9.2509 0.763 31.9552 3.87 168.4 26 52.0 9.2346 0.777 31.9593 3.85 167.5 27 53.0 9.2160 0.761 31.9620 3.83 166.9 25 54.0 9.1961 0.725 31.9650 3.82 166.2 23 55.0 9.1861 0.712 31.9661 3.80 165.5 24 56.0 9.1760 0.724 31.9673 3.78 164.5 26 57.0 9.1583 0.733 31.9691 3.75 163.4 29 58.0 9.1357 0.671 31.9719 3.72 161.9 27 59.0 9.1136 0.622 31.9754 3.69 160.6 23 60.0 9.0967 0.603 31.9801 3.66 159.4 23 61.0 9.0714 0.567 31.9900 3.64 158.6 23 62.0 9.0319 0.546 32.0010 3.63 158.1 25 63.0 9.0204 0.542 32.0127 3.61 157.0 27 64.0 8.9968 0.507 32.0263 3.58 155.8 31 65.0 8.9731 0.486 32.0367 3.53 153.9 27 66.0 8.9554 0.483 32.0442 3.48 151.6 25 67.0 8.9225 0.434 32.0578 3.44 149.8 24 68.0 8.8613 0.355 32.0891 3.43 149.3 21 69.0 8.8200 0.336 32.1272 3.42 149.2 21 70.0 8.8113 0.357 32.1361 3.42 149.1 20 71.0 8.8091 0.336 32.1387 3.42 149.2 28 72.0 8.8086 0.362 32.1395 3.42 149.1 37 73.0 8.8080 0.366 32.1404 3.42 148.8 26 74.0 8.8057 0.340 32.1433 3.41 148.6 22 75.0 8.8072 0.332 32.1418 3.39 147.9 23 76.0 8.8048 0.344 32.1443 3.37 146.6 24 77.0 8.7977 0.333 32.1507 3.34 145.4 24 78.0 8.7627 0.321 32.1820 3.32 144.6 22 79.0 8.7055 0.306 32.2336 3.32 144.5 17 80.0 8.6638 0.304 32.2721 3.31 144.3 22 81.0 8.6614 0.314 32.2747 3.31 144.2 29 82.0 8.6577 0.309 32.2798 3.30 143.9 35 83.0 8.6512 0.291 32.2862 3.30 143.7 25 84.0 8.6518 0.259 32.2866 3.30 143.5 24 85.0 8.6482 0.308 32.2896 3.29 143.3 27 86.0 8.6461 0.298 32.2911 3.28 142.7 26 87.0 8.6397 0.308 32.2958 3.25 141.6 21 88.0 8.6169 0.283 32.3101 3.23 140.8 21 89.0 8.5870 0.282 32.3300 3.20 139.5 26 90.0 8.5459 0.286 32.3542 3.17 138.1 27 91.0 8.5080 0.268 32.3783 3.14 136.7 23 92.0 8.4669 0.267 32.4099 3.12 135.8 19 93.0 8.4210 0.248 32.4442 3.11 135.3 20 94.0 8.3870 0.248 32.4706 3.10 134.9 23 95.0 8.3674 0.234 32.4853 3.08 134.1 30 96.0 8.3384 0.222 32.5065 3.06 133.3 33 97.0 8.3137 0.216 32.5253 3.05 132.8 22 98.0 8.2991 0.219 32.5374 3.04 132.5 18 99.0 8.2795 0.204 32.5547 3.04 132.4 19 100.0 8.2592 0.225 32.5715 3.04 132.2 21 101.0 8.2408 0.240 32.5878 3.04 132.1 28 102.0 8.2190 0.243 32.6067 3.09 134.4 30 103.0 8.1879 0.233 32.6341 3.21 139.9 26 104.0 8.1074 0.234 32.7173 3.43 149.4 24 105.0 8.0533 0.271 32.7855 3.64 158.5 22 106.0 8.0376 0.313 32.8501 3.80 165.3 22 107.0 8.0141 0.332 32.8787 3.87 168.4 23 108.0 7.9576 0.336 32.8992 3.87 168.6 26 109.0 7.9173 0.334 32.9114 3.88 168.8 26 110.0 7.8429 0.294 32.9411 3.91 170.1 26 111.0 7.8165 0.302 32.9523 3.93 170.9 25 112.0 7.8031 0.271 32.9618 3.87 168.4 23 113.0 7.7867 0.289 32.9752 3.82 166.3 21 114.0 7.7475 0.267 33.0011 3.80 165.4 21 115.0 7.7360 0.265 33.0156 3.77 164.2 26 116.0 7.7360 0.268 33.0185 3.74 162.9 32 117.0 7.7350 0.254 33.0244 3.73 162.2 26 118.0 7.7226 0.224 33.0374 3.74 162.9 26