*2013/12/16 15:38:35.89 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2012/08/08 19:44:55.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 79 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 674E2CA3 NUMBER OF CHANNELS : 7 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 3.938 81.56 2 Temperature:Primary 'deg C (ITS90)' 7.0471 10.7198 3 Fluorescence:URU:Wetlabs mg/m^3 0.124 7.091 4 Salinity:T0:C0 PSS-78 31.9146 33.5665 5 Oxygen:Dissolved:SBE mL/L 1.983 5.963 6 Oxygen:Dissolved:SBE umol/kg 86.25992 259.8349 7 Number_of_bin_records n/a 21 55 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 6 F ' ' 1 7 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2012-54\Pro $END *ADMINISTRATION MISSION : 2012-54 AGENCY : 'PBS, Marine Ecosystems and Aquaculture Division,' CONTINUED : ' Nanaimo, B.C.' COUNTRY : Canada PROJECT : Conservation Biology Herring Trawl Survey SCIENTIST : Boldt J. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : WCVI STATION : 5 EVENT NUMBER : 9 LATITUDE : 48 36.31000 N ! (deg min) LONGITUDE : 125 54.02000 W ! (deg min) WATER DEPTH : 88 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0443 $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.1.2 2012/11/03 14:49:11 7377 7377 CLEAN 5.0.4 2012/11/03 14:49:42 7377 7377 SHIFTDAT 3.4 2012/11/03 15:19:35 7377 7377 SHIFTDAT 3.4 2012/11/03 15:30:30 7377 7377 SHIFTDAT 3.4 2012/11/03 15:30:52 7377 7377 SHIFTDAT 3.4 2012/11/03 15:31:16 7377 7377 DELETE 6.3 2012/11/03 15:36:27 7377 2971 CTDEDIT 4.61 2012/11/03 16:41:02 2971 2825 CALIB 11.7 2012/11/05 07:59:09 2825 2825 FILTERS 4.3 2012/11/05 07:59:22 2825 2825 BINAVE 4.1.1 2012/11/05 07:59:30 2825 79 REMOVECH 8.1.1 2012/11/05 08:08:33 79 79 CHGUNITS 3.0 2012/11/05 08:09:21 79 79 REORDER 1.3 2012/11/05 08:09:49 ? ? HDREDIT2 2.5.1 2012/11/05 08:11:23 ? ? CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:38:35 79 79 $END $REMARKS -CLEAN functions: 2012/11/03 14:49:35 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:Wetlabs:ECO-AFL # of Records to Advance (-ve for Delay): At REC# 0 Shift= 12.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: pH:SBE # of Records to Advance (-ve for Delay): At REC# 0 Shift= 48.00 -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 71.75 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT 2012/11/03 16:41:02 146 records were deleted in this editing session. 35 changes in channel Salinity:T0:C0 -CALIB parameters: 2012/11/05 07:59:09 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2012-54\Processing\doc\2012-54-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 14 Oxygen:Dissolved:SBE mL/L 10 0.4800000E-01 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:Wetlabs:ECO-AFL Fluorescence:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2012/11/05 08:08:33 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] pH:SBE [pH Units] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2012/11/05 08:11:23 Applied edit header: P:\Cruise_Data_Processing\2012-54\Processing\doc\2012-54-HDR.TXT Channel 1: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: Salinity:Practical:T0:C0 [PSS-78] Name: Salinity:T0:C0 ==> Salinity:Practical:T0:C0 $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2012- Herring August Trawl\2012-54-009.hex Software Version Seasave V 7.21d Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Aug 08 2012 19:51:03 NMEA Latitude = 48 36.31 N NMEA Longitude = 125 54.02 W NMEA UTC (Time) = Aug 08 2012 19:44:55 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2012-51 Station: 5 Depth(m): 88 System UTC = Aug 08 2012 18:51:03 # nquan = 15 # nvalues = 7377 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity, Practical [PSU] # name 12 = sal11: Salinity, Practical, 2 [PSU] # name 13 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 14 = flag: flag # span 0 = 1, 7377 # span 1 = 2.635, 81.752 # span 2 = 7.0463, 11.2564 # span 3 = 7.0460, 11.2356 # span 4 = 3.405876, 3.614418 # span 5 = 3.405912, 3.613288 # span 6 = 0.0322, 12.8576 # span 7 = 1.0549, 2.6142 # span 8 = 8.382, 8.890 # span 9 = -1.075, 1.050 # span 10 = 0, 1 # span 11 = 31.8199, 33.5672 # span 12 = 31.8177, 33.5683 # span 13 = 1.91003, 6.55865 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Aug 08 2012 19:44:55 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 63507 # 12-Apr-11 # -4.435468e+004 # -1.845750e-001 # 1.192740e-002 # 3.979900e-002 # 0.000000e+000 # 2.993572e+001 # -3.336200e-004 # 3.759160e-006 # 1.565300e-009 # 0.99986626 # 5.62145 # 0.000000e+000 # 1.283280e-002 # -9.295010e+000 # # # # # # 2710 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.36717391e-003 # 6.46683268e-004 # 2.34981097e-005 # 2.22352352e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2128 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.01926507e+001 # 1.46093888e+000 # -2.51557628e-003 # 2.74924248e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # # # # # # # 0852 # 21-april-2012 # 4.6009 # 2.5060 # # # # # # # # # 0997 # 23-Apr-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.8010e-001 # -0.4816 # 1.4264e-003 # 2.8936e-005 # -9.0212e-007 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 1.5600 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2216 # June 2012 # 1.30000000e+001 # # 0.0427 # # # # datcnv_date = Nov 03 2012 14:12:55, 7.21d [datcnv_vars = 11] # datcnv_in = P:\Cruise_Data_Processing\2012-54\RAW\CTD\2012-54-0009.hex P:\Crui se_Data_Processing\2012-54\Processing\doc\2012-54-ctd-new.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = Nov 03 2012 14:14:10, 7.21d # wildedit_in = P:\Cruise_Data_Processing\2012-54\Processing\convert\2012-54-000 9.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Nov 03 2012 14:34:16, 7.21d # alignctd_in = P:\Cruise_Data_Processing\2012-54\Processing\wildedit\2012-54-00 09.cnv # alignctd_adv = sbeox0V 4.000 # celltm_date = Nov 03 2012 14:39:19, 7.21d # celltm_in = P:\Cruise_Data_Processing\2012-54\Processing\align\2012-54-0009.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 9.0000, 9.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Nov 03 2012 14:40:36, 7.21d [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2012-54\Processing\celltm\2012-54-0009.c nv P:\Cruise_Data_Processing\2012-54\Processing\doc\2012-54-ctd-new.xmlcon # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = yes # file_type = ascii END* CTDEDIT was used to remove some surface records and records corrupted by shed wakes; salinity was cleaned lightly. Data Processing Notes: ---------------------------------------------------------------------- Fluorescence data are nominal and unedited, except that some records were removed in editing temperature and salinity. There was no calibration sampling for dissolved oxygen, but the results of cruise 2012-01 were used to derive DO concentration. A small correction was later added based on negative DO values found during 2012-49 in the anoxic layer of Saanich Inlet. There was no calibration sampling for salinity, but the results of cruise 2012-01 in February 2012 suggest calibration drift is <0.001. The SBE pH sensor data has been removed from this file since there was no field calibration information available and there are concerns about how the sensor performs. For details on processing see processing report: 2012-54-proc.doc. ---------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.48E-01 1) $END !--1--- ---2---- ---3--- ---4---- --5--- --6-- -7-- !Pressu Temperat Fluores Salinity Oxygen Oxyge Numb !re ure: cence: :T0:C0 : n: er_o ! Primary URU: Dissol Disso ~bin ! Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- -------- ------ ----- ---- *END OF HEADER 3.9 10.3725 6.428 31.9146 5.86 255.4 31 5.1 10.5107 5.863 31.9873 5.85 255.1 27 6.0 10.5148 6.067 31.9910 5.96 259.8 31 7.0 10.5844 5.974 32.0136 5.95 259.4 32 8.0 10.7198 6.291 32.0563 5.85 254.8 42 9.0 10.6566 6.939 32.0710 5.77 251.4 36 10.0 10.5495 6.271 32.1061 5.69 248.0 32 11.0 10.4640 7.091 32.1217 5.63 245.3 35 12.0 10.4227 6.711 32.1278 5.54 241.5 32 13.0 10.3699 6.674 32.1389 5.41 235.5 34 14.0 10.2679 6.224 32.1619 5.09 221.8 34 15.0 10.1390 6.666 32.1840 4.54 197.9 35 16.0 9.6629 5.576 32.2827 4.15 180.9 41 17.0 9.1362 3.356 32.3983 4.00 174.4 32 18.0 9.0445 3.027 32.4344 3.87 168.4 30 19.0 8.9178 2.472 32.4877 3.76 163.6 33 20.0 8.7415 1.534 32.5419 3.65 158.8 35 21.0 8.6721 1.213 32.5614 3.53 153.6 29 22.0 8.4901 1.067 32.6166 3.45 150.4 29 23.0 8.4004 0.970 32.6541 3.35 145.8 32 24.0 8.2854 0.808 32.7066 3.23 140.7 39 25.0 8.1062 0.535 32.7865 3.16 137.5 42 26.0 8.0348 0.406 32.8190 3.12 135.7 37 27.0 8.0212 0.403 32.8250 3.08 134.2 30 28.0 8.0065 0.336 32.8288 3.07 133.6 28 29.0 7.9922 0.309 32.8333 3.06 133.0 31 30.0 7.9856 0.319 32.8385 3.04 132.5 40 31.0 7.9848 0.305 32.8400 3.03 132.1 31 32.0 7.9807 0.300 32.8415 3.02 131.4 32 33.0 7.9822 0.294 32.8423 2.99 130.2 36 34.0 7.9654 0.259 32.8458 2.96 129.0 31 35.0 7.9624 0.263 32.8468 2.94 128.0 33 36.0 7.9442 0.270 32.8532 2.92 127.0 37 37.0 7.9359 0.264 32.8564 2.88 125.3 31 38.0 7.9252 0.247 32.8615 2.85 124.0 32 39.0 7.8975 0.202 32.8753 2.84 123.7 35 40.0 7.8801 0.201 32.8923 2.85 123.8 39 41.0 7.8732 0.213 32.9004 2.86 124.6 37 42.0 7.8529 0.209 32.9286 2.89 125.9 31 43.0 7.8178 0.207 32.9762 2.90 126.1 35 44.0 7.8068 0.213 32.9881 2.90 126.2 35 45.0 7.8026 0.224 32.9930 2.90 126.3 35 46.0 7.7969 0.222 33.0001 2.90 126.1 39 47.0 7.7924 0.197 33.0060 2.90 126.2 39 48.0 7.7834 0.226 33.0144 2.91 126.5 37 49.0 7.7707 0.205 33.0331 2.90 126.1 30 50.0 7.7537 0.218 33.0499 2.88 125.3 32 51.0 7.7246 0.201 33.0718 2.86 124.4 36 52.0 7.6850 0.199 33.0997 2.84 123.6 36 53.0 7.6567 0.203 33.1200 2.84 123.5 42 54.0 7.6404 0.206 33.1368 2.83 123.2 36 55.0 7.6257 0.188 33.1508 2.81 122.4 36 56.0 7.6026 0.192 33.1703 2.79 121.2 44 57.0 7.5753 0.192 33.1926 2.74 119.1 33 58.0 7.5556 0.170 33.2063 2.68 116.7 32 59.0 7.4551 0.182 33.2921 2.66 116.0 38 60.0 7.4079 0.164 33.3347 2.66 115.7 37 61.0 7.4043 0.151 33.3398 2.66 115.6 36 62.0 7.4004 0.183 33.3443 2.65 115.4 55 63.0 7.3973 0.176 33.3480 2.64 114.9 39 64.0 7.3915 0.167 33.3544 2.63 114.5 37 65.0 7.3873 0.166 33.3586 2.62 114.1 37 66.0 7.3823 0.182 33.3604 2.60 113.3 30 67.0 7.3782 0.172 33.3660 2.58 112.4 34 68.0 7.3567 0.165 33.3859 2.51 109.2 48 69.0 7.3059 0.152 33.4095 2.44 106.3 34 70.0 7.2639 0.142 33.4296 2.40 104.5 39 71.0 7.2358 0.147 33.4518 2.35 102.1 38 72.0 7.1908 0.144 33.4793 2.31 100.5 33 73.0 7.1717 0.144 33.4911 2.29 99.7 41 74.0 7.1646 0.144 33.4956 2.28 99.2 46 75.0 7.1599 0.144 33.4994 2.26 98.1 38 76.0 7.1588 0.135 33.5005 2.18 94.9 37 77.0 7.1272 0.124 33.5195 2.13 92.5 33 78.0 7.1007 0.128 33.5337 2.09 90.8 34 79.0 7.0830 0.152 33.5438 2.07 90.2 36 79.9 7.0771 0.134 33.5474 2.07 89.8 36 81.1 7.0532 0.146 33.5626 1.98 86.3 49 81.6 7.0471 0.135 33.5665 1.99 86.3 21