*2013/12/16 15:38:35.83 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2012/08/05 13:59:39.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 68 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 125D7BB8 NUMBER OF CHANNELS : 7 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 5.287 71.825 2 Temperature:Primary 'deg C (ITS90)' 7.6317 10.9412 3 Fluorescence:URU:Wetlabs mg/m^3 0.188 4.409 4 Salinity:T0:C0 PSS-78 31.1193 33.1323 5 Oxygen:Dissolved:SBE mL/L 2.763 5.362 6 Oxygen:Dissolved:SBE umol/kg 120.2414 233.8181 7 Number_of_bin_records n/a 10 54 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 6 F ' ' 1 7 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2012-54\Pro $END *ADMINISTRATION MISSION : 2012-54 AGENCY : 'PBS, Marine Ecosystems and Aquaculture Division,' CONTINUED : ' Nanaimo, B.C.' COUNTRY : Canada PROJECT : Conservation Biology Herring Trawl Survey SCIENTIST : Boldt J. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : WCVI STATION : 3 EVENT NUMBER : 5 LATITUDE : 48 39.40000 N ! (deg min) LONGITUDE : 125 28.64000 W ! (deg min) WATER DEPTH : 67 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0443 $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.1.2 2012/11/03 14:49:07 5744 5744 CLEAN 5.0.4 2012/11/03 14:49:38 5744 5744 SHIFTDAT 3.4 2012/11/03 15:19:32 5744 5744 SHIFTDAT 3.4 2012/11/03 15:30:27 5744 5744 SHIFTDAT 3.4 2012/11/03 15:30:49 5744 5744 SHIFTDAT 3.4 2012/11/03 15:31:13 5744 5744 DELETE 6.3 2012/11/03 15:36:23 5744 1829 CTDEDIT 4.61 2012/11/03 16:23:48 1829 1692 CALIB 11.7 2012/11/05 07:59:08 1692 1692 FILTERS 4.3 2012/11/05 07:59:21 1692 1692 BINAVE 4.1.1 2012/11/05 07:59:29 1692 68 REMOVECH 8.1.1 2012/11/05 08:08:33 68 68 CHGUNITS 3.0 2012/11/05 08:09:21 68 68 REORDER 1.3 2012/11/05 08:09:48 ? ? HDREDIT2 2.5.1 2012/11/05 08:11:23 ? ? CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:38:35 68 68 $END $REMARKS -CLEAN functions: 2012/11/03 14:49:35 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:Wetlabs:ECO-AFL # of Records to Advance (-ve for Delay): At REC# 0 Shift= 12.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: pH:SBE # of Records to Advance (-ve for Delay): At REC# 0 Shift= 48.00 -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 62.69 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT 2012/11/03 16:23:48 137 records were deleted in this editing session. 40 changes in channel Salinity:T0:C0 -CALIB parameters: 2012/11/05 07:59:08 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2012-54\Processing\doc\2012-54-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 14 Oxygen:Dissolved:SBE mL/L 10 0.4800000E-01 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:Wetlabs:ECO-AFL Fluorescence:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2012/11/05 08:08:33 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] pH:SBE [pH Units] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2012/11/05 08:11:23 Applied edit header: P:\Cruise_Data_Processing\2012-54\Processing\doc\2012-54-HDR.TXT Channel 1: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: Salinity:Practical:T0:C0 [PSS-78] Name: Salinity:T0:C0 ==> Salinity:Practical:T0:C0 $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2012- Herring August Trawl\2012-54-005.hex Software Version Seasave V 7.21d Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Aug 05 2012 14:03:26 NMEA Latitude = 48 39.40 N NMEA Longitude = 125 28.64 W NMEA UTC (Time) = Aug 05 2012 13:59:39 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2012-51 Station: 3 Depth(m): 67 System UTC = Aug 05 2012 13:03:26 # nquan = 15 # nvalues = 5744 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity, Practical [PSU] # name 12 = sal11: Salinity, Practical, 2 [PSU] # name 13 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 14 = flag: flag # span 0 = 1, 5744 # span 1 = 3.282, 72.690 # span 2 = 7.6039, 11.2036 # span 3 = 7.5751, 11.1733 # span 4 = 3.407737, 3.529480 # span 5 = 3.407882, 3.528734 # span 6 = 0.0798, 6.8417 # span 7 = 1.2979, 2.3578 # span 8 = 8.436, 8.726 # span 9 = -1.551, 2.496 # span 10 = 0, 1 # span 11 = 31.0803, 33.1568 # span 12 = 31.0741, 33.1718 # span 13 = 2.68507, 5.87141 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Aug 05 2012 13:59:39 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 63507 # 12-Apr-11 # -4.435468e+004 # -1.845750e-001 # 1.192740e-002 # 3.979900e-002 # 0.000000e+000 # 2.993572e+001 # -3.336200e-004 # 3.759160e-006 # 1.565300e-009 # 0.99986626 # 5.62145 # 0.000000e+000 # 1.283280e-002 # -9.295010e+000 # # # # # # 2710 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.36717391e-003 # 6.46683268e-004 # 2.34981097e-005 # 2.22352352e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2128 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.01926507e+001 # 1.46093888e+000 # -2.51557628e-003 # 2.74924248e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # # # # # # # 0852 # 21-april-2012 # 4.6009 # 2.5060 # # # # # # # # # 0997 # 23-Apr-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.8010e-001 # -0.4816 # 1.4264e-003 # 2.8936e-005 # -9.0212e-007 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 1.5600 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2216 # June 2012 # 1.30000000e+001 # # 0.0427 # # # # datcnv_date = Nov 03 2012 14:12:53, 7.21d [datcnv_vars = 11] # datcnv_in = P:\Cruise_Data_Processing\2012-54\RAW\CTD\2012-54-0005.hex P:\Crui se_Data_Processing\2012-54\Processing\doc\2012-54-ctd-new.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = Nov 03 2012 14:14:09, 7.21d # wildedit_in = P:\Cruise_Data_Processing\2012-54\Processing\convert\2012-54-000 5.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Nov 03 2012 14:34:14, 7.21d # alignctd_in = P:\Cruise_Data_Processing\2012-54\Processing\wildedit\2012-54-00 05.cnv # alignctd_adv = sbeox0V 4.000 # celltm_date = Nov 03 2012 14:39:18, 7.21d # celltm_in = P:\Cruise_Data_Processing\2012-54\Processing\align\2012-54-0005.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 9.0000, 9.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Nov 03 2012 14:40:34, 7.21d [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2012-54\Processing\celltm\2012-54-0005.c nv P:\Cruise_Data_Processing\2012-54\Processing\doc\2012-54-ctd-new.xmlcon # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = yes # file_type = ascii END* CTDEDIT was used to remove some surface records and records corrupted by shed wakes; salinity was cleaned lightly. Data Processing Notes: ---------------------------------------------------------------------- Fluorescence data are nominal and unedited, except that some records were removed in editing temperature and salinity. There was no calibration sampling for dissolved oxygen, but the results of cruise 2012-01 were used to derive DO concentration. A small correction was later added based on negative DO values found during 2012-49 in the anoxic layer of Saanich Inlet. There was no calibration sampling for salinity, but the results of cruise 2012-01 in February 2012 suggest calibration drift is <0.001. The SBE pH sensor data has been removed from this file since there was no field calibration information available and there are concerns about how the sensor performs. For details on processing see processing report: 2012-54-proc.doc. ---------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.48E-01 1) $END !--1--- ---2---- ---3--- ---4---- --5--- --6-- -7-- !Pressu Temperat Fluores Salinity Oxygen Oxyge Numb !re ure: cence: :T0:C0 : n: er_o ! Primary URU: Dissol Disso ~bin ! Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- -------- ------ ----- ---- *END OF HEADER 5.3 10.9412 4.409 31.1193 5.36 233.8 10 6.0 10.8485 4.080 31.1282 5.23 227.9 21 7.0 10.7585 4.028 31.1562 5.06 220.5 22 8.0 10.5234 3.699 31.2178 4.99 217.6 25 9.0 10.2420 3.192 31.2467 4.99 217.7 27 10.0 10.1553 2.606 31.2720 4.90 213.7 31 11.0 10.1128 2.763 31.3143 4.69 204.5 30 12.0 10.0481 2.786 31.3337 4.48 195.2 24 13.0 9.9599 2.427 31.3581 4.38 190.8 22 14.0 9.7459 1.980 31.4060 4.36 189.9 21 15.0 9.6800 1.663 31.4512 4.31 187.8 24 16.0 9.6546 1.607 31.4707 4.14 180.7 30 17.0 9.6297 1.613 31.4809 3.89 169.5 29 18.0 9.4822 1.350 31.5150 3.77 164.4 22 19.0 9.2173 0.849 31.6160 3.75 163.3 20 20.0 9.1693 0.751 31.6445 3.74 162.9 22 21.0 9.1363 0.679 31.6754 3.78 164.9 37 21.9 9.0995 0.724 31.7373 3.78 164.5 32 23.0 9.1601 0.937 31.8354 3.67 159.9 19 24.0 9.0797 0.919 31.9404 3.63 158.1 17 25.0 8.8814 0.864 32.0383 3.61 157.3 21 26.0 8.8076 0.773 32.0825 3.59 156.3 30 27.0 8.7663 0.739 32.1197 3.56 155.1 32 28.0 8.7190 0.743 32.1625 3.52 153.3 27 29.0 8.6835 0.698 32.1937 3.47 151.2 26 30.0 8.6525 0.697 32.2200 3.42 149.0 24 31.0 8.5611 0.628 32.2991 3.39 147.6 22 32.0 8.4991 0.592 32.3538 3.37 146.9 21 33.0 8.4279 0.551 32.4193 3.36 146.5 24 34.0 8.3846 0.525 32.4601 3.35 146.0 27 35.0 8.3684 0.528 32.4768 3.35 145.8 28 36.0 8.3560 0.523 32.4935 3.33 145.2 26 37.0 8.3413 0.483 32.5110 3.32 144.5 24 38.0 8.3226 0.462 32.5328 3.30 143.7 21 39.0 8.2832 0.455 32.5835 3.29 143.4 20 40.0 8.2530 0.476 32.6157 3.29 143.2 19 41.0 8.2094 0.403 32.6721 3.30 143.7 29 42.0 8.1535 0.398 32.7951 3.25 141.5 38 42.9 8.1175 0.374 32.8690 3.16 137.4 19 44.0 8.0717 0.373 32.8884 3.12 135.9 15 45.0 8.0189 0.346 32.9073 3.11 135.2 14 46.0 7.9063 0.318 32.9609 3.10 135.0 15 47.1 7.8551 0.290 32.9884 3.09 134.6 26 48.0 7.8283 0.299 33.0053 3.06 133.2 46 49.0 7.7930 0.293 33.0297 3.03 132.0 22 50.0 7.7838 0.282 33.0357 3.02 131.3 18 51.0 7.7785 0.272 33.0398 3.01 131.0 18 52.0 7.7722 0.275 33.0438 3.00 130.5 21 53.0 7.7674 0.292 33.0471 2.97 129.3 23 54.0 7.7640 0.266 33.0494 2.95 128.4 25 55.0 7.7471 0.245 33.0593 2.93 127.6 28 56.0 7.7388 0.242 33.0643 2.91 126.8 33 57.0 7.7290 0.230 33.0697 2.90 126.0 29 58.0 7.7268 0.249 33.0711 2.88 125.3 23 59.0 7.7215 0.228 33.0740 2.87 124.7 22 60.0 7.7163 0.225 33.0765 2.86 124.3 22 61.0 7.7127 0.232 33.0783 2.85 124.1 22 62.0 7.7071 0.217 33.0811 2.84 123.8 23 63.0 7.7021 0.217 33.0836 2.84 123.6 28 64.0 7.7013 0.238 33.0841 2.84 123.5 34 65.0 7.6996 0.215 33.0849 2.83 123.0 34 66.0 7.6984 0.211 33.0859 2.82 122.9 25 67.0 7.6962 0.210 33.0874 2.82 122.9 21 68.0 7.6911 0.188 33.0912 2.82 122.7 19 69.0 7.6887 0.203 33.0937 2.81 122.5 24 70.1 7.6862 0.195 33.0956 2.79 121.5 54 71.0 7.6664 0.202 33.1098 2.76 120.2 26 71.8 7.6317 0.212 33.1323 2.77 120.4 14