*2013/12/16 15:38:35.73 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2012/08/02 07:51:45.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 88 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : B38BCD89 NUMBER OF CHANNELS : 7 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 4.387 90.756 2 Temperature:Primary 'deg C (ITS90)' 7.4825 12.4132 3 Fluorescence:URU:Wetlabs mg/m^3 0.131 16.912 4 Salinity:T0:C0 PSS-78 30.7166 33.2282 5 Oxygen:Dissolved:SBE mL/L 2.543 7.228 6 Oxygen:Dissolved:SBE umol/kg 110.6545 315.3656 7 Number_of_bin_records n/a 8 41 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 6 F ' ' 1 7 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2012-51\Pro $END *ADMINISTRATION MISSION : 2012-51 AGENCY : 'PBS, Marine Ecosystems and Aquaculture Division,' CONTINUED : ' Nanaimo, B.C.' COUNTRY : Canada PROJECT : Sardine Multi-species WCVI Night Trawl Survey SCIENTIST : McFarlane S. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : WCVI STATION : 40 EVENT NUMBER : 79 LATITUDE : 48 49.11000 N ! (deg min) LONGITUDE : 125 27.73000 W ! (deg min) WATER DEPTH : 98 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0443 $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.1.2 2012/11/01 09:58:28 6415 6415 CLEAN 5.0.4 2012/11/01 10:31:26 6415 6415 SHIFTDAT 3.4 2012/11/01 10:37:53 6415 6415 SHIFTDAT 3.4 2012/11/01 11:23:52 6415 6415 SHIFTDAT 3.4 2012/11/01 11:26:17 6415 6415 SHIFTDAT 3.4 2012/11/01 11:57:43 6415 6415 DELETE 6.3 2012/11/01 12:00:36 6415 2452 CTDEDIT 4.61 2012/11/02 15:26:09 2452 2324 CALIB 11.7 2012/11/02 15:33:35 2324 2324 FILTERS 4.3 2012/11/02 15:34:46 2324 2324 BINAVE 4.1.1 2012/11/02 15:35:22 2324 88 REMOVECH 8.1.1 2012/11/02 15:54:07 88 88 CHGUNITS 3.0 2012/11/02 15:55:02 88 88 REORDER 1.3 2012/11/02 15:55:31 ? ? HDREDIT2 2.5.1 2012/11/02 16:41:46 ? ? CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:38:35 88 88 $END $REMARKS -CLEAN functions: 2012/11/01 10:28:56 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:Wetlabs:ECO-AFL # of Records to Advance (-ve for Delay): At REC# 0 Shift= 12.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: pH:SBE # of Records to Advance (-ve for Delay): At REC# 0 Shift= 48.00 -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 81.49 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT 2012/11/02 15:26:09 128 records were deleted in this editing session. 26 changes in channel Salinity:T0:C0 -CALIB parameters: 2012/11/02 15:33:35 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2012-51\Processing\doc\2012-51-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 14 Oxygen:Dissolved:SBE mL/L 10 0.4800000E-01 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:Wetlabs:ECO-AFL Fluorescence:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2012/11/02 15:54:07 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] pH:SBE [pH Units] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2012/11/02 16:41:46 Applied edit header: P:\Cruise_Data_Processing\2012-51\Processing\doc\2012-51-HDR.TXT Channel 1: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: Salinity:Practical:T0:C0 [PSS-78] Name: Salinity:T0:C0 ==> Salinity:Practical:T0:C0 $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2012-51 sardine\2012-51-040.hex Software Version Seasave V 7.21d Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Aug 02 2012 07:54:18 NMEA Latitude = 48 49.11 N NMEA Longitude = 125 27.73 W NMEA UTC (Time) = Aug 02 2012 07:51:45 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2012-51 Station: 40 Depth(m): 98 System UTC = Aug 02 2012 06:54:18 # nquan = 15 # nvalues = 6415 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity, Practical [PSU] # name 12 = sal11: Salinity, Practical, 2 [PSU] # name 13 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 14 = flag: flag # span 0 = 1, 6415 # span 1 = 3.523, 91.490 # span 2 = 7.4802, 12.9814 # span 3 = 7.4801, 13.0204 # span 4 = 3.397082, 3.627275 # span 5 = 3.397223, 3.632935 # span 6 = 0.0322, 18.2703 # span 7 = 1.2247, 2.8852 # span 8 = 8.394, 8.939 # span 9 = -1.424, 1.207 # span 10 = 1, 1 # span 11 = 30.5705, 33.2327 # span 12 = 30.5683, 33.2339 # span 13 = 2.46257, 7.26584 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Aug 02 2012 07:51:45 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 63507 # 12-Apr-11 # -4.435468e+004 # -1.845750e-001 # 1.192740e-002 # 3.979900e-002 # 0.000000e+000 # 2.993572e+001 # -3.336200e-004 # 3.759160e-006 # 1.565300e-009 # 0.99986626 # 5.62145 # 0.000000e+000 # 1.283280e-002 # -9.295010e+000 # # # # # # 2710 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.36717391e-003 # 6.46683268e-004 # 2.34981097e-005 # 2.22352352e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2128 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.01926507e+001 # 1.46093888e+000 # -2.51557628e-003 # 2.74924248e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # # # # # # # 0852 # 21-april-2012 # 4.6009 # 2.5060 # # # # # # # # # 0997 # 23-Apr-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.8010e-001 # -0.4816 # 1.4264e-003 # 2.8936e-005 # -9.0212e-007 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 1.5600 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2216 # June 2012 # 1.30000000e+001 # # 0.0427 # # # # datcnv_date = Nov 01 2012 08:44:41, 7.21d [datcnv_vars = 11] # datcnv_in = P:\Cruise_Data_Processing\2012-51\RAW\CTD\2012-51-0040.hex P:\Crui se_Data_Processing\2012-51\Processing\doc\2012-51-ctd-new.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = Nov 01 2012 08:46:54, 7.21d # wildedit_in = P:\Cruise_Data_Processing\2012-51\Processing\convert\2012-51-004 0.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Nov 01 2012 09:05:15, 7.21d # alignctd_in = P:\Cruise_Data_Processing\2012-51\Processing\wildedit\2012-51-00 40.cnv # alignctd_adv = sbeox0V 4.000 # celltm_date = Nov 01 2012 09:23:20, 7.21d # celltm_in = P:\Cruise_Data_Processing\2012-51\Processing\align\2012-51-0040.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 9.0000, 9.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Nov 01 2012 09:24:56, 7.21d [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2012-51\Processing\celltm\2012-51-0040.c nv P:\Cruise_Data_Processing\2012-51\Processing\doc\2012-51-ctd-new.xmlcon # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = yes # file_type = ascii END* CTDEDIT was used to remove surface records and a few records corrupted by shed wakes; salinity was cleaned lightly. Data Processing Notes: ---------------------------------------------------------------------- Fluorescence data are nominal and unedited, except that some records were removed in editing temperature and salinity. There was no calibration sampling for dissolved oxygen, but the results of cruise 2012-01 were used to derive DO concentration. A small correction was later added based on negative DO values found during 2012-49 in the anoxic layer of Saanich Inlet. There was no calibration sampling for salinity, but the results of cruise 2012-01 in February 2012 suggest calibration drift is <0.001. The SBE pH sensor data has been removed from this file since there was no field calibration information available and there are concerns about how the sensor performs. For details on processing see processing report: 2012-49-proc.doc. ---------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.48E-01 1) $END !--1--- ---2---- ---3--- ---4---- --5--- --6-- -7-- !Pressu Temperat Fluores Salinity Oxygen Oxyge Numb !re ure: cence: :T0:C0 : n: er_o ! Primary URU: Dissol Disso ~bin ! Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- -------- ------ ----- ---- *END OF HEADER 4.4 12.4132 16.370 30.7166 7.23 315.4 8 5.0 12.3147 15.639 30.7367 7.09 309.4 38 6.0 12.0600 16.912 30.7858 6.30 274.9 41 7.0 11.7843 16.603 30.8413 5.74 250.6 24 8.0 11.0357 13.006 30.9717 5.63 245.4 25 9.0 10.6615 10.823 31.0619 5.54 241.7 28 10.0 10.5291 8.426 31.1015 5.34 232.9 24 11.0 10.4933 7.580 31.1115 5.07 221.2 26 12.0 10.3235 7.534 31.1616 4.93 215.1 26 13.0 10.0279 5.930 31.2517 4.80 209.4 27 14.0 9.9568 5.286 31.2733 4.64 202.2 27 15.0 9.8346 4.603 31.3156 4.50 196.3 30 16.0 9.6795 3.862 31.3672 4.41 192.4 29 17.0 9.6059 3.161 31.3858 4.35 189.7 25 18.0 9.5526 2.743 31.4055 4.24 184.9 23 19.0 9.5437 2.585 31.4170 4.07 177.4 23 20.0 9.5150 2.573 31.4301 3.90 169.9 26 21.0 9.3193 2.212 31.5176 3.76 163.9 37 22.0 9.1532 1.356 31.6080 3.69 160.7 30 23.0 9.0742 0.827 31.6674 3.66 159.5 20 24.0 9.0276 0.691 31.7102 3.63 158.3 21 25.0 9.0110 0.701 31.7244 3.59 156.3 21 26.0 8.9887 0.669 31.7423 3.54 154.2 29 27.0 8.8992 0.664 31.7951 3.50 152.3 35 28.0 8.8407 0.426 31.8314 3.47 151.1 32 29.0 8.8246 0.368 31.8369 3.45 150.3 20 30.0 8.8105 0.343 31.8488 3.44 150.1 22 31.0 8.8028 0.340 31.8602 3.44 149.9 22 32.0 8.7916 0.372 31.8749 3.43 149.7 27 33.0 8.7817 0.342 31.8910 3.42 148.9 29 34.0 8.7715 0.347 31.9052 3.40 148.0 27 35.0 8.7465 0.315 31.9314 3.37 146.7 25 36.0 8.7210 0.301 31.9559 3.35 145.9 25 37.0 8.6945 0.295 31.9746 3.35 145.9 25 38.0 8.6598 0.268 32.0094 3.36 146.5 27 39.0 8.6499 0.257 32.0231 3.37 146.7 27 40.0 8.6474 0.277 32.0312 3.37 146.8 26 41.0 8.6462 0.268 32.0354 3.37 146.8 25 42.0 8.6314 0.262 32.0632 3.38 147.0 21 43.0 8.6055 0.260 32.1045 3.36 146.5 26 44.0 8.6027 0.252 32.1097 3.33 144.8 28 45.0 8.5930 0.264 32.1175 3.26 142.2 28 46.0 8.5552 0.252 32.1539 3.20 139.6 26 47.0 8.4110 0.201 32.3180 3.18 138.3 25 48.0 8.3815 0.198 32.3768 3.16 137.7 27 49.0 8.3039 0.203 32.4428 3.16 137.6 29 50.0 8.2427 0.211 32.4882 3.14 136.9 27 51.0 8.2443 0.226 32.4934 3.11 135.6 24 52.0 8.2505 0.194 32.5001 3.08 134.1 23 53.0 8.2434 0.203 32.5254 3.06 133.2 21 54.0 8.1489 0.186 32.6175 3.05 133.0 27 55.0 8.1285 0.176 32.6373 3.05 132.7 27 56.0 8.1211 0.201 32.6440 3.04 132.4 27 57.0 8.1160 0.169 32.6489 3.04 132.3 28 58.0 8.1007 0.197 32.6620 3.04 132.3 29 59.0 8.0809 0.179 32.6777 3.05 132.6 26 60.0 8.0682 0.166 32.6867 3.05 132.8 26 61.0 8.0681 0.183 32.6872 3.05 132.6 25 62.0 8.0677 0.183 32.6876 3.04 132.3 26 63.0 8.0681 0.195 32.6880 3.03 131.7 25 64.0 8.0634 0.183 32.6937 3.00 130.8 23 65.0 8.0624 0.180 32.6990 2.98 129.9 24 66.0 8.0605 0.169 32.7111 2.97 129.3 25 67.0 8.0564 0.188 32.7186 2.96 128.8 26 68.0 8.0433 0.162 32.7345 2.95 128.6 26 69.0 8.0301 0.169 32.7480 2.95 128.6 26 70.0 8.0265 0.179 32.7514 2.95 128.2 23 71.0 8.0244 0.172 32.7539 2.95 128.3 24 72.0 8.0215 0.160 32.7568 2.97 129.3 28 73.0 8.0102 0.164 32.7641 3.01 131.2 28 74.0 7.9750 0.172 32.7839 3.06 133.2 28 75.0 7.9456 0.186 32.7977 3.07 133.7 27 76.0 7.9218 0.178 32.8069 3.04 132.1 26 77.0 7.9042 0.180 32.8267 2.98 129.5 24 78.0 7.8558 0.150 32.9043 2.90 126.4 22 79.0 7.8039 0.131 32.9512 2.80 122.0 21 80.0 7.7620 0.150 32.9883 2.70 117.7 23 81.0 7.6861 0.154 33.0630 2.64 115.0 30 82.0 7.6187 0.177 33.1278 2.61 113.6 39 83.0 7.5995 0.148 33.1411 2.58 112.4 32 84.0 7.5847 0.153 33.1515 2.59 112.6 25 85.0 7.5434 0.146 33.1817 2.59 112.9 25 86.0 7.5294 0.136 33.1908 2.59 112.9 25 87.0 7.5238 0.131 33.1951 2.58 112.4 28 88.0 7.5132 0.137 33.2037 2.56 111.5 30 89.0 7.4920 0.136 33.2202 2.55 111.0 29 90.0 7.4843 0.138 33.2264 2.54 110.7 26 90.8 7.4825 0.147 33.2282 2.54 110.7 12