*2013/12/16 15:38:35.12 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2012/07/27 12:23:05.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 96 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : A894DA01 NUMBER OF CHANNELS : 7 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 4.006 98.755 2 Temperature:Primary 'deg C (ITS90)' 7.8285 12.7373 3 Fluorescence:URU:Wetlabs mg/m^3 0.218 3.395 4 Salinity:T0:C0 PSS-78 30.4363 32.9155 5 Oxygen:Dissolved:SBE mL/L 2.136 6.832 6 Oxygen:Dissolved:SBE umol/kg 92.97131 298.1685 7 Number_of_bin_records n/a 17 41 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 6 F ' ' 1 7 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2012-51\Pro $END *ADMINISTRATION MISSION : 2012-51 AGENCY : 'PBS, Marine Ecosystems and Aquaculture Division,' CONTINUED : ' Nanaimo, B.C.' COUNTRY : Canada PROJECT : Sardine Multi-species WCVI Night Trawl Survey SCIENTIST : McFarlane S. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : WCVI STATION : 25 EVENT NUMBER : 49 LATITUDE : 48 53.73000 N ! (deg min) LONGITUDE : 125 44.89000 W ! (deg min) WATER DEPTH : 101 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0443 $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.1.2 2012/11/01 09:57:50 6739 6739 CLEAN 5.0.4 2012/11/01 10:30:47 6739 6739 SHIFTDAT 3.4 2012/11/01 10:37:14 6739 6739 SHIFTDAT 3.4 2012/11/01 11:23:13 6739 6739 SHIFTDAT 3.4 2012/11/01 11:25:37 6739 6739 SHIFTDAT 3.4 2012/11/01 11:57:03 6739 6739 DELETE 6.3 2012/11/01 12:00:03 6739 2522 CTDEDIT 4.61 2012/11/02 14:09:19 2522 2522 CALIB 11.7 2012/11/02 15:33:19 2522 2522 FILTERS 4.3 2012/11/02 15:34:31 2522 2522 BINAVE 4.1.1 2012/11/02 15:35:14 2522 96 REMOVECH 8.1.1 2012/11/02 15:54:06 96 96 CHGUNITS 3.0 2012/11/02 15:55:02 96 96 REORDER 1.3 2012/11/02 15:55:30 ? ? HDREDIT2 2.5.1 2012/11/02 16:41:45 ? ? CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:38:35 96 96 $END $REMARKS -CLEAN functions: 2012/11/01 10:28:56 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:Wetlabs:ECO-AFL # of Records to Advance (-ve for Delay): At REC# 0 Shift= 12.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: pH:SBE # of Records to Advance (-ve for Delay): At REC# 0 Shift= 48.00 -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 89.14 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT 2012/11/02 14:09:19 47 changes in channel Salinity:T0:C0 -CALIB parameters: 2012/11/02 15:33:19 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2012-51\Processing\doc\2012-51-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 14 Oxygen:Dissolved:SBE mL/L 10 0.4800000E-01 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:Wetlabs:ECO-AFL Fluorescence:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2012/11/02 15:54:06 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] pH:SBE [pH Units] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2012/11/02 16:41:45 Applied edit header: P:\Cruise_Data_Processing\2012-51\Processing\doc\2012-51-HDR.TXT Channel 1: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: Salinity:Practical:T0:C0 [PSS-78] Name: Salinity:T0:C0 ==> Salinity:Practical:T0:C0 $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2012-51 sardine\2012-51-025.hex Software Version Seasave V 7.21d Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jul 27 2012 12:26:29 NMEA Latitude = 48 53.73 N NMEA Longitude = 125 44.89 W NMEA UTC (Time) = Jul 27 2012 12:23:05 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2012-51 Station: 25 Depth(m): 101 System UTC = Jul 27 2012 11:26:29 # nquan = 15 # nvalues = 6739 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity, Practical [PSU] # name 12 = sal11: Salinity, Practical, 2 [PSU] # name 13 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 14 = flag: flag # span 0 = 1, 6739 # span 1 = 3.485, 99.140 # span 2 = 7.8277, 12.7386 # span 3 = 7.8276, 12.7387 # span 4 = 3.415028, 3.592368 # span 5 = 3.415122, 3.592626 # span 6 = 0.0957, 8.6512 # span 7 = 1.1160, 2.7375 # span 8 = 8.292, 8.739 # span 9 = -1.354, 1.365 # span 10 = 0, 1 # span 11 = 30.3407, 32.9162 # span 12 = 30.3357, 32.9178 # span 13 = 2.07981, 6.79129 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Jul 27 2012 12:23:05 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 63507 # 12-Apr-11 # -4.435468e+004 # -1.845750e-001 # 1.192740e-002 # 3.979900e-002 # 0.000000e+000 # 2.993572e+001 # -3.336200e-004 # 3.759160e-006 # 1.565300e-009 # 0.99986626 # 5.62145 # 0.000000e+000 # 1.283280e-002 # -9.295010e+000 # # # # # # 2710 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.36717391e-003 # 6.46683268e-004 # 2.34981097e-005 # 2.22352352e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2128 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.01926507e+001 # 1.46093888e+000 # -2.51557628e-003 # 2.74924248e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # # # # # # # 0852 # 21-april-2012 # 4.6009 # 2.5060 # # # # # # # # # 0997 # 23-Apr-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.8010e-001 # -0.4816 # 1.4264e-003 # 2.8936e-005 # -9.0212e-007 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 1.5600 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2216 # June 2012 # 1.30000000e+001 # # 0.0427 # # # # datcnv_date = Nov 01 2012 08:44:21, 7.21d [datcnv_vars = 11] # datcnv_in = P:\Cruise_Data_Processing\2012-51\RAW\CTD\2012-51-0025.hex P:\Crui se_Data_Processing\2012-51\Processing\doc\2012-51-ctd-new.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = Nov 01 2012 08:46:43, 7.21d # wildedit_in = P:\Cruise_Data_Processing\2012-51\Processing\convert\2012-51-002 5.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Nov 01 2012 09:05:02, 7.21d # alignctd_in = P:\Cruise_Data_Processing\2012-51\Processing\wildedit\2012-51-00 25.cnv # alignctd_adv = sbeox0V 4.000 # celltm_date = Nov 01 2012 09:23:09, 7.21d # celltm_in = P:\Cruise_Data_Processing\2012-51\Processing\align\2012-51-0025.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 9.0000, 9.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Nov 01 2012 09:24:43, 7.21d [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2012-51\Processing\celltm\2012-51-0025.c nv P:\Cruise_Data_Processing\2012-51\Processing\doc\2012-51-ctd-new.xmlcon # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = yes # file_type = ascii END* CTDEDIT was used to clean salinity. Data Processing Notes: ---------------------------------------------------------------------- Fluorescence data are nominal and unedited, except that some records were removed in editing temperature and salinity. There was no calibration sampling for dissolved oxygen, but the results of cruise 2012-01 were used to derive DO concentration. A small correction was later added based on negative DO values found during 2012-49 in the anoxic layer of Saanich Inlet. There was no calibration sampling for salinity, but the results of cruise 2012-01 in February 2012 suggest calibration drift is <0.001. The SBE pH sensor data has been removed from this file since there was no field calibration information available and there are concerns about how the sensor performs. For details on processing see processing report: 2012-49-proc.doc. ---------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.48E-01 1) $END !--1--- ---2---- ---3--- ---4---- --5--- --6-- -7-- !Pressu Temperat Fluores Salinity Oxygen Oxyge Numb !re ure: cence: :T0:C0 : n: er_o ! Primary URU: Dissol Disso ~bin ! Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- -------- ------ ----- ---- *END OF HEADER 4.0 12.7357 1.413 30.4365 6.83 298.2 29 5.0 12.7373 1.444 30.4363 6.81 297.3 26 6.0 12.7364 1.403 30.4365 6.75 294.4 26 7.0 12.7370 1.381 30.4364 6.66 290.7 26 8.0 12.7203 1.539 30.4367 6.53 284.9 24 9.0 12.5065 1.348 30.4379 6.42 280.2 26 10.0 12.3365 1.401 30.4390 6.38 278.6 29 11.0 11.8902 0.994 30.4499 6.40 279.2 29 12.0 11.5730 0.935 30.4909 6.39 279.0 26 13.0 11.5320 0.974 30.4957 6.38 278.2 22 14.0 11.4773 1.098 30.5283 6.35 277.0 21 15.0 11.3888 0.943 30.5476 6.29 274.5 23 16.0 11.3093 1.069 30.5736 6.12 267.1 28 17.0 11.2799 0.989 30.5897 5.88 256.4 31 18.0 11.1638 1.257 30.6556 5.72 249.4 22 19.0 10.9872 2.397 30.7308 5.62 245.3 21 20.0 10.7517 3.395 30.8444 5.54 241.6 21 21.0 10.6189 2.691 30.9114 5.41 235.8 28 22.0 10.4877 3.257 30.9670 5.22 227.6 32 23.0 10.3064 2.787 31.0577 5.02 218.7 25 24.0 10.1568 2.726 31.1551 4.82 210.3 22 25.0 9.9889 2.193 31.2662 4.67 203.8 25 26.0 9.7788 1.249 31.3862 4.53 197.6 26 27.0 9.6255 1.548 31.4746 4.40 191.7 28 28.0 9.5052 0.986 31.5630 4.31 187.7 25 29.0 9.3434 0.561 31.7103 4.27 186.2 22 30.0 9.2771 0.503 31.7611 4.25 185.3 23 31.0 9.2481 0.392 31.7796 4.22 183.7 27 32.0 9.2363 0.445 31.7877 4.17 181.7 29 33.0 9.2019 0.415 31.8110 4.13 179.9 26 34.0 9.1650 0.530 31.8312 4.09 178.0 23 35.0 9.1476 0.413 31.8405 4.03 175.7 22 36.0 9.1230 0.446 31.8563 3.98 173.2 26 37.0 9.0748 0.403 31.8939 3.90 169.9 31 38.0 9.0385 0.394 31.9263 3.85 167.9 28 39.0 8.9843 0.477 31.9725 3.84 167.1 24 40.0 8.9718 0.431 31.9842 3.82 166.3 26 41.0 8.9642 0.334 31.9923 3.78 164.8 28 42.0 8.9536 0.307 32.0021 3.70 161.4 26 43.0 8.9278 0.365 32.0198 3.61 157.1 24 44.0 8.8683 0.292 32.0574 3.53 153.8 22 45.0 8.7985 0.332 32.1021 3.48 151.5 24 46.0 8.7365 0.369 32.1445 3.44 149.9 29 47.0 8.7002 0.333 32.1649 3.42 149.0 27 48.0 8.6790 0.279 32.1753 3.40 148.3 22 49.0 8.6740 0.267 32.1781 3.38 147.3 22 50.0 8.6595 0.289 32.1866 3.36 146.1 29 51.0 8.6391 0.315 32.2023 3.33 145.0 38 52.0 8.6265 0.275 32.2121 3.29 143.5 22 53.0 8.6139 0.322 32.2229 3.28 142.8 19 54.0 8.6032 0.347 32.2322 3.26 142.1 21 55.1 8.5926 0.286 32.2413 3.24 141.2 34 56.0 8.5839 0.317 32.2489 3.20 139.5 36 57.0 8.5674 0.364 32.2643 3.16 137.5 22 58.0 8.5556 0.342 32.2780 3.14 136.7 20 59.0 8.5306 0.324 32.3061 3.13 136.4 23 60.0 8.5264 0.323 32.3099 3.12 136.1 27 61.0 8.5241 0.301 32.3120 3.11 135.5 29 62.0 8.5231 0.301 32.3130 3.09 134.5 31 63.0 8.5152 0.330 32.3196 3.06 133.2 28 64.0 8.5078 0.280 32.3254 3.04 132.4 26 65.0 8.4932 0.269 32.3337 3.04 132.3 25 66.0 8.4751 0.231 32.3476 3.04 132.2 26 67.0 8.4574 0.261 32.3649 3.04 132.2 27 68.0 8.4482 0.233 32.3730 3.02 131.6 30 69.0 8.4377 0.245 32.3804 2.99 130.1 29 70.0 8.4160 0.279 32.3968 2.95 128.4 24 71.0 8.3900 0.294 32.4173 2.92 127.0 23 72.0 8.3660 0.278 32.4367 2.88 125.6 26 73.0 8.3447 0.312 32.4543 2.84 123.4 29 74.0 8.3225 0.282 32.4720 2.78 121.1 26 75.0 8.2867 0.246 32.4992 2.74 119.5 22 76.0 8.2560 0.218 32.5226 2.72 118.6 18 77.0 8.2316 0.236 32.5436 2.70 117.7 23 78.0 8.2125 0.239 32.5591 2.68 116.7 29 79.0 8.2045 0.226 32.5688 2.65 115.3 30 80.0 8.1856 0.253 32.5858 2.64 114.8 26 81.0 8.1686 0.257 32.6004 2.64 114.8 26 82.0 8.1689 0.227 32.6005 2.63 114.5 27 83.0 8.1697 0.263 32.6003 2.62 113.9 29 84.0 8.1657 0.242 32.6045 2.60 113.3 31 85.0 8.1577 0.257 32.6122 2.59 112.9 32 86.0 8.1505 0.243 32.6190 2.58 112.5 27 87.0 8.1480 0.259 32.6217 2.58 112.1 22 88.0 8.1469 0.264 32.6227 2.56 111.6 25 89.0 8.1446 0.243 32.6260 2.55 111.0 34 90.0 8.1397 0.240 32.6304 2.53 110.3 32 91.0 8.1284 0.245 32.6405 2.52 109.7 22 92.0 8.1210 0.258 32.6468 2.50 109.0 22 93.0 8.1119 0.260 32.6554 2.46 106.9 26 94.0 8.1011 0.244 32.6650 2.34 101.8 41 94.9 8.0226 0.276 32.7398 2.23 97.0 30 96.0 7.9712 0.325 32.7881 2.17 94.3 25 97.0 7.9171 0.349 32.8375 2.14 93.2 24 98.0 7.8411 0.323 32.9050 2.14 93.1 27 98.8 7.8285 0.336 32.9155 2.14 93.0 17