*2013/12/16 15:38:34.72 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2012/07/25 02:55:16.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 113 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 9D93F335 NUMBER OF CHANNELS : 7 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 4.199 115.589 2 Temperature:Primary 'deg C (ITS90)' 6.7832 14.0046 3 Fluorescence:URU:Wetlabs mg/m^3 0.32E-01 3.764 4 Salinity:T0:C0 PSS-78 31.5469 33.8642 5 Oxygen:Dissolved:SBE mL/L 1.423 6.908 6 Oxygen:Dissolved:SBE umol/kg 61.88406 301.3062 7 Number_of_bin_records n/a 17 68 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 6 F ' ' 1 7 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2012-51\Pro $END *ADMINISTRATION MISSION : 2012-51 AGENCY : 'PBS, Marine Ecosystems and Aquaculture Division,' CONTINUED : ' Nanaimo, B.C.' COUNTRY : Canada PROJECT : Sardine Multi-species WCVI Night Trawl Survey SCIENTIST : McFarlane S. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : WCVI STATION : 18 EVENT NUMBER : 35 LATITUDE : 49 9.74000 N ! (deg min) LONGITUDE : 126 38.78000 W ! (deg min) WATER DEPTH : 128 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0443 $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.1.2 2012/11/01 09:57:22 8224 8224 CLEAN 5.0.4 2012/11/01 10:30:15 8224 8224 SHIFTDAT 3.4 2012/11/01 10:36:43 8224 8224 SHIFTDAT 3.4 2012/11/01 11:22:43 8224 8224 SHIFTDAT 3.4 2012/11/01 11:25:08 8224 8224 SHIFTDAT 3.4 2012/11/01 11:56:32 8224 8224 DELETE 6.3 2012/11/01 11:59:40 8224 3365 CTDEDIT 4.61 2012/11/02 13:13:16 3365 3251 CALIB 11.7 2012/11/02 15:33:07 3251 3251 FILTERS 4.3 2012/11/02 15:34:19 3251 3251 BINAVE 4.1.1 2012/11/02 15:35:07 3251 113 REMOVECH 8.1.1 2012/11/02 15:54:06 113 113 CHGUNITS 3.0 2012/11/02 15:55:01 113 113 REORDER 1.3 2012/11/02 15:55:30 ? ? HDREDIT2 2.5.1 2012/11/02 16:41:45 ? ? CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:38:34 113 113 $END $REMARKS -CLEAN functions: 2012/11/01 10:28:56 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:Wetlabs:ECO-AFL # of Records to Advance (-ve for Delay): At REC# 0 Shift= 12.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: pH:SBE # of Records to Advance (-ve for Delay): At REC# 0 Shift= 48.00 -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 105.80 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT 2012/11/02 13:13:16 114 records were deleted in this editing session. 7 changes in channel Salinity:T0:C0 -CALIB parameters: 2012/11/02 15:33:07 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2012-51\Processing\doc\2012-51-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 14 Oxygen:Dissolved:SBE mL/L 10 0.4800000E-01 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:Wetlabs:ECO-AFL Fluorescence:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2012/11/02 15:54:06 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] pH:SBE [pH Units] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2012/11/02 16:41:45 Applied edit header: P:\Cruise_Data_Processing\2012-51\Processing\doc\2012-51-HDR.TXT Channel 1: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: Salinity:Practical:T0:C0 [PSS-78] Name: Salinity:T0:C0 ==> Salinity:Practical:T0:C0 $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2012-51 sardine\2012-51-018.hex Software Version Seasave V 7.21d Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jul 25 2012 02:59:12 NMEA Latitude = 49 09.74 N NMEA Longitude = 126 38.78 W NMEA UTC (Time) = Jul 25 2012 02:55:16 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2012-51 Station: 16 Depth(m): 128 System UTC = Jul 25 2012 01:59:12 # nquan = 15 # nvalues = 8224 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity, Practical [PSU] # name 12 = sal11: Salinity, Practical, 2 [PSU] # name 13 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 14 = flag: flag # span 0 = 1, 8224 # span 1 = 2.388, 115.798 # span 2 = 6.7827, 14.1109 # span 3 = 6.7830, 14.1093 # span 4 = 3.368328, 3.830210 # span 5 = 3.368388, 3.830138 # span 6 = -0.0472, 4.5719 # span 7 = 0.8755, 2.8437 # span 8 = 8.207, 8.911 # span 9 = -1.627, 1.495 # span 10 = 0, 1 # span 11 = 31.4916, 33.8652 # span 12 = 31.4829, 33.8656 # span 13 = 1.30652, 7.12661 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Jul 25 2012 02:55:16 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 63507 # 12-Apr-11 # -4.435468e+004 # -1.845750e-001 # 1.192740e-002 # 3.979900e-002 # 0.000000e+000 # 2.993572e+001 # -3.336200e-004 # 3.759160e-006 # 1.565300e-009 # 0.99986626 # 5.62145 # 0.000000e+000 # 1.283280e-002 # -9.295010e+000 # # # # # # 2710 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.36717391e-003 # 6.46683268e-004 # 2.34981097e-005 # 2.22352352e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2128 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.01926507e+001 # 1.46093888e+000 # -2.51557628e-003 # 2.74924248e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # # # # # # # 0852 # 21-april-2012 # 4.6009 # 2.5060 # # # # # # # # # 0997 # 23-Apr-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.8010e-001 # -0.4816 # 1.4264e-003 # 2.8936e-005 # -9.0212e-007 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 1.5600 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2216 # June 2012 # 1.30000000e+001 # # 0.0427 # # # # datcnv_date = Nov 01 2012 08:44:07, 7.21d [datcnv_vars = 11] # datcnv_in = P:\Cruise_Data_Processing\2012-51\RAW\CTD\2012-51-0018.hex P:\Crui se_Data_Processing\2012-51\Processing\doc\2012-51-ctd-new.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = Nov 01 2012 08:46:35, 7.21d # wildedit_in = P:\Cruise_Data_Processing\2012-51\Processing\convert\2012-51-001 8.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Nov 01 2012 09:04:53, 7.21d # alignctd_in = P:\Cruise_Data_Processing\2012-51\Processing\wildedit\2012-51-00 18.cnv # alignctd_adv = sbeox0V 4.000 # celltm_date = Nov 01 2012 09:23:01, 7.21d # celltm_in = P:\Cruise_Data_Processing\2012-51\Processing\align\2012-51-0018.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 9.0000, 9.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Nov 01 2012 09:24:33, 7.21d [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2012-51\Processing\celltm\2012-51-0018.c nv P:\Cruise_Data_Processing\2012-51\Processing\doc\2012-51-ctd-new.xmlcon # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = yes # file_type = ascii END* CTDEDIT was used to remove surface records and a few records corrupted by shed wakes; salinity was cleaned lightly. Data Processing Notes: ---------------------------------------------------------------------- Fluorescence data are nominal and unedited, except that some records were removed in editing temperature and salinity. There was no calibration sampling for dissolved oxygen, but the results of cruise 2012-01 were used to derive DO concentration. A small correction was later added based on negative DO values found during 2012-49 in the anoxic layer of Saanich Inlet. There was no calibration sampling for salinity, but the results of cruise 2012-01 in February 2012 suggest calibration drift is <0.001. The SBE pH sensor data has been removed from this file since there was no field calibration information available and there are concerns about how the sensor performs. For details on processing see processing report: 2012-49-proc.doc. ---------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.48E-01 1) $END !--1--- ---2---- ---3--- ---4---- --5--- --6-- -7-- !Pressu Temperat Fluores Salinity Oxygen Oxyge Numb !re ure: cence: :T0:C0 : n: er_o ! Primary URU: Dissol Disso ~bin ! Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- -------- ------ ----- ---- *END OF HEADER 4.2 14.0046 3.346 31.5469 6.91 301.3 24 5.1 13.9093 3.436 31.5576 6.91 301.3 58 6.0 13.8069 3.490 31.5611 6.88 300.0 32 7.0 13.6867 3.542 31.5679 6.80 296.4 61 8.0 13.1877 3.581 31.6674 6.62 288.5 38 9.0 13.1686 3.764 31.6583 6.43 280.4 32 10.0 12.3772 3.736 31.8557 6.43 280.4 33 11.0 11.5926 3.384 32.0293 6.48 282.6 33 12.0 11.1119 2.942 32.1307 6.54 284.8 28 13.0 10.9810 2.892 32.1608 6.55 285.4 27 14.0 10.9239 2.844 32.1713 6.55 285.4 26 15.0 10.8804 2.813 32.1792 6.53 284.4 25 16.0 10.8513 2.783 32.1852 6.48 282.2 29 17.0 10.8325 2.764 32.1898 6.38 277.8 35 18.0 10.7211 2.681 32.2102 6.23 271.3 32 19.0 10.5028 2.540 32.2525 5.93 258.5 29 20.0 10.3732 2.458 32.2748 5.61 244.5 27 21.0 9.9501 2.242 32.3425 5.44 236.8 26 22.0 9.2253 1.881 32.4742 5.41 235.6 25 23.0 8.6158 1.582 32.5864 5.45 237.4 25 24.0 8.3982 1.503 32.6246 5.47 238.0 28 25.0 8.2974 1.424 32.6412 5.47 238.4 27 26.0 8.2123 1.350 32.6574 5.48 238.5 25 27.0 8.0846 1.282 32.6807 5.50 239.6 26 28.0 7.9563 1.178 32.7120 5.54 241.0 30 29.0 7.8249 1.036 32.7417 5.55 241.8 26 30.0 7.7711 0.975 32.7564 5.56 242.0 25 31.0 7.7476 0.937 32.7629 5.55 241.4 24 32.0 7.7286 0.848 32.7723 5.54 241.1 25 33.0 7.7082 0.750 32.7862 5.53 240.8 26 34.0 7.6816 0.749 32.7980 5.53 240.8 32 35.0 7.6632 0.693 32.8046 5.57 242.4 28 36.0 7.6154 0.673 32.8166 5.64 245.4 25 37.0 7.5660 0.595 32.8189 5.71 248.4 28 38.0 7.4874 0.475 32.8190 5.66 246.5 29 39.0 7.4065 0.363 32.8412 5.49 238.8 29 40.0 7.4294 0.332 32.8625 5.34 232.3 20 41.0 7.4538 0.334 32.8852 5.32 231.8 19 42.0 7.4701 0.285 32.9359 5.32 231.7 23 43.1 7.4084 0.180 32.9899 5.28 229.6 32 43.9 7.3947 0.147 33.0237 5.23 227.7 32 45.0 7.3976 0.135 33.0324 5.20 226.4 20 46.0 7.3970 0.148 33.0400 5.19 225.9 17 47.0 7.3956 0.132 33.0494 5.18 225.5 24 48.0 7.3821 0.104 33.0721 5.16 224.5 49 48.9 7.3756 0.110 33.0833 5.06 220.1 25 50.0 7.3675 0.100 33.1008 4.98 216.6 17 51.0 7.3456 0.078 33.1334 4.91 213.8 18 52.1 7.3327 0.097 33.1856 4.84 210.6 23 53.0 7.3341 0.073 33.2121 4.73 205.8 39 53.9 7.3373 0.060 33.2385 4.64 202.1 27 55.0 7.3403 0.055 33.2480 4.63 201.4 19 56.0 7.3423 0.071 33.2528 4.59 199.9 18 57.0 7.3399 0.065 33.2720 4.53 197.0 24 58.0 7.3359 0.041 33.3070 4.36 189.7 42 59.0 7.3350 0.040 33.3246 4.03 175.3 28 60.0 7.3246 0.043 33.3641 3.78 164.4 21 61.0 7.3061 0.051 33.4090 3.64 158.5 24 62.0 7.2984 0.049 33.4299 3.50 152.4 26 63.0 7.2980 0.058 33.4429 3.32 144.3 23 64.0 7.3012 0.049 33.4572 3.16 137.6 22 65.0 7.3015 0.037 33.4954 3.09 134.3 24 66.0 7.2892 0.054 33.5231 3.05 132.6 27 67.0 7.2724 0.042 33.5359 3.02 131.3 33 68.0 7.2656 0.050 33.5411 3.01 131.1 27 69.0 7.2643 0.039 33.5423 3.00 130.3 26 70.0 7.2646 0.037 33.5425 2.92 127.2 28 71.0 7.2615 0.042 33.5478 2.82 122.5 26 72.0 7.2438 0.034 33.5710 2.75 119.5 20 73.0 7.2382 0.042 33.6040 2.70 117.6 22 74.0 7.2322 0.049 33.6250 2.68 116.7 26 75.0 7.2336 0.052 33.6424 2.68 116.7 39 76.0 7.2178 0.049 33.6611 2.62 114.0 29 77.0 7.2128 0.051 33.6759 2.51 109.2 24 78.0 7.1745 0.041 33.6882 2.46 107.0 31 79.0 7.1492 0.032 33.6957 2.39 104.0 41 80.0 7.1431 0.034 33.7018 2.28 99.1 23 81.0 7.1156 0.064 33.7115 2.22 96.7 17 82.0 7.0844 0.047 33.7221 2.18 94.9 17 83.0 7.0635 0.066 33.7334 2.14 93.2 19 84.1 7.0267 0.057 33.7509 2.04 88.8 42 84.9 6.9924 0.056 33.7658 1.85 80.5 40 86.0 6.9403 0.052 33.7851 1.76 76.7 23 87.0 6.9253 0.039 33.7913 1.73 75.1 21 88.0 6.9074 0.054 33.8009 1.70 73.9 23 89.0 6.8883 0.054 33.8111 1.63 71.1 30 90.0 6.8638 0.058 33.8249 1.53 66.5 41 91.0 6.8311 0.067 33.8455 1.46 63.5 23 92.0 6.8253 0.066 33.8489 1.44 62.8 18 93.0 6.8177 0.065 33.8530 1.44 62.6 18 94.0 6.8135 0.057 33.8549 1.44 62.5 22 95.0 6.8101 0.082 33.8563 1.43 62.3 35 96.0 6.8094 0.065 33.8568 1.43 62.3 37 97.0 6.8091 0.076 33.8571 1.43 62.1 29 98.0 6.8088 0.080 33.8575 1.42 61.9 22 99.0 6.8084 0.059 33.8578 1.42 61.9 24 100.0 6.8081 0.069 33.8581 1.43 62.1 26 101.0 6.8071 0.062 33.8585 1.46 63.3 29 102.0 6.8055 0.073 33.8589 1.52 66.3 28 103.0 6.7977 0.069 33.8601 1.56 67.8 25 104.0 6.7897 0.077 33.8614 1.57 68.3 35 105.0 6.7892 0.066 33.8615 1.58 68.5 32 106.0 6.7885 0.043 33.8617 1.58 68.5 27 107.0 6.7883 0.056 33.8618 1.58 68.5 27 108.0 6.7880 0.054 33.8620 1.58 68.5 30 109.0 6.7880 0.082 33.8621 1.58 68.5 31 110.0 6.7880 0.073 33.8622 1.57 68.3 28 111.1 6.7881 0.057 33.8621 1.56 67.8 43 111.9 6.7869 0.066 33.8626 1.55 67.6 45 113.0 6.7866 0.079 33.8628 1.55 67.2 27 114.1 6.7853 0.076 33.8633 1.54 67.1 41 115.2 6.7840 0.063 33.8640 1.53 66.4 68 115.6 6.7832 0.065 33.8642 1.51 65.7 39