*2013/12/16 15:38:34.58 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2012/07/24 07:04:05.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 123 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 7163C60C NUMBER OF CHANNELS : 7 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 4.975 127.095 2 Temperature:Primary 'deg C (ITS90)' 6.6945 13.1691 3 Fluorescence:URU:Wetlabs mg/m^3 0.24E-01 6.184 4 Salinity:T0:C0 PSS-78 31.0353 33.8697 5 Oxygen:Dissolved:SBE mL/L 1.869 6.5 6 Oxygen:Dissolved:SBE umol/kg 81.27798 283.5738 7 Number_of_bin_records n/a 17 98 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 6 F ' ' 1 7 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2012-51\Pro $END *ADMINISTRATION MISSION : 2012-51 AGENCY : 'PBS, Marine Ecosystems and Aquaculture Division,' CONTINUED : ' Nanaimo, B.C.' COUNTRY : Canada PROJECT : Sardine Multi-species WCVI Night Trawl Survey SCIENTIST : McFarlane S. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : WCVI STATION : 16 EVENT NUMBER : 31 LATITUDE : 49 23.85000 N ! (deg min) LONGITUDE : 126 55.99000 W ! (deg min) WATER DEPTH : 136 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0443 $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.1.2 2012/11/01 09:57:10 10918 10918 CLEAN 5.0.4 2012/11/01 10:30:02 10918 10918 SHIFTDAT 3.4 2012/11/01 10:36:31 10918 10918 SHIFTDAT 3.4 2012/11/01 11:22:30 10918 10918 SHIFTDAT 3.4 2012/11/01 11:24:55 10918 10918 SHIFTDAT 3.4 2012/11/01 11:56:20 10918 10918 DELETE 6.3 2012/11/01 11:59:31 10918 3477 CTDEDIT 4.61 2012/11/02 12:15:18 3477 3202 CALIB 11.7 2012/11/02 15:33:01 3202 3202 FILTERS 4.3 2012/11/02 15:34:14 3202 3202 BINAVE 4.1.1 2012/11/02 15:35:04 3202 123 REMOVECH 8.1.1 2012/11/02 15:54:06 123 123 CHGUNITS 3.0 2012/11/02 15:55:01 123 123 REORDER 1.3 2012/11/02 15:55:30 ? ? HDREDIT2 2.5.1 2012/11/02 16:41:45 ? ? CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:38:34 123 123 $END $REMARKS -CLEAN functions: 2012/11/01 10:28:56 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:Wetlabs:ECO-AFL # of Records to Advance (-ve for Delay): At REC# 0 Shift= 12.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: pH:SBE # of Records to Advance (-ve for Delay): At REC# 0 Shift= 48.00 -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 117.39 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT 2012/11/02 12:15:18 275 records were deleted in this editing session. 6 changes in channel Salinity:T0:C0 -CALIB parameters: 2012/11/02 15:33:01 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2012-51\Processing\doc\2012-51-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 14 Oxygen:Dissolved:SBE mL/L 10 0.4800000E-01 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:Wetlabs:ECO-AFL Fluorescence:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2012/11/02 15:54:06 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] pH:SBE [pH Units] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2012/11/02 16:41:45 Applied edit header: P:\Cruise_Data_Processing\2012-51\Processing\doc\2012-51-HDR.TXT Channel 1: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: Salinity:Practical:T0:C0 [PSS-78] Name: Salinity:T0:C0 ==> Salinity:Practical:T0:C0 $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2012-51 sardine\2012-51-016.hex Software Version Seasave V 7.21d Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jul 24 2012 07:05:41 NMEA Latitude = 49 23.85 N NMEA Longitude = 126 55.99 W NMEA UTC (Time) = Jul 24 2012 07:04:05 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2012-51 Station: 16 Depth(m): 136 System UTC = Jul 24 2012 06:05:41 # nquan = 15 # nvalues = 10918 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity, Practical [PSU] # name 12 = sal11: Salinity, Practical, 2 [PSU] # name 13 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 14 = flag: flag # span 0 = 1, 10918 # span 1 = 2.495, 127.395 # span 2 = 6.6942, 13.2023 # span 3 = 6.6946, 13.1941 # span 4 = 3.387669, 3.696005 # span 5 = 3.387213, 3.696140 # span 6 = -0.0630, 11.0957 # span 7 = 1.0110, 2.6545 # span 8 = 8.255, 8.829 # span 9 = -1.745, 1.459 # span 10 = 0, 1 # span 11 = 30.9709, 33.8702 # span 12 = 30.9716, 33.8705 # span 13 = 1.77403, 7.02171 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Jul 24 2012 07:04:05 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 63507 # 12-Apr-11 # -4.435468e+004 # -1.845750e-001 # 1.192740e-002 # 3.979900e-002 # 0.000000e+000 # 2.993572e+001 # -3.336200e-004 # 3.759160e-006 # 1.565300e-009 # 0.99986626 # 5.62145 # 0.000000e+000 # 1.283280e-002 # -9.295010e+000 # # # # # # 2710 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.36717391e-003 # 6.46683268e-004 # 2.34981097e-005 # 2.22352352e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2128 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.01926507e+001 # 1.46093888e+000 # -2.51557628e-003 # 2.74924248e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # # # # # # # 0852 # 21-april-2012 # 4.6009 # 2.5060 # # # # # # # # # 0997 # 23-Apr-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.8010e-001 # -0.4816 # 1.4264e-003 # 2.8936e-005 # -9.0212e-007 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 1.5600 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2216 # June 2012 # 1.30000000e+001 # # 0.0427 # # # # datcnv_date = Nov 01 2012 08:44:02, 7.21d [datcnv_vars = 11] # datcnv_in = P:\Cruise_Data_Processing\2012-51\RAW\CTD\2012-51-0016.hex P:\Crui se_Data_Processing\2012-51\Processing\doc\2012-51-ctd-new.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = Nov 01 2012 08:46:31, 7.21d # wildedit_in = P:\Cruise_Data_Processing\2012-51\Processing\convert\2012-51-001 6.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Nov 01 2012 09:04:50, 7.21d # alignctd_in = P:\Cruise_Data_Processing\2012-51\Processing\wildedit\2012-51-00 16.cnv # alignctd_adv = sbeox0V 4.000 # celltm_date = Nov 01 2012 09:22:57, 7.21d # celltm_in = P:\Cruise_Data_Processing\2012-51\Processing\align\2012-51-0016.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 9.0000, 9.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Nov 01 2012 09:24:29, 7.21d [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2012-51\Processing\celltm\2012-51-0016.c nv P:\Cruise_Data_Processing\2012-51\Processing\doc\2012-51-ctd-new.xmlcon # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = yes # file_type = ascii END* CTDEDIT was used to remove surface records and records corrupted by shed wakes; salinity was cleaned very lightly. Data Processing Notes: ---------------------------------------------------------------------- Fluorescence data are nominal and unedited, except that some records were removed in editing temperature and salinity. There was no calibration sampling for dissolved oxygen, but the results of cruise 2012-01 were used to derive DO concentration. A small correction was later added based on negative DO values found during 2012-49 in the anoxic layer of Saanich Inlet. There was no calibration sampling for salinity, but the results of cruise 2012-01 in February 2012 suggest calibration drift is <0.001. The SBE pH sensor data has been removed from this file since there was no field calibration information available and there are concerns about how the sensor performs. For details on processing see processing report: 2012-49-proc.doc. ---------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.48E-01 1) $END !--1--- ---2---- ---3--- ---4---- --5--- --6-- -7-- !Pressu Temperat Fluores Salinity Oxygen Oxyge Numb !re ure: cence: :T0:C0 : n: er_o ! Primary URU: Dissol Disso ~bin ! Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- -------- ------ ----- ---- *END OF HEADER 5.0 13.1687 5.928 31.0357 6.49 283.2 30 6.0 13.1688 5.839 31.0359 6.50 283.5 23 7.0 13.1670 5.814 31.0359 6.50 283.4 20 8.0 13.1678 5.892 31.0357 6.50 283.6 26 9.0 13.1683 5.949 31.0353 6.50 283.6 33 10.0 13.1691 5.908 31.0355 6.49 283.4 27 11.0 13.1691 6.184 31.0356 6.48 282.7 21 12.0 13.1686 5.844 31.0364 6.47 282.3 18 13.0 13.1462 6.146 31.0548 6.45 281.5 30 14.0 13.1229 5.659 31.0779 6.36 277.5 25 15.0 13.1073 5.414 31.1083 6.24 272.4 22 16.0 13.0399 5.409 31.1629 6.19 270.0 23 17.0 12.8123 5.117 31.3047 6.28 273.7 29 18.0 12.3636 4.276 31.5526 6.43 280.2 30 19.0 11.6870 3.562 31.8975 6.43 280.3 24 20.0 10.9748 2.862 32.1367 6.40 279.0 20 21.0 10.5993 2.577 32.1700 6.34 276.2 21 22.0 10.3802 2.412 32.1945 6.25 272.2 24 23.0 10.1406 2.291 32.2261 6.19 269.8 29 24.0 9.8154 2.137 32.2784 6.21 270.6 30 25.0 9.4727 1.885 32.3391 6.19 269.6 24 26.0 9.4080 1.796 32.3506 6.14 267.6 20 27.0 9.3546 1.800 32.3606 6.11 266.3 20 28.0 9.2569 1.692 32.3753 6.08 264.9 20 29.0 8.9196 1.550 32.4384 6.05 263.3 27 30.0 8.6047 1.342 32.5025 6.04 262.8 37 31.0 8.3226 1.052 32.5661 6.14 267.2 28 32.0 8.1376 0.786 32.5992 6.16 268.4 22 33.0 8.0222 0.706 32.6173 6.05 263.4 21 34.0 7.9431 0.649 32.6329 5.90 256.8 22 35.0 7.9111 0.546 32.6519 5.80 252.6 27 36.0 7.8755 0.465 32.6729 5.60 243.9 21 37.0 7.7860 0.430 32.6922 5.22 227.3 27 38.0 7.7640 0.341 32.7217 4.89 212.8 28 39.0 7.7645 0.277 32.7543 4.67 203.2 26 40.0 7.7580 0.223 32.7760 4.54 197.5 24 41.0 7.7548 0.208 32.7934 4.49 195.4 24 42.0 7.7488 0.161 32.8129 4.28 186.4 26 43.0 7.7137 0.146 32.8287 4.01 174.8 32 44.0 7.7368 0.120 32.8761 3.85 167.5 29 45.0 7.7346 0.091 32.9020 3.82 166.2 22 46.0 7.7238 0.091 32.9288 3.85 167.7 22 47.0 7.6785 0.080 32.9653 3.88 168.7 27 48.0 7.6271 0.057 33.0025 3.94 171.6 30 49.0 7.6031 0.062 33.0252 4.11 178.9 23 50.0 7.5523 0.077 33.0792 4.23 184.0 25 51.0 7.5178 0.079 33.1031 4.31 187.7 31 52.0 7.4899 0.055 33.1207 4.41 192.0 25 53.0 7.4723 0.067 33.1371 4.57 198.7 20 54.0 7.4513 0.073 33.1540 4.71 205.0 19 55.0 7.4195 0.056 33.1696 4.79 208.5 22 56.0 7.3775 0.069 33.1915 4.81 209.1 27 56.9 7.3704 0.064 33.2030 4.71 204.8 37 57.9 7.3717 0.058 33.2321 4.48 194.8 22 59.0 7.3680 0.057 33.2636 4.31 187.6 17 60.0 7.3666 0.063 33.3201 4.18 181.8 18 61.0 7.3622 0.047 33.3819 4.01 174.6 24 62.0 7.3451 0.047 33.4080 3.76 163.7 44 62.9 7.3152 0.053 33.4453 3.58 155.7 24 64.0 7.2999 0.048 33.4580 3.53 153.4 19 65.0 7.2886 0.038 33.4718 3.47 151.0 17 66.0 7.2853 0.038 33.4771 3.38 147.3 25 67.0 7.2769 0.062 33.4879 3.39 147.3 39 68.0 7.2542 0.059 33.5228 3.49 152.0 27 69.0 7.2426 0.045 33.5432 3.54 153.8 18 70.0 7.2477 0.050 33.5513 3.51 152.9 20 71.0 7.2330 0.046 33.5807 3.47 150.9 23 72.0 7.2030 0.052 33.6182 3.44 149.5 33 73.0 7.1681 0.048 33.6346 3.44 149.5 31 74.0 7.1740 0.038 33.6432 3.44 149.5 25 75.0 7.2086 0.040 33.6676 3.43 149.3 25 76.0 7.2351 0.031 33.6821 3.39 147.7 30 77.0 7.2472 0.041 33.6934 3.34 145.4 24 78.0 7.2280 0.045 33.6945 3.29 143.3 19 79.0 7.2092 0.036 33.6934 3.25 141.5 19 80.0 7.1667 0.024 33.6901 3.23 140.3 26 81.0 7.1056 0.043 33.6921 3.21 139.5 39 81.9 7.0971 0.045 33.6967 3.17 138.1 27 83.0 7.1390 0.037 33.7213 3.15 137.0 17 84.0 7.1744 0.050 33.7388 3.13 136.2 22 85.0 7.1603 0.043 33.7428 3.10 135.0 32 85.9 7.1505 0.041 33.7480 3.08 134.0 34 87.0 7.1438 0.029 33.7541 3.04 132.0 23 88.0 7.1408 0.027 33.7568 3.00 130.7 18 89.0 7.1319 0.026 33.7680 2.98 129.5 20 90.0 7.1102 0.035 33.7773 2.94 128.0 28 91.0 7.0967 0.034 33.7801 2.89 125.7 29 92.0 7.0636 0.065 33.7847 2.83 123.2 25 93.0 7.0561 0.033 33.7963 2.78 120.9 23 94.0 7.0406 0.046 33.8050 2.73 118.9 30 95.0 6.9968 0.046 33.8131 2.70 117.4 28 96.0 6.9717 0.034 33.8158 2.66 115.6 26 97.0 6.9481 0.035 33.8178 2.58 112.3 28 98.0 6.9350 0.063 33.8203 2.42 105.1 22 99.0 6.8989 0.046 33.8213 2.22 96.5 22 100.0 6.8353 0.051 33.8247 2.08 90.2 19 101.0 6.7469 0.046 33.8489 1.99 86.5 24 102.0 6.7227 0.052 33.8600 1.94 84.2 31 103.0 6.7162 0.032 33.8628 1.91 83.2 21 104.0 6.7120 0.038 33.8644 1.91 82.9 18 105.0 6.7105 0.061 33.8649 1.90 82.8 17 106.0 6.7103 0.062 33.8655 1.90 82.8 32 107.0 6.7093 0.061 33.8657 1.90 82.5 28 108.0 6.7088 0.044 33.8662 1.89 82.4 20 109.0 6.7086 0.056 33.8665 1.89 82.4 17 110.0 6.7081 0.024 33.8668 1.89 82.4 25 111.0 6.7073 0.053 33.8669 1.90 82.6 33 112.0 6.7063 0.049 33.8673 1.91 83.0 20 113.0 6.7023 0.060 33.8676 1.91 83.0 19 114.0 6.7007 0.060 33.8680 1.91 83.0 21 115.0 6.7006 0.054 33.8680 1.91 83.0 33 116.0 6.7000 0.067 33.8682 1.90 82.8 27 117.0 6.6988 0.049 33.8686 1.91 82.9 19 118.0 6.6982 0.030 33.8687 1.91 83.0 21 119.1 6.6980 0.061 33.8687 1.91 82.9 32 119.9 6.6974 0.065 33.8687 1.90 82.7 34 121.0 6.6958 0.057 33.8692 1.90 82.6 20 122.0 6.6945 0.071 33.8697 1.90 82.5 17 123.0 6.6945 0.048 33.8696 1.90 82.5 17 124.0 6.6946 0.055 33.8696 1.90 82.6 22 125.0 6.6947 0.062 33.8695 1.90 82.5 38 126.1 6.6948 0.053 33.8694 1.89 82.1 98 127.1 6.6949 0.048 33.8693 1.87 81.3 39