*2013/12/16 15:38:33.02 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2012/07/13 22:27:24.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 117 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : BDBC15B7 NUMBER OF CHANNELS : 7 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 4.134 119.889 2 Temperature:Primary 'deg C (ITS90)' 7.3648 10.6096 3 Fluorescence:URU:Wetlabs mg/m^3 0.105 3.543 4 Salinity:T0:C0 PSS-78 29.3341 32.6025 5 Oxygen:Dissolved:SBE mL/L 3.578 6.5 6 Oxygen:Dissolved:SBE umol/kg 155.7631 283.7911 7 Number_of_bin_records n/a 24 41 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 6 F ' ' 1 7 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2012-50\Pro $END *ADMINISTRATION MISSION : 2012-50 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : High Seas Salmon SCIENTIST : Thiess M. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : WCVI / QCSound / QCStrait STATION : QCST11 EVENT NUMBER : 370 LATITUDE : 50 47.16000 N ! (deg min) LONGITUDE : 126 59.57000 W ! (deg min) *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0443 $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.1.2 2012/12/11 10:41:14 8942 8942 CLEAN 5.0.4 2012/12/11 10:43:14 8942 8942 SHIFTDAT 3.4 2012/12/11 11:20:12 8942 8942 SHIFTDAT 3.4 2012/12/11 11:49:43 8942 8942 SHIFTDAT 3.4 2012/12/11 11:55:19 8942 8942 SHIFTDAT 3.4 2012/12/11 13:24:08 8942 8942 DELETE 6.3 2012/12/11 16:01:46 8942 4016 CTDEDIT 4.61 2012/12/13 11:22:38 4016 3985 CALIB 11.7 2012/12/13 13:32:47 3985 3985 FILTERS 4.3 2012/12/13 13:33:29 3985 3985 BINAVE 4.1.1 2012/12/13 13:34:03 3985 117 REMOVECH 8.1.1 2012/12/13 13:34:33 117 117 CHGUNITS 3.0 2012/12/13 13:37:21 117 117 REORDER 1.3 2012/12/13 13:38:45 ? ? HDREDIT2 2.5.1 2012/12/13 17:07:25 ? ? CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:38:33 117 117 $END $REMARKS -CLEAN functions: 2012/12/11 10:42:29 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:Wetlabs:ECO-AFL # of Records to Advance (-ve for Delay): At REC# 0 Shift= 12.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: pH:SBE # of Records to Advance (-ve for Delay): At REC# 0 Shift= 48.00 -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 110.44 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT 2012/12/13 11:22:38 31 records were deleted in this editing session. 1 change in channel Salinity:T0:C0 -CALIB parameters: 2012/12/13 13:32:47 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2012-50\Processing\doc\2012-50-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 14 Oxygen:Dissolved:SBE mL/L 10 0.4800000E-01 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:Wetlabs:ECO-AFL Fluorescence:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2012/12/13 13:34:33 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] pH:SBE [pH Units] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2012/12/13 17:07:25 Applied edit header: P:\Cruise_Data_Processing\2012-50\Processing\doc\2012-50-HDR-911.TXT Channel 1: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs Channel 4: Salinity:Practical:T0:C0 [PSS-78] Name: Salinity:T0:C0 ==> Salinity:Practical:T0:C0 Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2012-50\2012-50-0370.hex Software Version Seasave V 7.21d Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jul 13 2012 22:29:13 NMEA Latitude = 50 47.16 N NMEA Longitude = 126 59.57 W NMEA UTC (Time) = Jul 13 2012 22:27:24 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2012-50 Station: QCST11 Depth(m): 128m System UTC = Jul 13 2012 21:29:13 # nquan = 15 # nvalues = 8942 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity, Practical [PSU] # name 12 = sal11: Salinity, Practical, 2 [PSU] # name 13 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 14 = flag: flag # span 0 = 1, 8942 # span 1 = 2.476, 120.444 # span 2 = 7.3646, 10.9431 # span 3 = 7.3650, 10.9120 # span 4 = 3.279903, 3.347155 # span 5 = 3.279333, 3.347329 # span 6 = 0.0005, 6.3020 # span 7 = 1.5348, 2.6032 # span 8 = 8.290, 8.595 # span 9 = -1.225, 1.632 # span 10 = 0, 1 # span 11 = 29.0008, 32.6031 # span 12 = 29.0286, 32.6031 # span 13 = 3.52442, 6.72860 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Jul 13 2012 22:27:24 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 63507 # 12-Apr-11 # -4.435468e+004 # -1.845750e-001 # 1.192740e-002 # 3.979900e-002 # 0.000000e+000 # 2.993572e+001 # -3.336200e-004 # 3.759160e-006 # 1.565300e-009 # 0.99986626 # 5.62145 # 0.000000e+000 # 1.283280e-002 # -9.295010e+000 # # # # # # 2710 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.36717391e-003 # 6.46683268e-004 # 2.34981097e-005 # 2.22352352e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2128 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.01926507e+001 # 1.46093888e+000 # -2.51557628e-003 # 2.74924248e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # # # # # # # 0852 # 21-april-2011 # 4.6009 # 2.5060 # # # # # # # # # 0997 # 23-Apr-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.8010e-001 # -0.4816 # 1.4264e-003 # 2.8936e-005 # -9.0212e-007 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 1.5600 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2216 # June 2012 # 1.30000000e+001 # # 0.0427 # # # # datcnv_date = Dec 10 2012 17:14:51, 7.21d [datcnv_vars = 11] # datcnv_in = P:\Cruise_Data_Processing\2012-50\RAW\CTD\SBE911_13-15JUL_with_pH\ 2012-50-0370.hex P:\Cruise_Data_Processing\2012-50\Processing\doc\2012-50-SBE911-pH-new.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = Dec 11 2012 09:08:12, 7.21d # wildedit_in = P:\Cruise_Data_Processing\2012-50\Processing\convert\2012-50-037 0.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Dec 11 2012 09:09:21, 7.21d # alignctd_in = P:\Cruise_Data_Processing\2012-50\Processing\wildedit\2012-50-03 70.cnv # alignctd_adv = sbeox0V 4.000 # celltm_date = Dec 11 2012 09:49:23, 7.21d # celltm_in = P:\Cruise_Data_Processing\2012-50\Processing\align\2012-50-0370.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 9.0000, 9.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Dec 11 2012 09:50:42, 7.21d [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2012-50\Processing\celltm\2012-50-0370.c nv P:\Cruise_Data_Processing\2012-50\Processing\doc\2012-50-SBE911-pH-new.xmlcon # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = yes # file_type = ascii END* CTDEDIT was used to remove some surface records. Data Processing Notes: ---------------------- The fluorescence data are nominal and unedited except that some records were removed in editing temperature and salinity. There was no Dissolved Oxygen sampling, so no estimate is made of accuracy. Recalibration was based on results of cruise 2012-01. It is likely that there has been some drift since then which usually results in values that are low by a few %. Salinity samples were stored for 4 months before they were analyzed. Based on recent cruises using the same types of bottle inserts, it appears that significant evaporation occurs after 2 months, and that by 4 months bottle values are likely to read high by an average of >0.01. Furthermore, all but one sample came from 10db where the salinity gradients were high, making the comparison even less suitable for recalibration of salinity. The last good calibration of the salinity from these sensors came from cruise 2012-01 in Feb. 2012 and showed the primary salinity to be very close to bottle values. A pH sensor was attached to the CTD for casts #355 to #409, but the data are not included in the files to be placed in the IOS Data Library because no field calibration information was available at the time of processing, and there are some concerns about how the sensors perform. For details on the processing see the report: 2012-50-proc.doc. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.48E-01 1) $END !--1--- ---2---- ---3--- ---4---- --5--- --6-- -7-- !Pressu Temperat Fluores Salinity Oxygen Oxyge Numb !re ure: cence: :T0:C0 : n: er_o ! Primary URU: Dissol Disso ~bin ! Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- -------- ------ ----- ---- *END OF HEADER 4.1 10.5040 1.979 29.4073 6.50 283.8 24 5.0 10.6096 1.638 29.3341 6.42 280.3 33 6.0 10.4550 1.811 29.4575 6.28 274.3 37 7.0 10.3493 2.245 29.6070 6.12 267.2 37 8.0 10.0496 3.082 29.7539 5.99 261.6 36 9.0 9.7662 3.543 29.9270 5.89 256.9 38 10.0 9.5920 3.529 30.0332 5.82 253.9 35 11.0 9.4653 3.535 30.1297 5.75 251.0 36 12.0 9.4238 3.513 30.2043 5.61 244.8 37 13.0 9.4165 3.245 30.3032 5.46 238.4 36 14.0 9.2539 2.870 30.4916 5.41 236.1 36 15.0 9.1997 2.743 30.5768 5.38 234.7 36 16.0 9.1845 2.696 30.5871 5.35 233.2 36 17.0 9.1649 2.764 30.5987 5.32 232.1 36 18.0 9.1359 2.735 30.6146 5.29 230.8 39 19.0 9.1116 2.711 30.6282 5.25 228.9 36 20.0 9.0827 2.546 30.6442 5.18 226.1 35 21.0 9.0263 2.328 30.7001 5.14 224.1 38 22.0 8.9625 1.980 30.7508 5.12 223.5 36 23.0 8.9393 1.725 30.7549 5.12 223.4 36 24.0 8.9360 1.722 30.7652 5.11 222.8 36 25.0 8.9238 1.676 30.7799 5.10 222.3 36 26.0 8.9101 1.543 30.8035 5.09 222.1 31 27.0 8.9051 1.464 30.8157 5.08 221.7 35 28.0 8.9034 1.412 30.8229 5.08 221.5 36 29.0 8.8990 1.409 30.8310 5.07 221.1 37 30.0 8.8920 1.407 30.8430 5.06 220.8 38 31.0 8.8870 1.365 30.8495 5.05 220.2 37 32.0 8.8736 1.310 30.8680 5.03 219.2 35 33.0 8.8584 1.265 30.8757 5.00 218.2 37 34.0 8.8283 1.121 30.8953 4.99 217.5 36 35.0 8.8056 1.013 30.9062 4.98 217.2 34 36.0 8.7881 0.962 30.9136 4.98 217.1 35 37.0 8.7826 0.928 30.9154 4.97 216.9 37 38.0 8.7819 0.892 30.9153 4.97 216.6 35 39.0 8.7803 0.888 30.9156 4.98 216.9 34 40.0 8.7808 0.890 30.9164 4.97 216.9 33 41.0 8.7818 0.884 30.9169 4.97 216.6 35 42.0 8.7791 0.870 30.9169 4.96 216.4 33 43.0 8.7762 0.877 30.9171 4.95 215.9 35 44.0 8.7739 0.871 30.9182 4.93 214.9 34 45.0 8.7608 0.877 30.9200 4.91 214.1 33 46.0 8.7089 0.819 30.9426 4.89 213.1 33 47.0 8.6895 0.716 30.9616 4.84 211.2 34 48.0 8.6679 0.688 30.9754 4.79 209.0 34 49.0 8.5883 0.664 31.0309 4.77 208.0 35 50.0 8.5400 0.595 31.0645 4.76 207.6 34 51.0 8.5211 0.550 31.0806 4.75 207.1 36 52.0 8.5108 0.538 31.0895 4.74 206.8 34 53.0 8.4935 0.512 31.1103 4.74 206.7 27 54.0 8.4912 0.479 31.1133 4.74 206.5 33 55.0 8.4898 0.507 31.1189 4.73 206.1 33 56.0 8.4666 0.488 31.1455 4.72 205.5 36 57.0 8.4521 0.488 31.1586 4.70 205.0 32 58.0 8.4390 0.434 31.1726 4.68 204.2 35 59.0 8.4035 0.388 31.2095 4.68 204.1 36 60.0 8.3939 0.410 31.2324 4.68 204.2 35 61.0 8.3969 0.389 31.2396 4.67 203.6 34 62.0 8.3912 0.397 31.2473 4.67 203.5 33 63.0 8.3619 0.363 31.2668 4.68 203.9 33 64.0 8.3451 0.335 31.2891 4.63 201.7 34 65.0 8.3362 0.322 31.3160 4.51 196.8 33 66.0 8.2217 0.312 31.4798 4.43 193.0 26 67.0 8.1062 0.278 31.6675 4.38 190.8 33 68.0 7.9960 0.231 31.8253 4.36 189.8 35 69.0 7.9663 0.204 31.8661 4.34 189.1 32 70.0 7.9554 0.186 31.8808 4.32 188.3 32 71.0 7.9495 0.196 31.8886 4.30 187.3 30 72.0 7.9207 0.182 31.9305 4.26 185.3 32 73.0 7.9023 0.171 31.9575 4.20 183.1 31 74.0 7.8405 0.161 32.0478 4.18 182.3 33 75.0 7.8089 0.159 32.0992 4.16 181.4 32 76.0 7.8089 0.152 32.1018 4.12 179.3 32 77.0 7.7736 0.146 32.1413 4.07 177.4 28 78.0 7.7338 0.140 32.1674 4.03 175.7 33 79.0 7.6961 0.154 32.1885 4.01 174.5 32 80.0 7.6545 0.161 32.2174 4.00 174.0 32 81.0 7.6340 0.143 32.2404 3.98 173.4 31 82.0 7.6375 0.131 32.2516 3.97 172.8 31 83.0 7.6296 0.144 32.2677 3.96 172.3 33 84.0 7.6256 0.151 32.2888 3.93 171.4 32 85.0 7.6065 0.141 32.3070 3.93 171.0 31 86.0 7.5996 0.139 32.3112 3.92 170.8 33 87.0 7.5994 0.132 32.3138 3.91 170.3 32 88.0 7.5975 0.163 32.3167 3.89 169.6 31 89.0 7.5831 0.154 32.3267 3.89 169.4 32 90.0 7.5731 0.145 32.3345 3.89 169.5 31 91.0 7.5764 0.151 32.3567 3.88 169.1 32 92.0 7.5663 0.148 32.3691 3.88 168.8 33 93.0 7.5503 0.150 32.3806 3.87 168.6 33 94.0 7.5466 0.138 32.3841 3.86 168.2 32 95.0 7.5425 0.144 32.3872 3.85 167.8 32 96.0 7.5352 0.134 32.3907 3.85 167.5 31 97.0 7.5287 0.141 32.3967 3.85 167.4 31 98.0 7.5277 0.151 32.4055 3.83 166.9 30 99.0 7.5201 0.123 32.4228 3.82 166.2 32 100.0 7.5050 0.110 32.4430 3.81 165.8 33 101.0 7.4893 0.105 32.4655 3.80 165.5 32 102.0 7.4830 0.118 32.4779 3.78 164.7 32 103.0 7.4744 0.137 32.4822 3.78 164.4 32 104.0 7.4679 0.132 32.4851 3.77 164.1 34 105.0 7.4641 0.153 32.4889 3.74 163.0 30 106.0 7.4538 0.122 32.5132 3.71 161.7 32 107.0 7.4232 0.148 32.5468 3.70 161.0 26 108.0 7.4138 0.136 32.5525 3.68 160.2 33 109.0 7.4096 0.142 32.5553 3.64 158.6 33 110.0 7.3930 0.140 32.5692 3.61 157.1 32 111.0 7.3803 0.157 32.5804 3.60 156.6 35 112.0 7.3771 0.190 32.5840 3.59 156.4 33 113.0 7.3763 0.162 32.5853 3.59 156.3 36 114.0 7.3736 0.173 32.5891 3.59 156.1 38 115.0 7.3723 0.160 32.5900 3.59 156.2 38 116.0 7.3683 0.174 32.5960 3.60 156.5 41 117.0 7.3662 0.155 32.6002 3.59 156.2 40 118.0 7.3664 0.157 32.6002 3.58 155.8 36 119.0 7.3659 0.157 32.6009 3.58 155.9 36 119.9 7.3648 0.165 32.6025 3.58 155.8 31