*2013/12/16 15:38:32.99 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2012/07/13 20:54:45.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 114 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 702AE349 NUMBER OF CHANNELS : 7 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 3.196 115.867 2 Temperature:Primary 'deg C (ITS90)' 7.3258 10.9353 3 Fluorescence:URU:Wetlabs mg/m^3 0.113 5.404 4 Salinity:T0:C0 PSS-78 29.8164 32.7095 5 Oxygen:Dissolved:SBE mL/L 3.549 7.139 6 Oxygen:Dissolved:SBE umol/kg 154.4871 311.6121 7 Number_of_bin_records n/a 5 47 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 6 F ' ' 1 7 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2012-50\Pro $END *ADMINISTRATION MISSION : 2012-50 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : High Seas Salmon SCIENTIST : Thiess M. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : WCVI / QCSound / QCStrait STATION : QCST10 EVENT NUMBER : 367 LATITUDE : 50 50.54000 N ! (deg min) LONGITUDE : 127 9.25000 W ! (deg min) *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0443 $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.1.2 2012/12/11 10:41:10 12901 12901 CLEAN 5.0.4 2012/12/11 10:43:10 12901 12901 SHIFTDAT 3.4 2012/12/11 11:20:08 12901 12901 SHIFTDAT 3.4 2012/12/11 11:49:39 12901 12901 SHIFTDAT 3.4 2012/12/11 11:55:15 12901 12901 SHIFTDAT 3.4 2012/12/11 13:24:04 12901 12901 DELETE 6.3 2012/12/11 16:01:44 12901 3762 CTDEDIT 4.61 2012/12/13 11:20:16 3762 3694 CALIB 11.7 2012/12/13 13:32:46 3694 3694 FILTERS 4.3 2012/12/13 13:33:28 3694 3694 BINAVE 4.1.1 2012/12/13 13:34:02 3694 114 REMOVECH 8.1.1 2012/12/13 13:34:33 114 114 CHGUNITS 3.0 2012/12/13 13:37:20 114 114 REORDER 1.3 2012/12/13 13:38:45 ? ? HDREDIT2 2.5.1 2012/12/13 17:07:24 ? ? CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:38:32 114 114 $END $REMARKS -CLEAN functions: 2012/12/11 10:42:29 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:Wetlabs:ECO-AFL # of Records to Advance (-ve for Delay): At REC# 0 Shift= 12.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: pH:SBE # of Records to Advance (-ve for Delay): At REC# 0 Shift= 48.00 -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 106.46 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT 2012/12/13 11:20:16 68 records were deleted in this editing session. 12 changes in channel Salinity:T0:C0 -CALIB parameters: 2012/12/13 13:32:46 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2012-50\Processing\doc\2012-50-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 14 Oxygen:Dissolved:SBE mL/L 10 0.4800000E-01 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:Wetlabs:ECO-AFL Fluorescence:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2012/12/13 13:34:33 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] pH:SBE [pH Units] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2012/12/13 17:07:24 Applied edit header: P:\Cruise_Data_Processing\2012-50\Processing\doc\2012-50-HDR-911.TXT Channel 1: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs Channel 4: Salinity:Practical:T0:C0 [PSS-78] Name: Salinity:T0:C0 ==> Salinity:Practical:T0:C0 Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2012-50\2012-50-0367.hex Software Version Seasave V 7.21d Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jul 13 2012 20:55:56 NMEA Latitude = 50 50.54 N NMEA Longitude = 127 09.25 W NMEA UTC (Time) = Jul 13 2012 20:54:45 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2012-50 Station: QCST10 Depth(m): 124m System UTC = Jul 13 2012 19:55:56 # nquan = 15 # nvalues = 12901 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity, Practical [PSU] # name 12 = sal11: Salinity, Practical, 2 [PSU] # name 13 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 14 = flag: flag # span 0 = 1, 12901 # span 1 = 2.556, 116.458 # span 2 = 7.3255, 11.1918 # span 3 = 7.3258, 11.1917 # span 4 = 3.280260, 3.389088 # span 5 = 3.280149, 3.388928 # span 6 = 0.0163, 7.1592 # span 7 = 1.5226, 2.7937 # span 8 = 8.286, 8.633 # span 9 = -1.318, 1.353 # span 10 = 0, 1 # span 11 = 29.7418, 32.7102 # span 12 = 29.7328, 32.7105 # span 13 = 3.48307, 7.26750 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Jul 13 2012 20:54:45 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 63507 # 12-Apr-11 # -4.435468e+004 # -1.845750e-001 # 1.192740e-002 # 3.979900e-002 # 0.000000e+000 # 2.993572e+001 # -3.336200e-004 # 3.759160e-006 # 1.565300e-009 # 0.99986626 # 5.62145 # 0.000000e+000 # 1.283280e-002 # -9.295010e+000 # # # # # # 2710 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.36717391e-003 # 6.46683268e-004 # 2.34981097e-005 # 2.22352352e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2128 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.01926507e+001 # 1.46093888e+000 # -2.51557628e-003 # 2.74924248e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # # # # # # # 0852 # 21-april-2011 # 4.6009 # 2.5060 # # # # # # # # # 0997 # 23-Apr-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.8010e-001 # -0.4816 # 1.4264e-003 # 2.8936e-005 # -9.0212e-007 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 1.5600 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2216 # June 2012 # 1.30000000e+001 # # 0.0427 # # # # datcnv_date = Dec 10 2012 17:14:49, 7.21d [datcnv_vars = 11] # datcnv_in = P:\Cruise_Data_Processing\2012-50\RAW\CTD\SBE911_13-15JUL_with_pH\ 2012-50-0367.hex P:\Cruise_Data_Processing\2012-50\Processing\doc\2012-50-SBE911-pH-new.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = Dec 11 2012 09:08:11, 7.21d # wildedit_in = P:\Cruise_Data_Processing\2012-50\Processing\convert\2012-50-036 7.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Dec 11 2012 09:09:20, 7.21d # alignctd_in = P:\Cruise_Data_Processing\2012-50\Processing\wildedit\2012-50-03 67.cnv # alignctd_adv = sbeox0V 4.000 # celltm_date = Dec 11 2012 09:49:21, 7.21d # celltm_in = P:\Cruise_Data_Processing\2012-50\Processing\align\2012-50-0367.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 9.0000, 9.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Dec 11 2012 09:50:41, 7.21d [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2012-50\Processing\celltm\2012-50-0367.c nv P:\Cruise_Data_Processing\2012-50\Processing\doc\2012-50-SBE911-pH-new.xmlcon # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = yes # file_type = ascii END* CTDEDIT was used to remove surface records and records from the bottom of the cast; salinity was cleaned lightly. Data Processing Notes: ---------------------- The fluorescence data are nominal and unedited except that some records were removed in editing temperature and salinity. There was no Dissolved Oxygen sampling, so no estimate is made of accuracy. Recalibration was based on results of cruise 2012-01. It is likely that there has been some drift since then which usually results in values that are low by a few %. Salinity samples were stored for 4 months before they were analyzed. Based on recent cruises using the same types of bottle inserts, it appears that significant evaporation occurs after 2 months, and that by 4 months bottle values are likely to read high by an average of >0.01. Furthermore, all but one sample came from 10db where the salinity gradients were high, making the comparison even less suitable for recalibration of salinity. The last good calibration of the salinity from these sensors came from cruise 2012-01 in Feb. 2012 and showed the primary salinity to be very close to bottle values. A pH sensor was attached to the CTD for casts #355 to #409, but the data are not included in the files to be placed in the IOS Data Library because no field calibration information was available at the time of processing, and there are some concerns about how the sensors perform. For details on the processing see the report: 2012-50-proc.doc. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.48E-01 1) $END !--1--- ---2---- ---3--- ---4---- --5--- --6-- -7-- !Pressu Temperat Fluores Salinity Oxygen Oxyge Numb !re ure: cence: :T0:C0 : n: er_o ! Primary URU: Dissol Disso ~bin ! Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- -------- ------ ----- ---- *END OF HEADER 3.2 10.8839 3.645 29.8171 7.14 311.6 8 4.4 10.6744 4.429 29.8340 7.00 305.4 5 5.0 10.6774 4.094 29.8388 6.87 299.9 29 6.0 10.9353 3.477 29.8164 6.54 285.6 30 7.0 10.3152 3.784 29.9243 6.07 264.8 25 8.0 9.9245 5.185 29.9929 5.68 247.8 29 9.0 9.4185 5.404 30.1684 5.45 237.9 31 10.0 9.2276 4.414 30.3077 5.27 229.8 33 11.0 9.0382 2.809 30.5244 5.18 226.0 33 12.0 8.9243 1.769 30.6313 5.14 224.2 37 13.0 8.8695 1.437 30.6884 5.11 223.0 36 14.0 8.8385 1.267 30.7204 5.09 222.1 35 15.0 8.8330 1.175 30.7276 5.08 221.6 33 16.0 8.8242 1.143 30.7376 5.06 220.7 33 17.0 8.8133 1.085 30.7500 5.04 219.9 36 18.0 8.7919 1.057 30.7733 5.03 219.2 38 19.0 8.7722 1.008 30.8006 5.00 218.1 37 20.0 8.7572 1.022 30.8178 4.98 217.2 36 21.0 8.7372 0.934 30.8381 4.97 216.7 38 22.0 8.7226 0.880 30.8526 4.95 215.9 35 23.0 8.7163 0.849 30.8575 4.93 215.2 33 24.0 8.6813 0.770 30.8971 4.94 215.5 34 25.0 8.6649 0.704 30.9172 4.93 214.9 35 26.0 8.6601 0.678 30.9265 4.90 213.6 34 27.0 8.6009 0.653 30.9880 4.91 213.9 32 28.0 8.5489 0.592 31.0359 4.91 214.2 35 29.0 8.5390 0.505 31.0456 4.91 214.1 33 30.0 8.5320 0.468 31.0520 4.91 213.8 34 31.0 8.5207 0.481 31.0610 4.90 213.4 33 32.0 8.5171 0.428 31.0643 4.88 212.9 31 33.0 8.4938 0.458 31.0887 4.88 212.8 33 34.0 8.4865 0.424 31.0976 4.88 212.8 34 35.0 8.4858 0.402 31.1027 4.89 213.1 33 36.0 8.4839 0.415 31.1155 4.90 213.4 32 37.0 8.4816 0.398 31.1284 4.91 213.9 33 38.0 8.4773 0.366 31.1632 4.92 214.3 30 39.0 8.4813 0.384 31.2001 4.90 213.8 32 40.0 8.4837 0.369 31.2314 4.88 212.7 32 41.0 8.4711 0.350 31.2610 4.86 211.8 31 42.0 8.4209 0.338 31.2941 4.87 212.4 31 43.0 8.4191 0.336 31.3062 4.90 213.6 32 44.0 8.4322 0.323 31.3301 4.93 214.9 33 45.0 8.4611 0.301 31.4122 4.93 214.7 30 46.0 8.4812 0.260 31.5249 4.90 213.4 29 47.0 8.4811 0.266 31.5440 4.86 212.0 31 48.0 8.4385 0.252 31.6037 4.81 209.8 31 49.0 8.4131 0.222 31.6633 4.74 206.6 31 50.0 8.3645 0.195 31.6776 4.65 202.4 31 51.0 8.3040 0.220 31.6889 4.58 199.5 32 52.0 8.1624 0.246 31.7319 4.59 200.1 32 53.0 8.1456 0.236 31.7628 4.61 200.7 26 54.0 8.1866 0.199 31.7878 4.59 200.2 31 55.0 8.1991 0.200 31.7918 4.55 198.4 32 56.0 8.1834 0.188 31.8025 4.47 194.8 31 57.0 8.1069 0.218 31.8261 4.41 192.2 32 58.0 8.0149 0.211 31.8557 4.38 190.9 31 59.0 7.9889 0.205 31.8700 4.34 189.2 32 60.0 7.9640 0.217 31.9044 4.31 187.6 23 61.0 7.9242 0.200 31.9421 4.26 185.5 32 62.0 7.9034 0.225 31.9714 4.21 183.5 31 63.0 7.8696 0.224 32.0345 4.18 181.8 31 64.0 7.8376 0.216 32.0563 4.12 179.4 34 65.0 7.8028 0.188 32.1232 4.09 178.0 34 66.0 7.7864 0.245 32.1602 4.07 177.3 33 67.0 7.7728 0.208 32.1811 4.06 177.0 31 68.0 7.7478 0.211 32.1982 4.05 176.3 31 69.0 7.7248 0.180 32.2094 4.03 175.6 30 70.0 7.6849 0.146 32.2354 4.02 175.2 33 71.0 7.6769 0.160 32.2413 4.02 174.9 32 72.0 7.6714 0.157 32.2449 4.00 174.2 31 73.0 7.6683 0.161 32.2488 3.98 173.5 32 74.0 7.6581 0.159 32.2596 3.97 173.0 34 75.0 7.6488 0.157 32.2709 3.97 172.7 33 76.0 7.6448 0.162 32.2764 3.96 172.3 31 77.0 7.6405 0.165 32.2820 3.96 172.4 31 78.0 7.6369 0.159 32.2873 3.97 172.9 32 79.0 7.6377 0.166 32.2936 3.98 173.5 33 80.0 7.6500 0.158 32.3023 3.99 173.7 36 81.0 7.6565 0.146 32.3217 3.98 173.3 32 82.0 7.6485 0.154 32.3339 3.97 173.0 32 83.0 7.6441 0.149 32.3377 3.97 172.9 34 84.0 7.6404 0.152 32.3445 3.96 172.7 33 85.0 7.6364 0.144 32.3509 3.95 172.2 32 86.0 7.6268 0.140 32.3634 3.93 171.3 32 87.0 7.6224 0.113 32.3685 3.88 169.1 32 88.0 7.6004 0.141 32.3925 3.83 166.7 31 89.0 7.5372 0.132 32.4485 3.82 166.1 36 90.0 7.5282 0.136 32.4535 3.80 165.6 32 91.0 7.5221 0.148 32.4589 3.80 165.6 33 92.0 7.5197 0.160 32.4629 3.80 165.4 35 93.0 7.5169 0.157 32.4703 3.81 165.7 34 94.0 7.5150 0.148 32.4775 3.80 165.5 32 95.0 7.5155 0.150 32.4834 3.80 165.2 32 96.0 7.5128 0.156 32.4873 3.79 164.8 34 97.0 7.5084 0.120 32.4928 3.78 164.5 34 98.0 7.5044 0.131 32.4959 3.78 164.4 35 99.0 7.4991 0.139 32.4995 3.77 164.0 33 100.0 7.4963 0.128 32.5029 3.76 163.8 31 101.0 7.4920 0.149 32.5064 3.75 163.4 33 102.0 7.4903 0.145 32.5080 3.74 162.9 34 103.0 7.4855 0.139 32.5112 3.72 162.1 31 104.0 7.4774 0.150 32.5193 3.70 161.1 34 105.0 7.4575 0.142 32.5423 3.69 160.7 34 106.0 7.4472 0.168 32.5562 3.68 160.3 34 107.0 7.4400 0.138 32.5701 3.67 159.9 33 108.0 7.4237 0.147 32.5860 3.67 159.8 33 109.0 7.4162 0.124 32.5999 3.65 159.0 33 110.0 7.4115 0.121 32.6078 3.62 157.5 30 111.0 7.3896 0.116 32.6345 3.59 156.4 25 112.0 7.3664 0.127 32.6599 3.58 155.9 27 113.1 7.3477 0.132 32.6847 3.57 155.4 38 114.0 7.3365 0.120 32.6984 3.55 154.7 47 115.0 7.3284 0.131 32.7067 3.56 154.7 40 115.9 7.3258 0.131 32.7095 3.55 154.5 28