*2013/12/16 15:38:32.67 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2012/07/12 21:39:21.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 130 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 16B8F621 NUMBER OF CHANNELS : 7 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 3.218 131.962 2 Temperature:Primary 'deg C (ITS90)' 7.4164 10.634 3 Fluorescence:URU:Wetlabs mg/m^3 0.184 5.278 4 Salinity:T0:C0 PSS-78 30.4387 32.6333 5 Oxygen:Dissolved:SBE mL/L 3.601 6.535 6 Oxygen:Dissolved:SBE umol/kg 156.7622 285.1002 7 Number_of_bin_records n/a 14 43 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 6 F ' ' 1 7 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2012-50\Pro $END *ADMINISTRATION MISSION : 2012-50 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : High Seas Salmon SCIENTIST : Thiess M. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : WCVI / QCSound / QCStrait STATION : QCST04 EVENT NUMBER : 349 LATITUDE : 50 51.39000 N ! (deg min) LONGITUDE : 127 17.89000 W ! (deg min) *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0443 $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.1.2 2012/12/11 10:40:47 9867 9867 CLEAN 5.0.4 2012/12/11 10:42:44 9867 9867 SHIFTDAT 3.4 2012/12/11 11:19:44 9867 9867 SHIFTDAT 3.4 2012/12/11 11:49:15 9867 9867 SHIFTDAT 3.4 2012/12/11 11:54:50 9867 9867 DELETE 6.3 2012/12/11 16:01:21 9867 4176 CTDEDIT 4.61 2012/12/12 17:38:13 4176 4176 CALIB 11.7 2012/12/13 13:32:35 4176 4176 FILTERS 4.3 2012/12/13 13:33:18 4176 4176 BINAVE 4.1.1 2012/12/13 13:33:57 4176 130 REMOVECH 8.1.1 2012/12/13 13:34:33 130 130 CHGUNITS 3.0 2012/12/13 13:37:20 130 130 REORDER 1.3 2012/12/13 13:38:44 ? ? HDREDIT2 2.5.1 2012/12/13 17:07:24 ? ? CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:38:32 130 130 $END $REMARKS -CLEAN functions: 2012/12/11 10:42:29 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:Wetlabs:ECO-AFL # of Records to Advance (-ve for Delay): At REC# 0 Shift= 12.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 122.53 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT 2012/12/12 17:38:13 73 changes in channel Salinity:T0:C0 -CALIB parameters: 2012/12/13 13:32:35 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2012-50\Processing\doc\2012-50-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 13 Oxygen:Dissolved:SBE mL/L 10 0.4800000E-01 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:Wetlabs:ECO-AFL Fluorescence:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2012/12/13 13:34:33 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2012/12/13 17:07:24 Applied edit header: P:\Cruise_Data_Processing\2012-50\Processing\doc\2012-50-HDR-911.TXT Channel 1: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs Channel 4: Salinity:Practical:T0:C0 [PSS-78] Name: Salinity:T0:C0 ==> Salinity:Practical:T0:C0 Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2012-50\2012-50-0349.hex Software Version Seasave V 7.21d Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jul 12 2012 21:38:52 NMEA Latitude = 50 51.39 N NMEA Longitude = 127 17.89 W NMEA UTC (Time) = Jul 12 2012 21:39:21 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2012-50 Station: QCST04 Depth(m): 140m System UTC = Jul 12 2012 20:38:52 # nquan = 14 # nvalues = 9867 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = dz/dtM: Descent Rate [m/s] # name 9 = pumps: Pump Status # name 10 = sal00: Salinity, Practical [PSU] # name 11 = sal11: Salinity, Practical, 2 [PSU] # name 12 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 13 = flag: flag # span 0 = 1, 9867 # span 1 = 2.447, 132.534 # span 2 = 7.4155, 10.6537 # span 3 = 7.4160, 10.6529 # span 4 = 3.303914, 3.414558 # span 5 = 3.303916, 3.414614 # span 6 = 0.0957, 5.8576 # span 7 = 1.5421, 2.5507 # span 8 = -1.110, 1.273 # span 9 = 0, 1 # span 10 = 30.4201, 32.6351 # span 11 = 30.4115, 32.6355 # span 12 = 3.54898, 6.49841 # span 13 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Jul 12 2012 21:39:21 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 63507 # 12-Apr-11 # -4.435468e+004 # -1.845750e-001 # 1.192740e-002 # 3.979900e-002 # 0.000000e+000 # 2.993572e+001 # -3.336200e-004 # 3.759160e-006 # 1.565300e-009 # 0.99986626 # 5.62145 # 0.000000e+000 # 1.283280e-002 # -9.295010e+000 # # # # # # 2710 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.36717391e-003 # 6.46683268e-004 # 2.34981097e-005 # 2.22352352e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2128 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.01926507e+001 # 1.46093888e+000 # -2.51557628e-003 # 2.74924248e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # # # # # # # # # # # # # 0997 # 23-Apr-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.8010e-001 # -0.4816 # 1.4264e-003 # 2.8936e-005 # -9.0212e-007 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 1.5600 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2216 # June 2012 # 1.30000000e+001 # # 0.0427 # # # # datcnv_date = Dec 10 2012 17:13:28, 7.21d [datcnv_vars = 10] # datcnv_in = P:\Cruise_Data_Processing\2012-50\RAW\CTD\SBE911_12JUL_no_pH\2012- 50-0349.hex P:\Cruise_Data_Processing\2012-50\Processing\doc\2012-50-SBE911-noph-new.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = Dec 11 2012 09:07:53, 7.21d # wildedit_in = P:\Cruise_Data_Processing\2012-50\Processing\convert\2012-50-034 9.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Dec 11 2012 09:10:00, 7.21d # alignctd_in = P:\Cruise_Data_Processing\2012-50\Processing\wildedit\2012-50-03 49.cnv # alignctd_adv = sbeox0V 4.000 # celltm_date = Dec 11 2012 09:49:04, 7.21d # celltm_in = P:\Cruise_Data_Processing\2012-50\Processing\align\2012-50-0349.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 9.0000, 9.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Dec 11 2012 09:50:12, 7.21d [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2012-50\Processing\celltm\2012-50-0349.c nv P:\Cruise_Data_Processing\2012-50\Processing\doc\2012-50-SBE911-noph-new.xmlcon # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = yes # file_type = ascii END* CTDEDIT was used to clean salinity lightly. Data Processing Notes: ---------------------- The fluorescence data are nominal and unedited except that some records were removed in editing temperature and salinity. There was no Dissolved Oxygen sampling, so no estimate is made of accuracy. Recalibration was based on results of cruise 2012-01. It is likely that there has been some drift since then which usually results in values that are low by a few %. Salinity samples were stored for 4 months before they were analyzed. Based on recent cruises using the same types of bottle inserts, it appears that significant evaporation occurs after 2 months, and that by 4 months bottle values are likely to read high by an average of >0.01. Furthermore, all but one sample came from 10db where the salinity gradients were high, making the comparison even less suitable for recalibration of salinity. The last good calibration of the salinity from these sensors came from cruise 2012-01 in Feb. 2012 and showed the primary salinity to be very close to bottle values. A pH sensor was attached to the CTD for casts #355 to #409, but the data are not included in the files to be placed in the IOS Data Library because no field calibration information was available at the time of processing, and there are some concerns about how the sensors perform. For details on the processing see the report: 2012-50-proc.doc. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.48E-01 1) $END !--1--- ---2---- ---3--- ---4---- --5--- --6-- -7-- !Pressu Temperat Fluores Salinity Oxygen Oxyge Numb !re ure: cence: :T0:C0 : n: er_o ! Primary URU: Dissol Disso ~bin ! Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- -------- ------ ----- ---- *END OF HEADER 3.2 10.6127 2.677 30.4397 6.53 285.1 14 4.0 10.6269 2.818 30.4398 6.53 285.1 40 5.0 10.6264 2.900 30.4394 6.52 284.5 32 6.0 10.6261 2.899 30.4393 6.53 284.9 26 7.0 10.6314 2.861 30.4389 6.51 284.2 30 8.0 10.6331 2.864 30.4391 6.46 281.9 33 9.0 10.6340 2.890 30.4387 6.40 279.3 28 10.0 10.4967 3.426 30.4437 6.38 278.2 32 11.0 10.2230 4.789 30.4523 6.37 277.8 32 12.0 10.1333 5.278 30.4520 6.27 273.5 31 13.0 10.1042 5.128 30.4497 6.12 266.9 32 14.0 10.0133 5.090 30.4819 5.99 261.4 33 15.0 9.9489 5.057 30.5178 5.87 256.1 32 16.0 9.8805 4.772 30.5431 5.76 251.2 31 17.0 9.7670 4.284 30.5718 5.64 246.2 31 18.0 9.6599 3.926 30.5952 5.53 241.3 34 19.0 9.4595 3.629 30.6468 5.49 239.3 36 20.0 9.3338 3.295 30.6864 5.47 238.3 33 21.0 9.2980 3.168 30.6989 5.44 237.2 32 22.0 9.2739 3.067 30.7103 5.40 235.3 32 23.0 9.2444 2.955 30.7240 5.34 232.8 31 24.0 9.1745 2.694 30.7557 5.25 228.8 31 25.0 9.1159 2.550 30.7865 5.09 221.9 35 26.0 8.9516 2.205 30.8797 4.98 217.0 37 27.0 8.6635 1.105 31.0271 4.96 216.2 43 28.0 8.6248 0.836 31.0523 4.95 215.7 38 29.0 8.6170 0.782 31.0646 4.94 215.2 37 30.0 8.6055 0.722 31.0829 4.93 215.1 31 31.0 8.6003 0.721 31.0907 4.93 214.7 33 32.0 8.5968 0.718 31.0952 4.92 214.5 30 33.0 8.5917 0.684 31.1011 4.92 214.3 30 34.0 8.5860 0.677 31.1084 4.91 214.2 36 35.0 8.5840 0.663 31.1118 4.91 213.9 36 36.0 8.5756 0.641 31.1251 4.91 213.9 35 37.0 8.5702 0.674 31.1347 4.93 214.8 35 38.0 8.5692 0.656 31.1510 4.97 216.7 28 39.0 8.5869 0.673 31.1634 4.98 217.2 25 40.0 8.5932 0.605 31.2210 4.95 215.8 32 41.0 8.5945 0.567 31.2730 4.90 213.7 31 42.0 8.5254 0.490 31.3114 4.91 213.9 32 43.0 8.4695 0.440 31.3376 4.91 213.9 33 44.0 8.5172 0.417 31.3623 4.86 211.9 32 45.0 8.4841 0.384 31.3790 4.84 210.8 33 46.0 8.4131 0.345 31.3935 4.87 212.1 32 47.0 8.4091 0.323 31.4328 4.90 213.5 30 48.0 8.4444 0.312 31.4660 4.93 214.6 28 49.0 8.4612 0.304 31.4767 4.94 215.1 31 50.0 8.4908 0.269 31.5262 4.93 214.8 33 51.0 8.5008 0.264 31.5607 4.91 213.8 32 52.0 8.4905 0.250 31.6137 4.88 212.7 34 53.0 8.4677 0.237 31.6385 4.81 209.5 33 54.0 8.4491 0.243 31.6504 4.71 205.1 33 55.0 8.3448 0.233 31.7218 4.68 203.9 24 56.0 8.2814 0.221 31.7649 4.68 203.8 28 57.0 8.2738 0.230 31.7686 4.67 203.5 31 58.0 8.2673 0.231 31.7717 4.67 203.4 30 59.0 8.2646 0.228 31.7747 4.66 203.1 31 60.0 8.2650 0.241 31.7751 4.64 202.2 31 61.0 8.2483 0.227 31.7894 4.62 201.4 34 62.0 8.2325 0.232 31.8019 4.61 200.6 33 63.0 8.2053 0.235 31.8173 4.59 199.7 31 64.0 8.1973 0.242 31.8270 4.55 198.1 28 65.0 8.1924 0.224 31.8382 4.49 195.8 30 66.0 8.1360 0.232 31.8480 4.44 193.5 33 67.0 8.0526 0.206 31.8866 4.40 191.5 32 68.0 8.0208 0.246 31.9235 4.37 190.4 30 69.0 8.0046 0.270 31.9455 4.33 188.7 32 70.0 7.9934 0.270 31.9629 4.30 187.2 35 71.0 7.9758 0.303 32.0017 4.28 186.6 28 72.0 7.9724 0.289 32.0131 4.27 186.0 30 73.0 7.9715 0.311 32.0184 4.26 185.6 31 74.0 7.9701 0.329 32.0284 4.25 185.2 32 75.0 7.9702 0.325 32.0365 4.23 184.2 32 76.0 7.9688 0.335 32.0405 4.20 182.8 35 77.0 7.9487 0.335 32.0663 4.16 181.0 35 78.0 7.9252 0.333 32.0896 4.10 178.7 35 79.0 7.8798 0.320 32.1369 4.07 177.0 34 80.0 7.8395 0.294 32.1736 4.05 176.4 29 81.0 7.8065 0.283 32.1890 4.05 176.3 29 82.0 7.7958 0.273 32.1906 4.03 175.6 31 83.0 7.7901 0.255 32.1922 4.00 174.2 33 84.0 7.7609 0.252 32.2080 3.97 172.9 30 85.0 7.7308 0.225 32.2523 3.96 172.3 34 86.0 7.7073 0.240 32.2781 3.95 172.1 33 87.0 7.7026 0.240 32.2837 3.96 172.4 34 88.0 7.7130 0.262 32.3028 3.97 172.7 28 89.0 7.7295 0.239 32.3085 3.94 171.8 28 90.0 7.7584 0.279 32.3149 3.91 170.4 32 91.0 7.7310 0.252 32.3414 3.91 170.1 29 92.0 7.6804 0.241 32.3485 3.89 169.3 30 93.0 7.7255 0.268 32.3707 3.85 167.6 33 94.0 7.6643 0.237 32.3953 3.84 167.1 35 95.0 7.6462 0.245 32.4020 3.83 166.6 28 96.0 7.6350 0.247 32.4215 3.82 166.5 31 97.0 7.6270 0.226 32.4337 3.82 166.2 32 98.0 7.6241 0.222 32.4351 3.81 166.1 29 99.0 7.6291 0.245 32.4420 3.80 165.5 28 100.0 7.6425 0.255 32.4753 3.79 165.0 31 101.0 7.6211 0.249 32.4901 3.78 164.6 32 102.0 7.6128 0.258 32.4916 3.77 164.0 34 103.0 7.5980 0.257 32.4932 3.75 163.4 32 104.0 7.5578 0.220 32.4984 3.75 163.3 32 105.0 7.5382 0.214 32.5049 3.74 163.0 35 106.0 7.5310 0.205 32.5158 3.73 162.6 32 107.0 7.5221 0.204 32.5346 3.72 162.0 29 108.0 7.5117 0.189 32.5503 3.71 161.5 29 109.0 7.4980 0.203 32.5686 3.70 161.0 32 110.0 7.4865 0.203 32.5855 3.69 160.7 33 111.0 7.4772 0.212 32.5954 3.69 160.7 32 112.0 7.4789 0.184 32.5944 3.68 160.4 29 113.0 7.4772 0.203 32.5960 3.67 159.9 28 114.0 7.4735 0.207 32.6029 3.66 159.2 32 115.0 7.4697 0.203 32.6193 3.65 158.9 30 116.0 7.4533 0.194 32.6268 3.64 158.6 29 117.0 7.4505 0.198 32.6279 3.63 158.0 29 118.0 7.4377 0.202 32.6305 3.62 157.8 33 119.0 7.4364 0.195 32.6309 3.62 157.8 33 120.0 7.4323 0.201 32.6322 3.63 157.9 31 121.0 7.4308 0.206 32.6333 3.63 158.1 32 122.0 7.4335 0.190 32.6328 3.64 158.3 34 123.0 7.4385 0.204 32.6324 3.64 158.4 30 124.0 7.4452 0.207 32.6312 3.63 158.1 32 125.0 7.4414 0.188 32.6323 3.63 158.2 33 126.0 7.4412 0.199 32.6321 3.63 158.2 33 127.0 7.4413 0.192 32.6319 3.63 158.2 33 128.0 7.4420 0.201 32.6317 3.63 157.9 34 129.0 7.4417 0.185 32.6329 3.61 157.3 35 130.0 7.4331 0.201 32.6323 3.60 156.8 36 131.0 7.4164 0.190 32.6315 3.60 156.9 36 132.0 7.4165 0.214 32.6312 3.61 157.1 31