*2013/12/16 15:38:27.92 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2012/07/05 23:36:53.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 75 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : DF12772C NUMBER OF CHANNELS : 7 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 4.064 78.127 2 Temperature:Primary 'deg C (ITS90)' 8.1999 10.3892 3 Fluorescence:URU:Wetlabs mg/m^3 0.43 1.166 4 Salinity:T0:C0 PSS-78 30.5371 32.2462 5 Oxygen:Dissolved:SBE mL/L 2.959 4.3 6 Oxygen:Dissolved:SBE umol/kg 128.8659 187.5739 7 Number_of_bin_records n/a 24 53 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 6 F ' ' 1 7 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2012-49\Pro $END *ADMINISTRATION MISSION : 2012-49 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : Strait of Georgia Juvenile Salmon Survey SCIENTIST : Neville C. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Strait of Georgia / Juan de Fuca Strait STATION : 149 EVENT NUMBER : 45 LATITUDE : 48 18.31000 N ! (deg min) LONGITUDE : 123 17.56000 W ! (deg min) WATER DEPTH : 96 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0443 $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.1.2 2012/10/25 14:40:08 11882 11882 CLEAN 5.0.4 2012/10/25 14:46:03 11882 11882 MERGEHDR 1.1 2012/10/25 15:29:26 11882 11882 SHIFTDAT 3.4 2012/10/25 15:47:51 11882 11882 SHIFTDAT 3.4 2012/11/01 13:15:47 11882 11882 SHIFTDAT 3.4 2012/11/01 13:19:03 11882 11882 DELETE 6.3 2012/11/01 13:42:18 11882 3582 CTDEDIT 4.61 2012/11/01 16:35:19 3582 2961 CALIB 11.7 2012/11/01 17:12:54 2961 2961 FILTERS 4.3 2012/11/01 17:14:58 2961 2961 BINAVE 4.1.1 2012/11/01 17:15:55 2961 75 REMOVECH 8.1.1 2012/11/01 17:16:34 75 75 CHGUNITS 3.0 2012/11/01 17:17:58 75 75 MERGEHDR 1.1 2012/11/01 17:26:28 75 75 REORDER 1.3 2012/11/01 17:27:58 ? ? HDREDIT2 2.5.1 2012/11/01 17:34:25 ? ? CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:38:27 75 75 $END $REMARKS -CLEAN functions: 2012/10/25 14:42:58 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:Wetlabs:ECO-AFL # of Records to Advance (-ve for Delay): At REC# 0 Shift= 12.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 70.25 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT 2012/11/01 16:35:19 621 records were deleted in this editing session. 3 changes in channel Salinity:T0:C0 -CALIB parameters: 2012/11/01 17:12:54 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2012-49\Processing\doc\2012-49-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 14 Oxygen:Dissolved:SBE mL/L 10 0.4800000E-01 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:Wetlabs:ECO-AFL Fluorescence:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2012/11/01 17:16:34 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] pH:SBE [pH Units] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2012/11/01 17:34:25 Applied edit header: P:\Cruise_Data_Processing\2012-49\Processing\doc\2012-49-HDR.TXT Channel 1: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: Salinity:Practical:T0:C0 [PSS-78] Name: Salinity:T0:C0 ==> Salinity:Practical:T0:C0 $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2012-03A\2012-03A-0045hex.hex Software Version Seasave V 7.21d Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jul 05 2012 23:34:54 NMEA Latitude = 48 18.31 N NMEA Longitude = 123 17.56 W NMEA UTC (Time) = Jul 05 2012 23:36:53 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2012-03 Station: Depth(m): System UTC = Jul 05 2012 22:34:54 # nquan = 15 # nvalues = 11882 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity, Practical [PSU] # name 12 = sal11: Salinity, Practical, 2 [PSU] # name 13 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 14 = flag: flag # span 0 = 1, 11882 # span 1 = 0.591, 80.254 # span 2 = 8.1846, 14.3140 # span 3 = 8.1866, 14.2185 # span 4 = -0.132424, 3.477822 # span 5 = -0.218475, 3.525574 # span 6 = -0.5551, 64.4449 # span 7 = 1.4518, 2.5360 # span 8 = 4.832, 8.819 # span 9 = -1.853, 1.351 # span 10 = 0, 1 # span 11 = 0.0000, 32.2639 # span 12 = 0.0000, 32.2618 # span 13 = 2.88875, 6.74826 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Jul 05 2012 23:36:53 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 63507 # 12-Apr-11 # -4.435468e+004 # -1.845750e-001 # 1.192740e-002 # 3.979900e-002 # 0.000000e+000 # 2.993572e+001 # -3.336200e-004 # 3.759160e-006 # 1.565300e-009 # 0.99986626 # 5.62145 # 0.000000e+000 # 1.283280e-002 # -9.295010e+000 # # # # # # 2710 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.36717391e-003 # 6.46683268e-004 # 2.34981097e-005 # 2.22352352e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2128 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.01926507e+001 # 1.46093888e+000 # -2.51557628e-003 # 2.74924248e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # 0692 # Dec 2010 # 4.6518 # 2.5397 # # # # # # # # # # # # # # # 0997 # 23-Apr-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.8010e-001 # -0.4816 # 1.4264e-003 # 2.8936e-005 # -9.0212e-007 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 1.5600 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2216 # June 2012 # 1.30000000e+001 # # 0.0427 # # # # datcnv_date = Oct 24 2012 16:49:23, 7.21d [datcnv_vars = 11] # datcnv_in = P:\Cruise_Data_Processing\2012-49\RAW\CTD\2012-49-0045.hex P:\Crui se_Data_Processing\2012-49\Processing\doc\2012-49-ctd-new.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = Oct 25 2012 07:36:27, 7.21d # wildedit_in = P:\Cruise_Data_Processing\2012-49\Processing\convert\2012-49-004 5.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Oct 25 2012 11:24:53, 7.21d # alignctd_in = P:\Cruise_Data_Processing\2012-49\Processing\wildedit\2012-49-00 45.cnv # alignctd_adv = sbeox0V 4.000 # celltm_date = Oct 25 2012 12:57:19, 7.21d # celltm_in = P:\Cruise_Data_Processing\2012-49\Processing\align\2012-49-0045.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 9.0000, 9.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Oct 25 2012 13:00:43, 7.21d [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2012-49\Processing\celltm\2012-49-0045.c nv P:\Cruise_Data_Processing\2012-57\Processing\doc\2012-57-ctd-new.xmlcon # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = yes # file_type = ascii END* CTDEDIT was used to remove records near the surface and bottom of the cast; salinity was cleaned lightly. Data Processing Notes: ---------------------------------------------------------------------- Fluorescence data are nominal and unedited, except that some records were removed in editing temperature and salinity. There was no calibration sampling for dissolved oxygen, but the results of cruise 2012-01 were used to derive DO concentration. A small correction was later added based on negative DO values found in the anoxic layer of Saanich Inlet. There was no calibration sampling for salinity, but the results of cruise 2012-01 in February 2012 suggest calibration drift is <0.001. The SBE pH sensor data has been removed from this file since there was no field calibration information available and there are concerns about how the sensor performs. For details on processing see processing report: 2012-49-proc.doc. ---------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.48E-01 1) $END !--1--- ---2---- ---3--- ---4---- --5--- --6-- -7-- !Pressu Temperat Fluores Salinity Oxygen Oxyge Numb !re ure: cence: :T0:C0 : n: er_o ! Primary URU: Dissol Disso ~bin ! Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- -------- ------ ----- ---- *END OF HEADER 4.1 10.3892 0.430 30.5371 4.30 187.6 45 5.0 10.1249 0.479 30.5698 4.12 179.8 43 6.0 9.7557 0.511 30.5942 4.04 176.3 29 7.0 9.6051 0.660 30.6572 4.01 174.9 41 8.0 9.4963 0.690 30.7023 4.00 174.5 34 9.0 9.4480 0.807 30.7213 3.99 174.0 38 10.0 9.4211 0.920 30.7379 3.98 173.4 37 11.0 9.3975 1.044 30.7537 3.95 172.4 40 12.0 9.3524 1.104 30.7947 3.94 172.0 41 13.0 9.3343 1.143 30.8164 3.92 171.0 41 14.0 9.3169 1.120 30.8380 3.91 170.4 37 15.0 9.2983 1.081 30.8721 3.89 169.4 46 16.0 9.2777 1.108 30.8990 3.86 168.2 47 17.0 9.2556 1.104 30.9257 3.84 167.4 38 18.0 9.2339 1.166 30.9582 3.82 166.7 41 19.0 9.2090 1.004 30.9985 3.80 165.6 44 20.0 9.1874 1.025 31.0188 3.78 165.0 46 21.0 9.1714 0.999 31.0436 3.74 163.3 45 22.0 9.1303 0.901 31.0692 3.73 162.4 45 23.0 9.1102 0.867 31.0785 3.71 161.7 44 24.0 9.0840 0.822 31.0996 3.69 160.9 42 25.0 9.0715 0.777 31.1126 3.66 159.6 41 26.0 9.0433 0.808 31.1496 3.64 158.7 44 27.0 9.0155 0.778 31.1926 3.61 157.4 46 28.0 8.9811 0.760 31.2402 3.58 156.2 42 29.0 8.9533 0.687 31.2703 3.56 155.3 44 30.0 8.9251 0.736 31.3069 3.55 154.7 47 31.0 8.9087 0.767 31.3438 3.52 153.4 44 32.0 8.8632 0.728 31.4126 3.50 152.7 45 33.0 8.8445 0.644 31.4394 3.50 152.5 50 34.0 8.8277 0.669 31.4656 3.48 151.7 45 35.0 8.8125 0.675 31.4816 3.48 151.8 45 36.0 8.8128 0.649 31.4816 3.48 151.5 40 37.0 8.8020 0.644 31.4936 3.47 151.2 37 38.0 8.8026 0.627 31.4930 3.47 151.2 38 39.0 8.8006 0.646 31.4961 3.47 151.2 40 40.0 8.7962 0.612 31.5021 3.47 151.4 41 41.0 8.7976 0.647 31.5005 3.47 151.0 38 42.0 8.7954 0.617 31.5036 3.46 150.7 38 43.0 8.7894 0.609 31.5117 3.45 150.2 37 44.0 8.7792 0.657 31.5249 3.44 149.9 37 45.0 8.7722 0.649 31.5332 3.43 149.7 38 46.0 8.7617 0.602 31.5455 3.41 148.6 40 47.0 8.7510 0.617 31.5579 3.38 147.2 38 48.0 8.7134 0.602 31.6021 3.35 146.2 37 49.0 8.6837 0.593 31.6387 3.34 145.3 37 50.0 8.6575 0.590 31.6731 3.32 144.8 38 51.0 8.6379 0.562 31.6965 3.32 144.5 36 52.0 8.6274 0.567 31.7103 3.31 144.1 36 53.0 8.6160 0.577 31.7250 3.29 143.3 36 54.0 8.6037 0.578 31.7369 3.28 142.7 35 55.0 8.5832 0.552 31.7603 3.27 142.3 36 56.0 8.5701 0.580 31.7801 3.26 141.9 35 57.0 8.5610 0.565 31.7927 3.25 141.7 36 58.0 8.5557 0.578 31.7969 3.24 141.2 37 59.0 8.5435 0.573 31.8099 3.23 140.8 35 60.0 8.5323 0.570 31.8258 3.23 140.7 33 61.0 8.5287 0.567 31.8329 3.23 140.6 36 62.0 8.5226 0.575 31.8497 3.22 140.3 35 63.0 8.5109 0.552 31.8725 3.22 140.1 35 64.0 8.5028 0.551 31.8877 3.21 140.1 34 65.0 8.4996 0.547 31.8928 3.20 139.4 37 66.0 8.4909 0.574 31.8969 3.19 139.0 24 67.0 8.4864 0.550 31.8980 3.18 138.5 26 68.0 8.4817 0.540 31.9008 3.16 137.8 26 69.0 8.4651 0.560 31.9191 3.15 137.2 39 70.0 8.4412 0.544 31.9447 3.13 136.6 37 71.0 8.4286 0.524 31.9589 3.11 135.3 37 72.0 8.3983 0.573 32.0138 3.08 134.0 36 73.0 8.3604 0.528 32.0634 3.07 133.5 37 74.0 8.3204 0.537 32.1101 3.04 132.5 39 75.0 8.3425 0.529 32.0854 2.98 129.9 36 76.0 8.2584 0.527 32.1800 2.97 129.2 36 77.0 8.2310 0.499 32.2106 2.97 129.2 37 78.1 8.1999 0.515 32.2462 2.96 128.9 53