*2013/12/16 15:38:27.89 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2012/07/05 18:09:37.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 74 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 407E2DCD NUMBER OF CHANNELS : 7 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 3.27 75.599 2 Temperature:Primary 'deg C (ITS90)' 9.0544 10.0234 3 Fluorescence:URU:Wetlabs mg/m^3 0.541 1.124 4 Salinity:T0:C0 PSS-78 29.6967 31.021 5 Oxygen:Dissolved:SBE mL/L 3.623 4.28 6 Oxygen:Dissolved:SBE umol/kg 157.9509 186.8101 7 Number_of_bin_records n/a 14 58 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 6 F ' ' 1 7 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2012-49\Pro $END *ADMINISTRATION MISSION : 2012-49 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : Strait of Georgia Juvenile Salmon Survey SCIENTIST : Neville C. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Strait of Georgia / Juan de Fuca Strait STATION : 144 EVENT NUMBER : 44 LATITUDE : 48 22.37000 N ! (deg min) LONGITUDE : 122 43.44000 W ! (deg min) WATER DEPTH : 96 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0443 $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.1.2 2012/10/25 14:40:05 7559 7559 CLEAN 5.0.4 2012/10/25 14:46:00 7559 7559 MERGEHDR 1.1 2012/10/25 15:29:23 7559 7559 SHIFTDAT 3.4 2012/10/25 15:47:49 7559 7559 SHIFTDAT 3.4 2012/11/01 13:15:45 7559 7559 SHIFTDAT 3.4 2012/11/01 13:19:01 7559 7559 DELETE 6.3 2012/11/01 13:42:15 7559 2178 CTDEDIT 4.61 2012/11/01 16:28:21 2178 2068 CALIB 11.7 2012/11/01 17:12:53 2068 2068 FILTERS 4.3 2012/11/01 17:14:57 2068 2068 BINAVE 4.1.1 2012/11/01 17:15:54 2068 74 REMOVECH 8.1.1 2012/11/01 17:16:34 74 74 CHGUNITS 3.0 2012/11/01 17:17:58 74 74 MERGEHDR 1.1 2012/11/01 17:26:28 74 74 REORDER 1.3 2012/11/01 17:27:58 ? ? HDREDIT2 2.5.1 2012/11/01 17:34:25 ? ? CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:38:27 74 74 $END $REMARKS -CLEAN functions: 2012/10/25 14:42:58 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:Wetlabs:ECO-AFL # of Records to Advance (-ve for Delay): At REC# 0 Shift= 12.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 65.86 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT 2012/11/01 16:28:21 110 records were deleted in this editing session. No data values were changed. -CALIB parameters: 2012/11/01 17:12:53 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2012-49\Processing\doc\2012-49-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 14 Oxygen:Dissolved:SBE mL/L 10 0.4800000E-01 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:Wetlabs:ECO-AFL Fluorescence:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2012/11/01 17:16:34 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] pH:SBE [pH Units] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2012/11/01 17:34:25 Applied edit header: P:\Cruise_Data_Processing\2012-49\Processing\doc\2012-49-HDR.TXT Channel 1: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: Salinity:Practical:T0:C0 [PSS-78] Name: Salinity:T0:C0 ==> Salinity:Practical:T0:C0 $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2012-03A\2012-03A-0044hex.hex Software Version Seasave V 7.21d Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jul 05 2012 18:07:39 NMEA Latitude = 48 22.37 N NMEA Longitude = 122 43.44 W NMEA UTC (Time) = Jul 05 2012 18:09:37 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2012-03 Station: Depth(m): System UTC = Jul 05 2012 17:07:39 # nquan = 15 # nvalues = 7559 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity, Practical [PSU] # name 12 = sal11: Salinity, Practical, 2 [PSU] # name 13 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 14 = flag: flag # span 0 = 1, 7559 # span 1 = 1.637, 75.864 # span 2 = 9.0506, 14.5665 # span 3 = 9.0489, 15.1810 # span 4 = -0.035957, 3.364405 # span 5 = -0.164565, 3.368045 # span 6 = -0.5551, 64.4449 # span 7 = 1.6838, 2.5238 # span 8 = 4.777, 8.859 # span 9 = -1.579, 1.569 # span 10 = 0, 1 # span 11 = 0.0000, 31.0266 # span 12 = 0.0000, 31.0302 # span 13 = 3.56715, 6.60051 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Jul 05 2012 18:09:37 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 63507 # 12-Apr-11 # -4.435468e+004 # -1.845750e-001 # 1.192740e-002 # 3.979900e-002 # 0.000000e+000 # 2.993572e+001 # -3.336200e-004 # 3.759160e-006 # 1.565300e-009 # 0.99986626 # 5.62145 # 0.000000e+000 # 1.283280e-002 # -9.295010e+000 # # # # # # 2710 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.36717391e-003 # 6.46683268e-004 # 2.34981097e-005 # 2.22352352e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2128 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.01926507e+001 # 1.46093888e+000 # -2.51557628e-003 # 2.74924248e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # 0692 # Dec 2010 # 4.6518 # 2.5397 # # # # # # # # # # # # # # # 0997 # 23-Apr-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.8010e-001 # -0.4816 # 1.4264e-003 # 2.8936e-005 # -9.0212e-007 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 1.5600 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2216 # June 2012 # 1.30000000e+001 # # 0.0427 # # # # datcnv_date = Oct 24 2012 16:49:22, 7.21d [datcnv_vars = 11] # datcnv_in = P:\Cruise_Data_Processing\2012-49\RAW\CTD\2012-49-0044.hex P:\Crui se_Data_Processing\2012-49\Processing\doc\2012-49-ctd-new.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = Oct 25 2012 07:36:26, 7.21d # wildedit_in = P:\Cruise_Data_Processing\2012-49\Processing\convert\2012-49-004 4.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Oct 25 2012 11:24:52, 7.21d # alignctd_in = P:\Cruise_Data_Processing\2012-49\Processing\wildedit\2012-49-00 44.cnv # alignctd_adv = sbeox0V 4.000 # celltm_date = Oct 25 2012 12:57:19, 7.21d # celltm_in = P:\Cruise_Data_Processing\2012-49\Processing\align\2012-49-0044.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 9.0000, 9.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Oct 25 2012 13:00:38, 7.21d [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2012-49\Processing\celltm\2012-49-0044.c nv P:\Cruise_Data_Processing\2012-57\Processing\doc\2012-57-ctd-new.xmlcon # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = yes # file_type = ascii END* CTDEDIT was used to remove records near the surface and bottom of the cast. Data Processing Notes: ---------------------------------------------------------------------- Fluorescence data are nominal and unedited, except that some records were removed in editing temperature and salinity. There was no calibration sampling for dissolved oxygen, but the results of cruise 2012-01 were used to derive DO concentration. A small correction was later added based on negative DO values found in the anoxic layer of Saanich Inlet. There was no calibration sampling for salinity, but the results of cruise 2012-01 in February 2012 suggest calibration drift is <0.001. The SBE pH sensor data has been removed from this file since there was no field calibration information available and there are concerns about how the sensor performs. For details on processing see processing report: 2012-49-proc.doc. ---------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.48E-01 1) $END !--1--- ---2---- ---3--- ---4---- --5--- --6-- -7-- !Pressu Temperat Fluores Salinity Oxygen Oxyge Numb !re ure: cence: :T0:C0 : n: er_o ! Primary URU: Dissol Disso ~bin ! Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- -------- ------ ----- ---- *END OF HEADER 3.3 10.0234 0.604 29.6967 4.28 186.8 19 4.0 10.0080 0.616 29.7084 4.28 186.8 41 4.9 9.9639 0.698 29.7498 4.28 186.6 25 6.0 9.9606 0.846 29.7489 4.27 186.3 31 7.0 9.9586 0.984 29.7515 4.26 186.1 31 8.0 9.9433 0.981 29.7631 4.25 185.3 31 9.0 9.9326 1.062 29.7707 4.21 183.8 30 10.0 9.9018 1.055 29.7993 4.19 182.9 30 11.0 9.8434 1.111 29.8597 4.18 182.5 30 12.0 9.8177 1.116 29.8887 4.18 182.4 29 13.0 9.8026 0.991 29.9073 4.20 183.1 30 14.0 9.8105 1.092 29.8955 4.20 183.1 28 15.0 9.8215 1.124 29.8811 4.18 182.5 29 16.0 9.8245 1.005 29.8776 4.17 182.2 29 17.0 9.7943 0.995 29.9177 4.18 182.4 28 18.0 9.8020 1.059 29.9069 4.17 181.8 31 19.0 9.8108 1.026 29.8965 4.16 181.5 33 20.0 9.7796 1.036 29.9428 4.15 181.1 25 21.0 9.7682 0.991 29.9591 4.15 181.1 28 22.0 9.7654 0.977 29.9635 4.15 181.3 30 23.0 9.7649 0.958 29.9640 4.15 181.2 30 24.0 9.7664 0.914 29.9640 4.16 181.3 31 25.0 9.7675 0.983 29.9637 4.15 181.0 27 26.0 9.7738 0.910 29.9550 4.15 180.9 28 27.0 9.7692 1.006 29.9621 4.15 181.2 26 28.0 9.7670 1.035 29.9662 4.15 181.2 27 29.0 9.7650 0.957 29.9694 4.15 181.1 28 30.0 9.7697 0.942 29.9633 4.14 180.7 25 31.0 9.7618 0.923 29.9748 4.14 180.7 28 32.0 9.7611 1.000 29.9759 4.14 180.7 26 33.0 9.7565 0.874 29.9813 4.14 180.7 25 34.0 9.7565 0.936 29.9808 4.13 180.3 24 35.0 9.7631 0.924 29.9702 4.12 180.0 25 36.0 9.7537 0.885 29.9857 4.13 180.1 26 37.0 9.7410 0.923 30.0049 4.13 180.1 27 38.0 9.7474 0.894 29.9957 4.13 180.4 26 39.0 9.7449 0.923 29.9996 4.14 180.6 27 40.0 9.7535 0.952 29.9863 4.13 180.3 26 41.0 9.7610 0.967 29.9751 4.13 180.2 25 42.0 9.7525 0.955 29.9893 4.11 179.5 26 43.0 9.7459 0.924 29.9991 4.07 177.6 25 44.0 9.7440 0.932 30.0008 4.00 174.5 26 45.0 9.7030 0.876 30.0607 3.94 171.7 24 46.0 9.6191 0.844 30.1828 3.91 170.7 24 47.0 9.4896 0.828 30.3682 3.90 170.1 24 48.0 9.4754 0.774 30.3878 3.89 169.9 24 49.0 9.4382 0.795 30.4413 3.89 169.7 26 50.0 9.4201 0.740 30.4667 3.90 170.0 27 51.0 9.4160 0.710 30.4729 3.90 170.3 26 52.0 9.4156 0.689 30.4745 3.90 170.1 26 53.0 9.4262 0.733 30.4596 3.88 169.1 25 54.0 9.4300 0.764 30.4551 3.84 167.6 24 55.0 9.4138 0.704 30.4782 3.81 166.0 23 56.0 9.4013 0.716 30.4983 3.79 165.3 24 57.0 9.2936 0.702 30.6560 3.78 164.7 24 58.0 9.2844 0.673 30.6674 3.74 163.1 25 59.0 9.2665 0.654 30.6947 3.71 161.9 24 60.0 9.2431 0.670 30.7311 3.70 161.5 25 61.0 9.1607 0.629 30.8537 3.70 161.5 27 62.0 9.1649 0.593 30.8470 3.70 161.3 24 63.0 9.1590 0.593 30.8560 3.69 160.9 27 64.0 9.1422 0.582 30.8825 3.68 160.3 26 65.0 9.1329 0.598 30.8968 3.67 159.9 24 66.0 9.1190 0.576 30.9186 3.66 159.6 26 67.0 9.1099 0.592 30.9328 3.66 159.4 30 68.0 9.0988 0.581 30.9501 3.66 159.4 30 69.0 9.0907 0.546 30.9628 3.65 159.1 33 70.0 9.0858 0.548 30.9705 3.64 158.8 34 71.0 9.0843 0.549 30.9732 3.64 158.7 34 72.0 9.0759 0.551 30.9867 3.64 158.6 36 73.0 9.0717 0.563 30.9932 3.64 158.6 37 73.8 9.0655 0.555 31.0031 3.63 158.4 26 75.1 9.0579 0.541 31.0157 3.63 158.1 58 75.6 9.0544 0.580 31.0210 3.62 158.0 14