*2013/12/16 15:38:27.84 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2012/07/05 14:06:37.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 115 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : D93833FD NUMBER OF CHANNELS : 7 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 4.141 117.576 2 Temperature:Primary 'deg C (ITS90)' 8.1424 9.596 3 Fluorescence:URU:Wetlabs mg/m^3 0.458 1.199 4 Salinity:T0:C0 PSS-78 30.6662 32.295 5 Oxygen:Dissolved:SBE mL/L 2.895 4.175 6 Oxygen:Dissolved:SBE umol/kg 126.0729 182.0802 7 Number_of_bin_records n/a 6 39 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 6 F ' ' 1 7 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2012-49\Pro $END *ADMINISTRATION MISSION : 2012-49 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : Strait of Georgia Juvenile Salmon Survey SCIENTIST : Neville C. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Strait of Georgia / Juan de Fuca Strait STATION : 138 EVENT NUMBER : 43 LATITUDE : 48 22.84000 N ! (deg min) LONGITUDE : 123 5.31000 W ! (deg min) WATER DEPTH : 137 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0443 $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.1.2 2012/10/25 14:40:02 10673 10673 CLEAN 5.0.4 2012/10/25 14:45:57 10673 10673 MERGEHDR 1.1 2012/10/25 15:29:20 10673 10673 SHIFTDAT 3.4 2012/10/25 15:47:45 10673 10673 SHIFTDAT 3.4 2012/11/01 13:15:42 10673 10673 SHIFTDAT 3.4 2012/11/01 13:18:57 10673 10673 DELETE 6.3 2012/11/01 13:42:13 10673 3495 CTDEDIT 4.61 2012/11/01 16:26:41 3495 3371 CALIB 11.7 2012/11/01 17:12:53 3371 3371 FILTERS 4.3 2012/11/01 17:14:57 3371 3371 BINAVE 4.1.1 2012/11/01 17:15:54 3371 115 REMOVECH 8.1.1 2012/11/01 17:16:34 115 115 CHGUNITS 3.0 2012/11/01 17:17:58 115 115 MERGEHDR 1.1 2012/11/01 17:26:28 115 115 REORDER 1.3 2012/11/01 17:27:58 ? ? HDREDIT2 2.5.1 2012/11/01 17:34:25 ? ? CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:38:27 115 115 $END $REMARKS -CLEAN functions: 2012/10/25 14:42:58 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:Wetlabs:ECO-AFL # of Records to Advance (-ve for Delay): At REC# 0 Shift= 12.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 108.01 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT 2012/11/01 16:26:41 124 records were deleted in this editing session. No data values were changed. -CALIB parameters: 2012/11/01 17:12:53 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2012-49\Processing\doc\2012-49-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 14 Oxygen:Dissolved:SBE mL/L 10 0.4800000E-01 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:Wetlabs:ECO-AFL Fluorescence:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2012/11/01 17:16:34 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] pH:SBE [pH Units] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2012/11/01 17:34:25 Applied edit header: P:\Cruise_Data_Processing\2012-49\Processing\doc\2012-49-HDR.TXT Channel 1: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: Salinity:Practical:T0:C0 [PSS-78] Name: Salinity:T0:C0 ==> Salinity:Practical:T0:C0 $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2012-03A\2012-03A-0043hex.hex Software Version Seasave V 7.21d Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jul 05 2012 14:04:39 NMEA Latitude = 48 22.84 N NMEA Longitude = 123 05.31 W NMEA UTC (Time) = Jul 05 2012 14:06:37 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2012-03 Station: Depth(m): System UTC = Jul 05 2012 13:04:39 # nquan = 15 # nvalues = 10673 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity, Practical [PSU] # name 12 = sal11: Salinity, Practical, 2 [PSU] # name 13 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 14 = flag: flag # span 0 = 1, 10673 # span 1 = 0.378, 118.011 # span 2 = 8.1417, 12.7972 # span 3 = 8.1417, 15.2436 # span 4 = -0.255729, 3.386062 # span 5 = 0.021967, 3.401193 # span 6 = -0.5551, 64.4449 # span 7 = 1.4298, 2.5739 # span 8 = 4.887, 8.815 # span 9 = -2.489, 2.880 # span 10 = 0, 1 # span 11 = 0.0000, 32.2962 # span 12 = 0.0000, 32.2977 # span 13 = 2.83751, 7.06102 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Jul 05 2012 14:06:37 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 63507 # 12-Apr-11 # -4.435468e+004 # -1.845750e-001 # 1.192740e-002 # 3.979900e-002 # 0.000000e+000 # 2.993572e+001 # -3.336200e-004 # 3.759160e-006 # 1.565300e-009 # 0.99986626 # 5.62145 # 0.000000e+000 # 1.283280e-002 # -9.295010e+000 # # # # # # 2710 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.36717391e-003 # 6.46683268e-004 # 2.34981097e-005 # 2.22352352e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2128 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.01926507e+001 # 1.46093888e+000 # -2.51557628e-003 # 2.74924248e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # 0692 # Dec 2010 # 4.6518 # 2.5397 # # # # # # # # # # # # # # # 0997 # 23-Apr-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.8010e-001 # -0.4816 # 1.4264e-003 # 2.8936e-005 # -9.0212e-007 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 1.5600 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2216 # June 2012 # 1.30000000e+001 # # 0.0427 # # # # datcnv_date = Oct 24 2012 16:49:20, 7.21d [datcnv_vars = 11] # datcnv_in = P:\Cruise_Data_Processing\2012-49\RAW\CTD\2012-49-0043.hex P:\Crui se_Data_Processing\2012-49\Processing\doc\2012-49-ctd-new.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = Oct 25 2012 07:36:25, 7.21d # wildedit_in = P:\Cruise_Data_Processing\2012-49\Processing\convert\2012-49-004 3.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Oct 25 2012 11:24:51, 7.21d # alignctd_in = P:\Cruise_Data_Processing\2012-49\Processing\wildedit\2012-49-00 43.cnv # alignctd_adv = sbeox0V 4.000 # celltm_date = Oct 25 2012 12:57:18, 7.21d # celltm_in = P:\Cruise_Data_Processing\2012-49\Processing\align\2012-49-0043.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 9.0000, 9.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Oct 25 2012 13:00:36, 7.21d [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2012-49\Processing\celltm\2012-49-0043.c nv P:\Cruise_Data_Processing\2012-57\Processing\doc\2012-57-ctd-new.xmlcon # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = yes # file_type = ascii END* CTDEDIT was used to remove records near the surface and bottom of the cast;. Data Processing Notes: ---------------------------------------------------------------------- Fluorescence data are nominal and unedited, except that some records were removed in editing temperature and salinity. There was no calibration sampling for dissolved oxygen, but the results of cruise 2012-01 were used to derive DO concentration. A small correction was later added based on negative DO values found in the anoxic layer of Saanich Inlet. There was no calibration sampling for salinity, but the results of cruise 2012-01 in February 2012 suggest calibration drift is <0.001. The SBE pH sensor data has been removed from this file since there was no field calibration information available and there are concerns about how the sensor performs. For details on processing see processing report: 2012-49-proc.doc. ---------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.48E-01 1) $END !--1--- ---2---- ---3--- ---4---- --5--- --6-- -7-- !Pressu Temperat Fluores Salinity Oxygen Oxyge Numb !re ure: cence: :T0:C0 : n: er_o ! Primary URU: Dissol Disso ~bin ! Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- -------- ------ ----- ---- *END OF HEADER 4.1 9.5953 0.794 30.6676 4.18 182.1 37 5.0 9.5960 0.982 30.6662 4.15 181.1 36 6.0 9.5828 1.109 30.6716 4.12 179.7 38 7.0 9.5576 1.199 30.6884 4.10 178.6 32 8.0 9.5330 1.094 30.7126 4.09 178.1 32 9.0 9.5217 1.071 30.7243 4.08 178.1 30 10.0 9.5169 1.105 30.7290 4.08 177.8 30 11.0 9.5201 1.131 30.7272 4.08 177.8 29 12.0 9.5181 1.120 30.7287 4.08 177.8 30 13.0 9.5166 1.050 30.7306 4.06 177.2 29 14.0 9.5132 1.075 30.7337 4.07 177.3 27 15.0 9.5098 1.091 30.7366 4.07 177.5 30 16.0 9.5079 1.091 30.7389 4.07 177.4 29 17.0 9.5084 1.111 30.7389 4.07 177.3 29 18.0 9.5076 1.094 30.7392 4.06 177.1 29 19.0 9.5074 1.077 30.7403 4.04 176.3 28 20.0 9.5061 1.037 30.7426 4.03 175.9 29 21.0 9.4986 1.002 30.7493 4.02 175.3 30 22.0 9.4942 0.958 30.7506 4.01 174.7 29 23.0 9.4873 0.976 30.7547 4.01 174.9 28 24.0 9.4814 1.025 30.7581 4.01 175.0 28 25.0 9.4799 0.973 30.7592 4.01 174.7 28 26.0 9.4749 1.012 30.7621 4.00 174.5 27 27.0 9.4712 0.971 30.7640 3.99 173.9 29 28.0 9.4657 0.968 30.7674 3.98 173.7 29 29.0 9.4475 0.999 30.7802 3.98 173.6 27 30.0 9.4408 0.933 30.7857 3.98 173.4 24 31.0 9.4309 0.961 30.8027 3.98 173.5 27 32.0 9.4276 0.941 30.8112 3.98 173.5 28 33.0 9.4281 0.927 30.8159 3.98 173.7 28 34.0 9.4282 0.946 30.8181 3.99 173.9 27 35.0 9.4375 1.030 30.8260 3.98 173.6 27 36.0 9.4430 1.008 30.8327 3.96 172.7 28 37.0 9.4147 1.006 30.8612 3.93 171.3 28 38.0 9.3885 0.994 30.8858 3.87 168.6 27 39.0 9.3481 0.990 30.9230 3.81 166.2 27 40.0 9.2514 0.867 31.0041 3.80 165.5 26 41.0 9.1774 0.892 31.0717 3.80 165.5 29 42.0 9.1608 0.815 31.0880 3.80 165.5 29 43.0 9.1559 0.793 31.0919 3.79 165.3 28 44.0 9.1530 0.794 31.0940 3.79 165.1 27 45.0 9.1500 0.763 31.0961 3.78 164.9 26 46.0 9.1438 0.797 31.1009 3.78 164.9 28 47.0 9.1360 0.802 31.1071 3.78 164.6 27 48.0 9.1328 0.802 31.1096 3.77 164.4 29 49.0 9.1297 0.754 31.1128 3.77 164.1 28 50.0 9.1278 0.812 31.1148 3.77 164.3 28 51.0 9.1252 0.765 31.1173 3.77 164.1 28 52.0 9.1216 0.823 31.1210 3.75 163.5 28 53.0 9.1152 0.796 31.1272 3.75 163.3 29 54.0 9.1121 0.766 31.1305 3.74 163.3 29 55.0 9.1075 0.777 31.1348 3.75 163.4 28 56.0 9.1060 0.748 31.1365 3.75 163.4 28 57.0 9.1038 0.732 31.1390 3.75 163.6 30 58.0 9.1026 0.772 31.1403 3.75 163.3 31 59.0 9.1023 0.768 31.1410 3.74 163.3 30 60.0 9.1014 0.739 31.1421 3.74 163.2 30 61.0 9.1011 0.740 31.1427 3.75 163.3 29 62.0 9.1012 0.793 31.1431 3.74 163.1 30 63.0 9.1001 0.745 31.1446 3.74 163.1 32 64.0 9.0992 0.747 31.1460 3.74 163.0 31 65.0 9.0993 0.751 31.1460 3.74 163.0 30 66.0 9.0985 0.797 31.1473 3.73 162.6 29 67.0 9.0985 0.762 31.1476 3.71 161.6 29 68.0 9.0814 0.766 31.1660 3.69 161.0 29 69.0 9.0634 0.750 31.1841 3.68 160.3 32 70.0 9.0469 0.716 31.2003 3.66 159.6 30 71.0 9.0447 0.772 31.2025 3.65 159.0 31 72.0 9.0059 0.772 31.2411 3.65 158.9 30 73.0 8.9997 0.780 31.2476 3.64 158.8 30 74.0 8.9979 0.732 31.2509 3.64 158.6 29 75.0 8.9911 0.782 31.2605 3.63 158.3 32 76.0 8.9860 0.719 31.2667 3.62 157.7 30 77.0 8.9769 0.733 31.2769 3.61 157.3 30 78.0 8.9611 0.711 31.2932 3.59 156.3 29 79.0 8.9491 0.726 31.3048 3.56 155.1 29 80.0 8.9320 0.681 31.3210 3.54 154.3 29 81.0 8.8936 0.646 31.3654 3.52 153.5 26 82.0 8.8697 0.606 31.3921 3.50 152.5 28 83.0 8.8611 0.668 31.4018 3.47 151.1 31 84.0 8.8260 0.654 31.4421 3.42 149.0 31 85.0 8.7885 0.587 31.4856 3.37 146.8 29 86.0 8.7352 0.607 31.5486 3.31 144.4 29 87.0 8.6832 0.608 31.6139 3.28 142.9 29 88.0 8.5996 0.593 31.7177 3.28 142.7 30 89.0 8.5733 0.565 31.7491 3.28 142.7 28 90.0 8.5701 0.570 31.7533 3.27 142.5 28 91.0 8.5648 0.530 31.7601 3.26 141.9 28 92.0 8.5558 0.529 31.7716 3.25 141.8 31 93.0 8.5436 0.550 31.7860 3.24 141.0 30 94.0 8.5412 0.502 31.7887 3.21 140.0 28 95.0 8.5286 0.531 31.8039 3.19 139.1 27 96.0 8.4954 0.524 31.8441 3.17 138.1 29 97.0 8.4731 0.539 31.8723 3.15 137.1 28 98.0 8.4548 0.486 31.8951 3.12 135.9 29 99.0 8.4268 0.496 31.9305 3.11 135.3 29 100.0 8.3877 0.501 31.9803 3.10 134.9 28 101.0 8.3776 0.489 31.9928 3.09 134.4 29 102.0 8.3687 0.475 32.0043 3.08 133.9 29 103.0 8.3565 0.474 32.0200 3.06 133.3 28 104.0 8.3458 0.502 32.0334 3.04 132.4 28 105.0 8.3314 0.490 32.0522 3.02 131.4 28 106.0 8.2995 0.463 32.0923 3.01 131.1 27 107.0 8.2809 0.469 32.1155 3.00 130.7 27 108.0 8.2771 0.483 32.1174 2.99 130.3 22 109.0 8.2583 0.469 32.1448 2.98 129.6 28 110.0 8.2454 0.468 32.1609 2.97 129.4 27 111.0 8.2325 0.459 32.1775 2.97 129.3 28 112.0 8.2262 0.471 32.1859 2.96 129.1 29 113.0 8.2211 0.458 32.1927 2.95 128.7 35 114.0 8.2145 0.475 32.2016 2.95 128.3 38 115.0 8.2013 0.515 32.2187 2.92 127.3 38 116.0 8.1840 0.484 32.2409 2.90 126.1 39 117.0 8.1511 0.485 32.2841 2.90 126.1 37 117.6 8.1424 0.470 32.2950 2.89 126.1 6