*2013/12/16 15:38:27.76 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2012/07/04 18:02:40.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 61 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 88A2FBA8 NUMBER OF CHANNELS : 7 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 4.016 63.758 2 Temperature:Primary 'deg C (ITS90)' 8.979 11.9474 3 Fluorescence:URU:Wetlabs mg/m^3 0.413 13.818 4 Salinity:T0:C0 PSS-78 28.539 30.3935 5 Oxygen:Dissolved:SBE mL/L 3.326 6.985 6 Oxygen:Dissolved:SBE umol/kg 145.0705 305.2412 7 Number_of_bin_records n/a 18 48 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 6 F ' ' 1 7 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2012-49\Pro $END *ADMINISTRATION MISSION : 2012-49 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : Strait of Georgia Juvenile Salmon Survey SCIENTIST : Neville C. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Strait of Georgia / Juan de Fuca Strait STATION : 134 EVENT NUMBER : 41 LATITUDE : 48 42.29000 N ! (deg min) LONGITUDE : 123 28.83000 W ! (deg min) WATER DEPTH : 78 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0443 $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.1.2 2012/10/25 14:39:54 8251 8251 CLEAN 5.0.4 2012/10/25 14:45:48 8251 8251 MERGEHDR 1.1 2012/10/25 15:29:12 8251 8251 SHIFTDAT 3.4 2012/10/25 15:47:37 8251 8251 SHIFTDAT 3.4 2012/11/01 13:15:33 8251 8251 SHIFTDAT 3.4 2012/11/01 13:18:49 8251 8251 DELETE 6.3 2012/11/01 13:42:05 8251 2050 CTDEDIT 4.61 2012/11/01 16:19:59 2050 1812 CALIB 11.7 2012/11/01 17:12:49 1812 1812 FILTERS 4.3 2012/11/01 17:14:53 1812 1812 BINAVE 4.1.1 2012/11/01 17:15:52 1812 61 REMOVECH 8.1.1 2012/11/01 17:16:34 61 61 CHGUNITS 3.0 2012/11/01 17:17:58 61 61 MERGEHDR 1.1 2012/11/01 17:26:28 61 61 REORDER 1.3 2012/11/01 17:27:58 ? ? HDREDIT2 2.5.1 2012/11/01 17:34:25 ? ? CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:38:27 61 61 $END $REMARKS -CLEAN functions: 2012/10/25 14:42:58 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:Wetlabs:ECO-AFL # of Records to Advance (-ve for Delay): At REC# 0 Shift= 12.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 54.25 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT 2012/11/01 16:19:59 238 records were deleted in this editing session. 10 changes in channel Salinity:T0:C0 -CALIB parameters: 2012/11/01 17:12:49 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2012-49\Processing\doc\2012-49-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 14 Oxygen:Dissolved:SBE mL/L 10 0.4800000E-01 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:Wetlabs:ECO-AFL Fluorescence:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2012/11/01 17:16:34 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] pH:SBE [pH Units] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2012/11/01 17:34:25 Applied edit header: P:\Cruise_Data_Processing\2012-49\Processing\doc\2012-49-HDR.TXT Channel 1: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: Salinity:Practical:T0:C0 [PSS-78] Name: Salinity:T0:C0 ==> Salinity:Practical:T0:C0 $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2012-03A\2012-03A-0041hex.hex Software Version Seasave V 7.21d Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jul 04 2012 18:00:43 NMEA Latitude = 48 42.29 N NMEA Longitude = 123 28.83 W NMEA UTC (Time) = Jul 04 2012 18:02:40 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2012-03 Station: Depth(m): System UTC = Jul 04 2012 17:00:43 # nquan = 15 # nvalues = 8251 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity, Practical [PSU] # name 12 = sal11: Salinity, Practical, 2 [PSU] # name 13 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 14 = flag: flag # span 0 = 1, 8251 # span 1 = 1.277, 64.252 # span 2 = 8.9769, 13.8036 # span 3 = 8.9776, 13.8776 # span 4 = -0.180885, 3.465677 # span 5 = -0.530176, 3.469823 # span 6 = -0.2376, 36.7465 # span 7 = 1.5800, 3.1343 # span 8 = 4.768, 9.344 # span 9 = -1.440, 2.470 # span 10 = 0, 1 # span 11 = 0.0000, 30.3949 # span 12 = 0.0000, 30.3960 # span 13 = 3.26116, 7.65388 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Jul 04 2012 18:02:40 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 63507 # 12-Apr-11 # -4.435468e+004 # -1.845750e-001 # 1.192740e-002 # 3.979900e-002 # 0.000000e+000 # 2.993572e+001 # -3.336200e-004 # 3.759160e-006 # 1.565300e-009 # 0.99986626 # 5.62145 # 0.000000e+000 # 1.283280e-002 # -9.295010e+000 # # # # # # 2710 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.36717391e-003 # 6.46683268e-004 # 2.34981097e-005 # 2.22352352e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2128 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.01926507e+001 # 1.46093888e+000 # -2.51557628e-003 # 2.74924248e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # 0692 # Dec 2010 # 4.6518 # 2.5397 # # # # # # # # # # # # # # # 0997 # 23-Apr-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.8010e-001 # -0.4816 # 1.4264e-003 # 2.8936e-005 # -9.0212e-007 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 1.5600 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2216 # June 2012 # 1.30000000e+001 # # 0.0427 # # # # datcnv_date = Oct 24 2012 16:49:16, 7.21d [datcnv_vars = 11] # datcnv_in = P:\Cruise_Data_Processing\2012-49\RAW\CTD\2012-49-0041.hex P:\Crui se_Data_Processing\2012-49\Processing\doc\2012-49-ctd-new.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = Oct 25 2012 07:36:23, 7.21d # wildedit_in = P:\Cruise_Data_Processing\2012-49\Processing\convert\2012-49-004 1.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Oct 25 2012 11:24:48, 7.21d # alignctd_in = P:\Cruise_Data_Processing\2012-49\Processing\wildedit\2012-49-00 41.cnv # alignctd_adv = sbeox0V 4.000 # celltm_date = Oct 25 2012 12:57:15, 7.21d # celltm_in = P:\Cruise_Data_Processing\2012-49\Processing\align\2012-49-0041.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 9.0000, 9.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Oct 25 2012 13:00:33, 7.21d [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2012-49\Processing\celltm\2012-49-0041.c nv P:\Cruise_Data_Processing\2012-57\Processing\doc\2012-57-ctd-new.xmlcon # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = yes # file_type = ascii END* CTDEDIT was used to remove records near the surface and bottom of the cast; salinity was cleaned lightly. Data Processing Notes: ---------------------------------------------------------------------- Fluorescence data are nominal and unedited, except that some records were removed in editing temperature and salinity. There was no calibration sampling for dissolved oxygen, but the results of cruise 2012-01 were used to derive DO concentration. A small correction was later added based on negative DO values found in the anoxic layer of Saanich Inlet. There was no calibration sampling for salinity, but the results of cruise 2012-01 in February 2012 suggest calibration drift is <0.001. The SBE pH sensor data has been removed from this file since there was no field calibration information available and there are concerns about how the sensor performs. For details on processing see processing report: 2012-49-proc.doc. ---------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.48E-01 1) $END !--1--- ---2---- ---3--- ---4---- --5--- --6-- -7-- !Pressu Temperat Fluores Salinity Oxygen Oxyge Numb !re ure: cence: :T0:C0 : n: er_o ! Primary URU: Dissol Disso ~bin ! Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- -------- ------ ----- ---- *END OF HEADER 4.0 11.9474 8.198 28.5390 6.99 305.2 48 5.0 11.8954 9.313 28.5405 6.95 303.7 35 6.0 11.7544 10.982 28.5461 6.78 296.4 39 7.0 11.5989 13.818 28.5510 6.23 272.3 41 8.0 11.3786 13.569 28.5660 5.57 243.4 43 9.0 10.8911 7.919 28.6545 5.39 235.3 40 10.0 10.8098 7.254 28.7105 5.08 221.8 39 11.0 10.7333 4.221 28.7712 4.93 215.3 36 12.0 10.5472 2.891 28.8545 4.91 214.3 35 13.0 10.5121 2.956 28.8638 4.87 212.9 31 14.0 10.4342 2.930 28.8804 4.81 210.1 34 15.0 10.4022 2.678 28.8907 4.67 204.0 35 16.0 10.3277 2.678 28.9357 4.55 198.9 30 17.0 10.1816 2.323 29.0385 4.50 196.7 31 18.0 10.1104 1.954 29.1047 4.49 195.9 32 19.0 10.0606 1.619 29.1549 4.48 195.4 30 20.0 10.0423 1.580 29.1727 4.47 195.0 27 21.0 10.0223 1.667 29.1955 4.46 194.7 29 22.0 10.0199 1.551 29.2027 4.43 193.3 29 23.0 9.9994 1.554 29.2236 4.39 191.8 27 24.0 9.9742 1.416 29.2413 4.38 191.2 28 25.0 9.9365 1.352 29.2861 4.37 190.7 28 26.0 9.9239 1.294 29.2958 4.35 190.1 28 27.0 9.9177 1.401 29.2995 4.33 189.1 27 28.0 9.9111 1.199 29.3013 4.30 187.8 27 29.0 9.8932 1.221 29.3112 4.24 185.2 26 30.0 9.8664 1.156 29.3223 4.17 182.1 27 31.0 9.8200 1.030 29.3681 4.12 179.8 28 32.0 9.7171 0.891 29.4719 4.11 179.2 25 33.0 9.6546 0.824 29.5314 4.10 179.0 28 34.0 9.6408 0.804 29.5444 4.09 178.4 27 35.0 9.6227 0.797 29.5652 4.09 178.7 27 36.0 9.6146 0.751 29.5853 4.10 178.9 28 37.0 9.5995 0.755 29.6355 4.09 178.7 27 38.0 9.5882 0.720 29.6742 4.08 177.9 27 39.0 9.5776 0.728 29.7092 4.06 177.3 26 40.0 9.5541 0.685 29.7277 4.03 175.9 26 41.0 9.5446 0.675 29.7474 3.95 172.2 28 42.0 9.5249 0.673 29.7729 3.87 169.1 28 43.0 9.4048 0.585 29.8744 3.83 167.2 28 44.0 9.3565 0.572 29.9273 3.80 165.9 28 45.0 9.3150 0.540 29.9667 3.79 165.3 28 46.0 9.2876 0.538 29.9937 3.79 165.5 28 47.0 9.2811 0.542 30.0050 3.79 165.3 28 48.0 9.2835 0.542 30.0225 3.76 163.9 25 49.0 9.2848 0.558 30.0522 3.72 162.5 27 50.0 9.2482 0.552 30.0661 3.67 160.2 27 51.0 9.2308 0.515 30.0672 3.57 155.8 27 52.0 9.2179 0.534 30.0713 3.50 152.9 27 53.0 9.0498 0.484 30.2013 3.51 153.0 27 54.0 9.0340 0.461 30.2124 3.50 152.7 28 55.0 9.0247 0.458 30.2191 3.47 151.4 28 56.0 9.0260 0.413 30.2192 3.40 148.4 28 57.0 9.0129 0.429 30.2661 3.35 146.3 26 58.0 8.9951 0.424 30.3155 3.33 145.3 27 59.0 8.9812 0.414 30.3407 3.33 145.2 25 60.0 8.9846 0.454 30.3801 3.33 145.2 24 61.0 8.9837 0.480 30.3832 3.33 145.1 26 62.0 8.9829 0.419 30.3862 3.33 145.1 28 63.0 8.9798 0.433 30.3924 3.33 145.2 31 63.8 8.9790 0.463 30.3935 3.33 145.1 18