*2013/12/16 15:38:27.73 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2012/07/04 14:04:06.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 48 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : A494804B NUMBER OF CHANNELS : 7 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 3.4 49.931 2 Temperature:Primary 'deg C (ITS90)' 9.432 10.8069 3 Fluorescence:URU:Wetlabs mg/m^3 0.518 6.281 4 Salinity:T0:C0 PSS-78 28.2225 29.8202 5 Oxygen:Dissolved:SBE mL/L 3.959 5.491 6 Oxygen:Dissolved:SBE umol/kg 172.7732 239.9647 7 Number_of_bin_records n/a 15 44 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 6 F ' ' 1 7 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2012-49\Pro $END *ADMINISTRATION MISSION : 2012-49 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : Strait of Georgia Juvenile Salmon Survey SCIENTIST : Neville C. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Strait of Georgia / Juan de Fuca Strait STATION : 130 EVENT NUMBER : 40 LATITUDE : 48 43.62000 N ! (deg min) LONGITUDE : 123 32.91000 W ! (deg min) WATER DEPTH : 63 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0443 $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.1.2 2012/10/25 14:39:52 5846 5846 CLEAN 5.0.4 2012/10/25 14:45:46 5846 5846 MERGEHDR 1.1 2012/10/25 15:29:10 5846 5846 SHIFTDAT 3.4 2012/10/25 15:47:35 5846 5846 SHIFTDAT 3.4 2012/11/01 13:15:32 5846 5846 SHIFTDAT 3.4 2012/11/01 13:18:47 5846 5846 DELETE 6.3 2012/11/01 13:42:03 5846 1439 CTDEDIT 4.61 2012/11/01 16:16:04 1439 1304 CALIB 11.7 2012/11/01 17:12:49 1304 1304 FILTERS 4.3 2012/11/01 17:14:53 1304 1304 BINAVE 4.1.1 2012/11/01 17:15:52 1304 48 REMOVECH 8.1.1 2012/11/01 17:16:34 48 48 CHGUNITS 3.0 2012/11/01 17:17:58 48 48 MERGEHDR 1.1 2012/11/01 17:26:28 48 48 REORDER 1.3 2012/11/01 17:27:57 ? ? HDREDIT2 2.5.1 2012/11/01 17:34:25 ? ? CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:38:27 48 48 $END $REMARKS -CLEAN functions: 2012/10/25 14:42:58 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:Wetlabs:ECO-AFL # of Records to Advance (-ve for Delay): At REC# 0 Shift= 12.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 40.46 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT 2012/11/01 16:16:04 135 records were deleted in this editing session. 3 changes in channel Salinity:T0:C0 -CALIB parameters: 2012/11/01 17:12:49 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2012-49\Processing\doc\2012-49-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 14 Oxygen:Dissolved:SBE mL/L 10 0.4800000E-01 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:Wetlabs:ECO-AFL Fluorescence:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2012/11/01 17:16:34 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] pH:SBE [pH Units] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2012/11/01 17:34:25 Applied edit header: P:\Cruise_Data_Processing\2012-49\Processing\doc\2012-49-HDR.TXT Channel 1: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: Salinity:Practical:T0:C0 [PSS-78] Name: Salinity:T0:C0 ==> Salinity:Practical:T0:C0 $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2012-03A\2012-03A-0040hex.hex Software Version Seasave V 7.21d Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jul 04 2012 14:02:08 NMEA Latitude = 48 43.62 N NMEA Longitude = 123 32.91 W NMEA UTC (Time) = Jul 04 2012 14:04:06 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2012-03 Station: Depth(m): System UTC = Jul 04 2012 13:02:08 # nquan = 15 # nvalues = 5846 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity, Practical [PSU] # name 12 = sal11: Salinity, Practical, 2 [PSU] # name 13 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 14 = flag: flag # span 0 = 1, 5846 # span 1 = 1.513, 50.461 # span 2 = 9.4265, 11.5132 # span 3 = 9.4260, 11.4167 # span 4 = -0.266046, 3.253449 # span 5 = -0.071054, 3.253509 # span 6 = -0.5551, 64.4449 # span 7 = 1.7998, 2.5592 # span 8 = 4.856, 8.995 # span 9 = -1.360, 1.104 # span 10 = 0, 1 # span 11 = 0.0000, 29.8291 # span 12 = 0.0000, 29.8299 # span 13 = 3.90578, 7.32549 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Jul 04 2012 14:04:06 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 63507 # 12-Apr-11 # -4.435468e+004 # -1.845750e-001 # 1.192740e-002 # 3.979900e-002 # 0.000000e+000 # 2.993572e+001 # -3.336200e-004 # 3.759160e-006 # 1.565300e-009 # 0.99986626 # 5.62145 # 0.000000e+000 # 1.283280e-002 # -9.295010e+000 # # # # # # 2710 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.36717391e-003 # 6.46683268e-004 # 2.34981097e-005 # 2.22352352e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2128 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.01926507e+001 # 1.46093888e+000 # -2.51557628e-003 # 2.74924248e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # 0692 # Dec 2010 # 4.6518 # 2.5397 # # # # # # # # # # # # # # # 0997 # 23-Apr-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.8010e-001 # -0.4816 # 1.4264e-003 # 2.8936e-005 # -9.0212e-007 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 1.5600 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2216 # June 2012 # 1.30000000e+001 # # 0.0427 # # # # datcnv_date = Oct 24 2012 16:49:14, 7.21d [datcnv_vars = 11] # datcnv_in = P:\Cruise_Data_Processing\2012-49\RAW\CTD\2012-49-0040.hex P:\Crui se_Data_Processing\2012-49\Processing\doc\2012-49-ctd-new.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = Oct 25 2012 07:36:22, 7.21d # wildedit_in = P:\Cruise_Data_Processing\2012-49\Processing\convert\2012-49-004 0.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Oct 25 2012 11:24:47, 7.21d # alignctd_in = P:\Cruise_Data_Processing\2012-49\Processing\wildedit\2012-49-00 40.cnv # alignctd_adv = sbeox0V 4.000 # celltm_date = Oct 25 2012 12:57:15, 7.21d # celltm_in = P:\Cruise_Data_Processing\2012-49\Processing\align\2012-49-0040.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 9.0000, 9.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Oct 25 2012 13:00:33, 7.21d [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2012-49\Processing\celltm\2012-49-0040.c nv P:\Cruise_Data_Processing\2012-57\Processing\doc\2012-57-ctd-new.xmlcon # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = yes # file_type = ascii END* CTDEDIT was used to remove records near the surface and bottom of the cast; salinity was cleaned lightly. Data Processing Notes: ---------------------------------------------------------------------- Fluorescence data are nominal and unedited, except that some records were removed in editing temperature and salinity. There was no calibration sampling for dissolved oxygen, but the results of cruise 2012-01 were used to derive DO concentration. A small correction was later added based on negative DO values found in the anoxic layer of Saanich Inlet. There was no calibration sampling for salinity, but the results of cruise 2012-01 in February 2012 suggest calibration drift is <0.001. The SBE pH sensor data has been removed from this file since there was no field calibration information available and there are concerns about how the sensor performs. For details on processing see processing report: 2012-49-proc.doc. ---------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.48E-01 1) $END !--1--- ---2---- ---3--- ---4---- --5--- --6-- -7-- !Pressu Temperat Fluores Salinity Oxygen Oxyge Numb !re ure: cence: :T0:C0 : n: er_o ! Primary URU: Dissol Disso ~bin ! Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- -------- ------ ----- ---- *END OF HEADER 3.4 10.7755 5.724 28.2225 5.49 240.0 15 4.0 10.8069 6.281 28.5178 5.22 228.1 43 5.0 10.6643 5.374 28.8139 5.08 221.8 41 6.0 10.5696 4.118 28.8771 5.05 220.4 32 7.0 10.5440 3.699 28.8992 4.99 217.9 30 8.0 10.5274 3.450 28.9081 4.89 213.7 29 9.0 10.4833 3.323 28.9286 4.84 211.5 21 10.0 10.3865 2.945 28.9591 4.80 209.6 26 11.0 10.3945 2.980 28.9549 4.77 208.2 27 12.0 10.3154 2.541 29.0153 4.69 204.8 26 13.0 10.3065 2.467 29.0451 4.56 199.3 26 14.0 10.2700 2.567 29.0841 4.50 196.5 26 15.0 10.0937 1.572 29.1679 4.45 194.4 25 16.0 10.0825 1.606 29.1776 4.37 191.0 26 17.0 10.0419 1.488 29.2253 4.32 188.5 22 18.0 9.9367 1.213 29.2365 4.29 187.3 27 19.0 9.9038 1.151 29.2631 4.27 186.4 26 20.0 9.8582 1.098 29.3050 4.26 186.0 27 21.0 9.8285 1.071 29.3328 4.25 185.7 26 22.0 9.8210 0.965 29.3417 4.25 185.6 26 23.0 9.8134 0.890 29.3485 4.23 184.8 25 24.0 9.8018 0.965 29.3621 4.21 183.8 25 25.0 9.7903 0.988 29.3739 4.18 182.7 27 26.0 9.7674 0.871 29.3935 4.17 182.1 26 27.0 9.7419 0.901 29.4168 4.16 181.4 27 28.0 9.7237 0.919 29.4333 4.14 180.9 27 29.0 9.6913 0.830 29.4579 4.11 179.6 25 30.0 9.6855 0.831 29.4621 4.08 178.3 25 31.0 9.6736 0.819 29.4702 4.08 178.1 26 32.0 9.6019 0.698 29.5423 4.09 178.7 22 33.0 9.5973 0.689 29.5667 4.10 178.8 25 34.0 9.6003 0.695 29.5677 4.10 178.8 25 35.0 9.6008 0.635 29.5706 4.09 178.6 25 36.0 9.5982 0.638 29.5809 4.08 178.2 22 37.0 9.5851 0.671 29.6008 4.09 178.4 26 38.0 9.5832 0.635 29.6031 4.08 178.3 25 39.0 9.5821 0.661 29.6052 4.07 177.6 26 40.0 9.5803 0.652 29.6098 4.06 177.2 25 41.0 9.5696 0.637 29.6331 4.03 175.9 25 42.0 9.5482 0.611 29.6538 4.00 174.5 26 43.0 9.5226 0.596 29.6857 3.98 173.7 25 44.0 9.4893 0.575 29.7300 3.97 173.2 25 45.0 9.4670 0.570 29.7615 3.96 172.8 25 46.0 9.4500 0.593 29.7798 3.96 172.8 20 47.0 9.4383 0.547 29.7834 3.97 173.2 25 48.0 9.4354 0.561 29.7870 3.97 173.3 27 49.0 9.4359 0.536 29.7998 3.96 173.0 38 49.9 9.4320 0.518 29.8202 3.97 173.1 44