*2013/12/16 15:38:27.70 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2012/07/03 23:04:37.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 76 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 94978C92 NUMBER OF CHANNELS : 7 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 4.411 78.742 2 Temperature:Primary 'deg C (ITS90)' 8.9451 10.1144 3 Fluorescence:URU:Wetlabs mg/m^3 0.441 0.577 4 Salinity:T0:C0 PSS-78 29.1101 30.8393 5 Oxygen:Dissolved:SBE mL/L 3.583 4.478 6 Oxygen:Dissolved:SBE umol/kg 156.2297 195.5365 7 Number_of_bin_records n/a 8 37 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 6 F ' ' 1 7 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2012-49\Pro $END *ADMINISTRATION MISSION : 2012-49 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : Strait of Georgia Juvenile Salmon Survey SCIENTIST : Neville C. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Strait of Georgia / Juan de Fuca Strait STATION : 128 EVENT NUMBER : 39 LATITUDE : 48 45.27000 N ! (deg min) LONGITUDE : 123 8.59000 W ! (deg min) WATER DEPTH : 95 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0443 $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.1.2 2012/10/25 14:39:49 9944 9944 CLEAN 5.0.4 2012/10/25 14:45:43 9944 9944 MERGEHDR 1.1 2012/10/25 15:29:07 9944 9944 SHIFTDAT 3.4 2012/10/25 15:47:32 9944 9944 SHIFTDAT 3.4 2012/11/01 13:15:29 9944 9944 SHIFTDAT 3.4 2012/11/01 13:18:44 9944 9944 REVERSE 2.0 2012/11/01 13:42:07 9944 9944 DELETE 6.3 2012/11/01 13:42:58 9944 2811 CTDEDIT 4.61 2012/11/01 16:13:59 2811 2361 CALIB 11.7 2012/11/01 17:12:48 2361 2361 FILTERS 4.3 2012/11/01 17:14:52 2361 2361 BINAVE 4.1.1 2012/11/01 17:15:52 2361 76 REMOVECH 8.1.1 2012/11/01 17:16:34 76 76 CHGUNITS 3.0 2012/11/01 17:17:58 76 76 MERGEHDR 1.1 2012/11/01 17:26:28 76 76 REORDER 1.3 2012/11/01 17:27:57 ? ? HDREDIT2 2.5.1 2012/11/01 17:34:25 ? ? CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:38:27 76 76 $END $REMARKS -CLEAN functions: 2012/10/25 14:42:58 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:Wetlabs:ECO-AFL # of Records to Advance (-ve for Delay): At REC# 0 Shift= 12.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 69.98 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT 2012/11/01 16:13:59 450 records were deleted in this editing session. No data values were changed. -CALIB parameters: 2012/11/01 17:12:48 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2012-49\Processing\doc\2012-49-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 14 Oxygen:Dissolved:SBE mL/L 10 0.4800000E-01 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:Wetlabs:ECO-AFL Fluorescence:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2012/11/01 17:16:34 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] pH:SBE [pH Units] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2012/11/01 17:34:25 Applied edit header: P:\Cruise_Data_Processing\2012-49\Processing\doc\2012-49-HDR.TXT Channel 1: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: Salinity:Practical:T0:C0 [PSS-78] Name: Salinity:T0:C0 ==> Salinity:Practical:T0:C0 $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2012-03A\2012-03A-0039hex.hex Software Version Seasave V 7.21d Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jul 03 2012 23:02:40 NMEA Latitude = 48 45.27 N NMEA Longitude = 123 08.59 W NMEA UTC (Time) = Jul 03 2012 23:04:37 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2012-03 Station: Depth(m): System UTC = Jul 03 2012 22:02:40 # nquan = 15 # nvalues = 9944 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity, Practical [PSU] # name 12 = sal11: Salinity, Practical, 2 [PSU] # name 13 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 14 = flag: flag # span 0 = 1, 9944 # span 1 = 1.575, 79.976 # span 2 = 8.8809, 15.4855 # span 3 = 8.8940, 15.2135 # span 4 = -0.321508, 3.415330 # span 5 = -0.510974, 3.416781 # span 6 = -0.5551, 64.4449 # span 7 = 1.2576, 2.5226 # span 8 = 4.783, 8.835 # span 9 = -1.271, 1.979 # span 10 = 0, 1 # span 11 = 0.0000, 30.9316 # span 12 = 0.0000, 30.9288 # span 13 = 2.26270, 6.58431 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Jul 03 2012 23:04:37 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 63507 # 12-Apr-11 # -4.435468e+004 # -1.845750e-001 # 1.192740e-002 # 3.979900e-002 # 0.000000e+000 # 2.993572e+001 # -3.336200e-004 # 3.759160e-006 # 1.565300e-009 # 0.99986626 # 5.62145 # 0.000000e+000 # 1.283280e-002 # -9.295010e+000 # # # # # # 2710 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.36717391e-003 # 6.46683268e-004 # 2.34981097e-005 # 2.22352352e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2128 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.01926507e+001 # 1.46093888e+000 # -2.51557628e-003 # 2.74924248e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # 0692 # Dec 2010 # 4.6518 # 2.5397 # # # # # # # # # # # # # # # 0997 # 23-Apr-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.8010e-001 # -0.4816 # 1.4264e-003 # 2.8936e-005 # -9.0212e-007 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 1.5600 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2216 # June 2012 # 1.30000000e+001 # # 0.0427 # # # # datcnv_date = Oct 24 2012 16:49:13, 7.21d [datcnv_vars = 11] # datcnv_in = P:\Cruise_Data_Processing\2012-49\RAW\CTD\2012-49-0039.hex P:\Crui se_Data_Processing\2012-49\Processing\doc\2012-49-ctd-new.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = Oct 25 2012 07:36:21, 7.21d # wildedit_in = P:\Cruise_Data_Processing\2012-49\Processing\convert\2012-49-003 9.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Oct 25 2012 11:24:46, 7.21d # alignctd_in = P:\Cruise_Data_Processing\2012-49\Processing\wildedit\2012-49-00 39.cnv # alignctd_adv = sbeox0V 4.000 # celltm_date = Oct 25 2012 12:57:14, 7.21d # celltm_in = P:\Cruise_Data_Processing\2012-49\Processing\align\2012-49-0039.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 9.0000, 9.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Oct 25 2012 13:00:32, 7.21d [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2012-49\Processing\celltm\2012-49-0039.c nv P:\Cruise_Data_Processing\2012-57\Processing\doc\2012-57-ctd-new.xmlcon # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = yes # file_type = ascii END* CTDEDIT was used to remove records near the surface and bottom of the cast; salinity was cleaned lightly. ------------------------------------------------------------------------ ------------------------------------------------------------------- This file contains data from the upcast because the pumps were not on for the downcast. The quality of the data are considered lower than for other casts. ------------------------------------------------------------------------ ------------------------------------------------------------------- Data Processing Notes: ---------------------------------------------------------------------- Fluorescence data are nominal and unedited, except that some records were removed in editing temperature and salinity. There was no calibration sampling for dissolved oxygen, but the results of cruise 2012-01 were used to derive DO concentration. A small correction was later added based on negative DO values found in the anoxic layer of Saanich Inlet. There was no calibration sampling for salinity, but the results of cruise 2012-01 in February 2012 suggest calibration drift is <0.001. The SBE pH sensor data has been removed from this file since there was no field calibration information available and there are concerns about how the sensor performs. For details on processing see processing report: 2012-49-proc.doc. ---------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.48E-01 1) $END !--1--- ---2---- ---3--- ---4---- --5--- --6-- -7-- !Pressu Temperat Fluores Salinity Oxygen Oxyge Numb !re ure: cence: :T0:C0 : n: er_o ! Primary URU: Dissol Disso ~bin ! Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- -------- ------ ----- ---- *END OF HEADER 4.4 10.1144 0.441 29.1101 4.45 194.1 8 4.9 10.1141 0.463 29.1112 4.45 194.4 36 6.0 10.0673 0.504 29.1404 4.48 195.5 15 7.1 10.0044 0.509 29.1772 4.47 195.3 30 7.9 9.9536 0.509 29.2144 4.45 194.4 32 9.2 9.8904 0.560 29.2633 4.42 192.8 22 10.0 9.6891 0.577 29.4777 4.39 191.7 32 11.0 9.5337 0.540 29.6537 4.32 188.5 37 12.0 9.4561 0.522 29.7842 4.19 182.8 36 13.0 9.4390 0.542 29.8170 4.08 177.9 35 14.0 9.4297 0.514 29.8359 4.03 175.9 32 15.0 9.4200 0.530 29.8541 4.02 175.2 30 16.0 9.4059 0.523 29.8831 4.01 175.0 29 17.0 9.3733 0.504 29.9474 4.00 174.6 22 18.1 9.3644 0.500 29.9666 3.98 173.8 25 19.0 9.3631 0.497 29.9715 3.97 173.1 30 20.0 9.3627 0.499 29.9753 3.95 172.5 27 21.0 9.3628 0.518 29.9761 3.95 172.4 30 22.0 9.3622 0.501 29.9784 3.96 172.7 31 23.0 9.3619 0.528 29.9796 3.96 172.7 30 24.0 9.3620 0.521 29.9798 3.95 172.6 30 25.0 9.3616 0.535 29.9805 3.96 172.7 31 26.0 9.3614 0.511 29.9814 3.96 172.8 30 27.0 9.3609 0.507 29.9826 3.96 172.6 30 28.0 9.3603 0.538 29.9855 3.95 172.6 30 29.0 9.3606 0.513 29.9866 3.95 172.5 31 30.0 9.3615 0.516 29.9881 3.96 172.6 30 31.0 9.3623 0.501 29.9898 3.95 172.5 32 32.0 9.3627 0.527 29.9885 3.95 172.4 32 33.0 9.3620 0.515 29.9909 3.95 172.3 32 34.0 9.3593 0.503 30.0009 3.95 172.3 32 35.0 9.3551 0.525 30.0158 3.95 172.3 32 36.0 9.3501 0.518 30.0353 3.95 172.2 32 37.0 9.3527 0.540 30.0316 3.93 171.6 32 38.0 9.3543 0.516 30.0280 3.93 171.6 32 39.0 9.3543 0.534 30.0282 3.94 171.8 33 40.0 9.3542 0.507 30.0276 3.94 171.9 32 41.0 9.3517 0.523 30.0325 3.94 172.0 33 42.0 9.3436 0.536 30.0496 3.95 172.2 34 43.0 9.3373 0.519 30.0622 3.93 171.7 35 44.0 9.3333 0.509 30.0707 3.93 171.5 32 45.0 9.3241 0.506 30.0894 3.92 171.0 34 46.0 9.3147 0.502 30.1091 3.92 171.1 35 47.0 9.2842 0.499 30.1720 3.92 170.8 36 48.0 9.2775 0.540 30.1865 3.89 169.7 35 49.0 9.2899 0.516 30.1607 3.87 168.8 36 50.0 9.2893 0.484 30.1616 3.88 169.1 36 51.0 9.2827 0.520 30.1743 3.88 169.4 35 52.0 9.2561 0.526 30.2277 3.88 169.3 36 53.0 9.2179 0.515 30.3083 3.87 168.7 36 54.0 9.2156 0.510 30.3138 3.83 167.2 34 55.0 9.2254 0.507 30.2924 3.81 166.3 35 56.0 9.1970 0.504 30.3516 3.82 166.5 36 57.0 9.1858 0.491 30.3758 3.81 166.2 34 58.0 9.1843 0.496 30.3794 3.79 165.5 32 59.0 9.1812 0.507 30.3864 3.79 165.1 32 60.0 9.1804 0.502 30.3877 3.78 165.1 32 61.0 9.1816 0.503 30.3853 3.78 165.0 30 62.0 9.1758 0.498 30.3977 3.79 165.1 30 63.0 9.1730 0.510 30.4042 3.78 165.1 30 64.0 9.1678 0.544 30.4153 3.77 164.6 30 65.0 9.1604 0.514 30.4307 3.77 164.5 31 66.0 9.1495 0.507 30.4505 3.77 164.5 30 67.0 9.1284 0.509 30.4937 3.76 164.0 30 68.0 9.1152 0.512 30.5193 3.75 163.5 29 69.0 9.1005 0.494 30.5470 3.74 163.0 29 70.0 9.0858 0.526 30.5749 3.72 162.2 30 71.0 9.0666 0.493 30.6100 3.71 161.8 30 72.0 9.0585 0.496 30.6255 3.70 161.2 29 73.0 9.0295 0.492 30.6775 3.68 160.6 27 74.0 8.9866 0.508 30.7610 3.67 160.2 28 75.0 8.9695 0.491 30.7936 3.64 158.9 28 76.0 8.9637 0.476 30.8046 3.61 157.5 27 77.0 8.9603 0.508 30.8108 3.59 156.5 31 78.0 8.9594 0.515 30.8127 3.58 156.2 35 78.7 8.9451 0.509 30.8393 3.58 156.3 20