*2013/12/16 15:38:27.67 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2012/07/03 17:52:22.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 94 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 523A052B NUMBER OF CHANNELS : 7 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 3.344 96.699 2 Temperature:Primary 'deg C (ITS90)' 8.8874 10.9458 3 Fluorescence:URU:Wetlabs mg/m^3 0.417 1.14 4 Salinity:T0:C0 PSS-78 27.9102 30.8431 5 Oxygen:Dissolved:SBE mL/L 3.521 4.792 6 Oxygen:Dissolved:SBE umol/kg 153.5211 209.4729 7 Number_of_bin_records n/a 9 41 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 6 F ' ' 1 7 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2012-49\Pro $END *ADMINISTRATION MISSION : 2012-49 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : Strait of Georgia Juvenile Salmon Survey SCIENTIST : Neville C. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Strait of Georgia / Juan de Fuca Strait STATION : 124 EVENT NUMBER : 38 LATITUDE : 48 49.36000 N ! (deg min) LONGITUDE : 123 20.56000 W ! (deg min) WATER DEPTH : 105 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0443 $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.1.2 2012/10/25 14:39:47 8019 8019 CLEAN 5.0.4 2012/10/25 14:45:40 8019 8019 MERGEHDR 1.1 2012/10/25 15:29:05 8019 8019 SHIFTDAT 3.4 2012/10/25 15:47:30 8019 8019 SHIFTDAT 3.4 2012/11/01 13:15:26 8019 8019 SHIFTDAT 3.4 2012/11/01 13:18:41 8019 8019 DELETE 6.3 2012/11/01 13:41:58 8019 3339 CTDEDIT 4.61 2012/11/01 16:09:01 3339 3098 CALIB 11.7 2012/11/01 17:12:47 3098 3098 FILTERS 4.3 2012/11/01 17:14:51 3098 3098 BINAVE 4.1.1 2012/11/01 17:15:51 3098 94 REMOVECH 8.1.1 2012/11/01 17:16:34 94 94 CHGUNITS 3.0 2012/11/01 17:17:58 94 94 MERGEHDR 1.1 2012/11/01 17:26:27 94 94 REORDER 1.3 2012/11/01 17:27:57 ? ? HDREDIT2 2.5.1 2012/11/01 17:34:25 ? ? CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:38:27 94 94 $END $REMARKS -CLEAN functions: 2012/10/25 14:42:58 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:Wetlabs:ECO-AFL # of Records to Advance (-ve for Delay): At REC# 0 Shift= 12.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 87.19 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT 2012/11/01 16:09:01 241 records were deleted in this editing session. 18 changes in channel Salinity:T0:C0 -CALIB parameters: 2012/11/01 17:12:47 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2012-49\Processing\doc\2012-49-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 14 Oxygen:Dissolved:SBE mL/L 10 0.4800000E-01 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:Wetlabs:ECO-AFL Fluorescence:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2012/11/01 17:16:34 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] pH:SBE [pH Units] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2012/11/01 17:34:25 Applied edit header: P:\Cruise_Data_Processing\2012-49\Processing\doc\2012-49-HDR.TXT Channel 1: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: Salinity:Practical:T0:C0 [PSS-78] Name: Salinity:T0:C0 ==> Salinity:Practical:T0:C0 $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2012-03A\2012-03A-0038hex.hex Software Version Seasave V 7.21d Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jul 03 2012 17:50:25 NMEA Latitude = 48 49.36 N NMEA Longitude = 123 20.56 W NMEA UTC (Time) = Jul 03 2012 17:52:22 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2012-03 Station: Depth(m): System UTC = Jul 03 2012 16:50:25 # nquan = 15 # nvalues = 8019 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity, Practical [PSU] # name 12 = sal11: Salinity, Practical, 2 [PSU] # name 13 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 14 = flag: flag # span 0 = 1, 8019 # span 1 = 1.899, 97.195 # span 2 = 8.8816, 11.1850 # span 3 = 8.8810, 11.0242 # span 4 = 3.088520, 3.310214 # span 5 = 3.120282, 3.310285 # span 6 = -0.5551, 32.0639 # span 7 = 1.6398, 2.4921 # span 8 = 4.924, 8.909 # span 9 = -1.161, 1.458 # span 10 = 0, 1 # span 11 = 26.9768, 30.8538 # span 12 = 27.2878, 30.8552 # span 13 = 3.46094, 5.84597 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Jul 03 2012 17:52:22 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 63507 # 12-Apr-11 # -4.435468e+004 # -1.845750e-001 # 1.192740e-002 # 3.979900e-002 # 0.000000e+000 # 2.993572e+001 # -3.336200e-004 # 3.759160e-006 # 1.565300e-009 # 0.99986626 # 5.62145 # 0.000000e+000 # 1.283280e-002 # -9.295010e+000 # # # # # # 2710 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.36717391e-003 # 6.46683268e-004 # 2.34981097e-005 # 2.22352352e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2128 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.01926507e+001 # 1.46093888e+000 # -2.51557628e-003 # 2.74924248e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # 0692 # Dec 2010 # 4.6518 # 2.5397 # # # # # # # # # # # # # # # 0997 # 23-Apr-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.8010e-001 # -0.4816 # 1.4264e-003 # 2.8936e-005 # -9.0212e-007 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 1.5600 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2216 # June 2012 # 1.30000000e+001 # # 0.0427 # # # # datcnv_date = Oct 24 2012 16:49:11, 7.21d [datcnv_vars = 11] # datcnv_in = P:\Cruise_Data_Processing\2012-49\RAW\CTD\2012-49-0038.hex P:\Crui se_Data_Processing\2012-49\Processing\doc\2012-49-ctd-new.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = Oct 25 2012 07:36:21, 7.21d # wildedit_in = P:\Cruise_Data_Processing\2012-49\Processing\convert\2012-49-003 8.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Oct 25 2012 11:24:45, 7.21d # alignctd_in = P:\Cruise_Data_Processing\2012-49\Processing\wildedit\2012-49-00 38.cnv # alignctd_adv = sbeox0V 4.000 # celltm_date = Oct 25 2012 12:57:13, 7.21d # celltm_in = P:\Cruise_Data_Processing\2012-49\Processing\align\2012-49-0038.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 9.0000, 9.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Oct 25 2012 13:00:30, 7.21d [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2012-49\Processing\celltm\2012-49-0038.c nv P:\Cruise_Data_Processing\2012-57\Processing\doc\2012-57-ctd-new.xmlcon # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = yes # file_type = ascii END* CTDEDIT was used to remove records near the surface and bottom of the cast; salinity was cleaned lightly. Data Processing Notes: ---------------------------------------------------------------------- Fluorescence data are nominal and unedited, except that some records were removed in editing temperature and salinity. There was no calibration sampling for dissolved oxygen, but the results of cruise 2012-01 were used to derive DO concentration. A small correction was later added based on negative DO values found in the anoxic layer of Saanich Inlet. There was no calibration sampling for salinity, but the results of cruise 2012-01 in February 2012 suggest calibration drift is <0.001. The SBE pH sensor data has been removed from this file since there was no field calibration information available and there are concerns about how the sensor performs. For details on processing see processing report: 2012-49-proc.doc. ---------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.48E-01 1) $END !--1--- ---2---- ---3--- ---4---- --5--- --6-- -7-- !Pressu Temperat Fluores Salinity Oxygen Oxyge Numb !re ure: cence: :T0:C0 : n: er_o ! Primary URU: Dissol Disso ~bin ! Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- -------- ------ ----- ---- *END OF HEADER 3.3 10.9458 1.140 27.9102 4.79 209.5 9 4.0 10.8757 1.037 27.9995 4.74 207.3 35 5.0 10.6774 0.988 28.2606 4.70 205.5 33 6.0 10.5583 0.990 28.3816 4.67 204.1 32 7.0 10.4975 1.054 28.4471 4.63 202.4 32 8.0 10.4151 1.009 28.4672 4.60 201.0 30 9.0 10.3069 0.873 28.5300 4.58 200.0 33 10.0 10.2481 0.803 28.5844 4.56 199.1 31 11.0 10.2095 0.809 28.6474 4.55 198.8 31 12.0 10.1836 0.788 28.7029 4.54 198.2 31 13.0 10.1846 0.805 28.7202 4.50 196.7 31 14.0 10.1801 0.835 28.7366 4.46 194.7 32 15.0 10.1241 0.758 28.8175 4.42 193.2 32 16.0 10.0747 0.766 28.9010 4.40 192.1 32 17.0 10.0283 0.769 28.9759 4.39 191.7 35 18.0 9.9964 0.748 29.0169 4.38 191.4 36 19.0 9.9847 0.722 29.0260 4.36 190.5 33 20.0 9.9598 0.727 29.0580 4.35 189.8 35 21.0 9.9356 0.731 29.1119 4.34 189.5 38 22.0 9.9278 0.770 29.1383 4.33 189.2 38 23.0 9.9305 0.736 29.1357 4.32 188.6 37 24.0 9.9213 0.736 29.1550 4.30 187.6 34 25.0 9.8951 0.721 29.2084 4.27 186.5 33 26.0 9.8547 0.723 29.2599 4.26 186.1 31 27.0 9.8393 0.706 29.2761 4.25 185.5 28 28.0 9.8299 0.671 29.2896 4.24 184.9 26 29.0 9.8326 0.684 29.2914 4.23 184.6 27 30.0 9.7925 0.677 29.3385 4.23 184.8 29 31.0 9.7682 0.636 29.3532 4.22 184.5 30 32.0 9.7638 0.626 29.3549 4.22 184.1 30 33.0 9.7593 0.652 29.3605 4.22 184.2 29 34.0 9.7453 0.634 29.3725 4.21 183.9 30 35.0 9.7444 0.629 29.3736 4.22 184.1 31 36.0 9.7415 0.621 29.3775 4.21 183.9 33 37.0 9.7386 0.612 29.3804 4.20 183.5 31 38.0 9.7364 0.639 29.3835 4.19 182.8 30 39.0 9.7256 0.620 29.3972 4.19 182.8 31 40.0 9.7087 0.624 29.4200 4.18 182.6 34 41.0 9.7019 0.624 29.4302 4.17 182.2 37 42.0 9.6911 0.622 29.4468 4.17 182.0 36 43.0 9.6820 0.642 29.4638 4.16 181.6 31 44.0 9.6767 0.631 29.4721 4.16 181.6 31 45.0 9.6695 0.606 29.4855 4.15 181.2 29 46.0 9.6695 0.620 29.4864 4.14 180.7 33 47.0 9.6600 0.613 29.5028 4.12 179.9 32 48.0 9.6393 0.633 29.5394 4.11 179.2 35 49.0 9.6130 0.609 29.5847 4.11 179.2 38 50.0 9.5953 0.610 29.6157 4.11 179.2 40 51.0 9.6012 0.618 29.6060 4.08 178.1 36 52.0 9.6021 0.621 29.6054 4.05 176.6 34 53.0 9.5664 0.620 29.6700 4.02 175.6 36 54.0 9.5250 0.613 29.7431 4.02 175.3 37 55.0 9.5117 0.609 29.7677 4.01 175.2 37 56.0 9.5113 0.623 29.7687 4.00 174.5 39 57.0 9.4937 0.623 29.7996 3.94 171.9 38 58.0 9.4718 0.624 29.8357 3.73 162.8 36 59.0 9.3713 0.601 30.0058 3.58 156.0 35 60.0 8.9797 0.577 30.6762 3.57 155.9 35 61.0 8.9477 0.496 30.7253 3.58 156.2 35 62.0 8.9468 0.452 30.7276 3.59 156.5 37 63.0 8.9464 0.433 30.7298 3.59 156.6 41 64.0 8.9464 0.443 30.7306 3.59 156.7 41 65.0 8.9470 0.456 30.7305 3.59 156.6 40 66.0 8.9456 0.467 30.7341 3.59 156.6 36 67.0 8.9468 0.457 30.7326 3.58 156.2 33 68.0 8.9441 0.438 30.7384 3.58 156.2 32 69.0 8.9365 0.435 30.7534 3.59 156.4 34 70.0 8.9438 0.436 30.7403 3.58 156.2 33 71.0 8.9478 0.429 30.7333 3.59 156.3 35 72.0 8.9435 0.451 30.7415 3.57 155.7 36 73.0 8.9396 0.444 30.7494 3.55 154.9 37 74.0 8.9146 0.438 30.7928 3.55 154.8 34 75.0 8.9107 0.422 30.7990 3.55 154.8 34 76.0 8.9073 0.443 30.8056 3.56 155.0 32 77.0 8.9072 0.453 30.8063 3.55 154.8 29 78.0 8.9070 0.450 30.8068 3.55 154.7 31 79.0 8.9071 0.454 30.8069 3.55 154.7 31 80.0 8.9066 0.437 30.8079 3.54 154.5 32 81.0 8.9063 0.437 30.8092 3.55 154.9 30 82.0 8.9079 0.433 30.8067 3.55 154.9 29 83.0 8.9084 0.451 30.8062 3.55 154.8 32 84.0 8.9065 0.431 30.8098 3.54 154.5 33 85.0 8.9048 0.436 30.8132 3.54 154.5 30 86.0 8.9044 0.452 30.8141 3.55 154.6 30 87.0 8.9027 0.458 30.8167 3.55 154.6 30 88.0 8.9018 0.430 30.8173 3.54 154.4 33 89.0 8.9011 0.446 30.8188 3.53 154.0 34 90.0 8.8993 0.417 30.8220 3.53 154.0 31 91.0 8.8993 0.443 30.8218 3.54 154.2 29 92.0 8.8984 0.443 30.8235 3.54 154.4 31 92.8 8.8993 0.453 30.8220 3.55 154.6 18 95.1 8.8984 0.425 30.8236 3.53 153.9 29 96.1 8.8944 0.425 30.8306 3.53 153.7 38 96.7 8.8874 0.443 30.8431 3.52 153.5 28