*2013/12/16 15:38:27.57 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2012/07/02 17:52:16.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 100 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : E7C54743 NUMBER OF CHANNELS : 7 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 3.347 101.982 2 Temperature:Primary 'deg C (ITS90)' 8.2481 15.7564 3 Fluorescence:URU:Wetlabs mg/m^3 0.117 3.319 4 Salinity:T0:C0 PSS-78 14.517 30.2542 5 Oxygen:Dissolved:SBE mL/L 4.18 6.716 6 Oxygen:Dissolved:SBE umol/kg 182.3226 296.6536 7 Number_of_bin_records n/a 16 55 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 6 F ' ' 1 7 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2012-49\Pro $END *ADMINISTRATION MISSION : 2012-49 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : Strait of Georgia Juvenile Salmon Survey SCIENTIST : Neville C. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Strait of Georgia / Juan de Fuca Strait STATION : 118 EVENT NUMBER : 36 LATITUDE : 49 24.45000 N ! (deg min) LONGITUDE : 123 46.37000 W ! (deg min) WATER DEPTH : 119 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0443 $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.1.2 2012/10/25 14:39:38 7790 7790 CLEAN 5.0.4 2012/10/25 14:45:31 7790 7790 MERGEHDR 1.1 2012/10/25 15:28:56 7790 7790 SHIFTDAT 3.4 2012/10/25 15:47:21 7790 7790 SHIFTDAT 3.4 2012/11/01 13:15:17 7790 7790 SHIFTDAT 3.4 2012/11/01 13:18:32 7790 7790 DELETE 6.3 2012/11/01 13:41:51 7790 2865 CTDEDIT 4.61 2012/11/01 15:56:17 2865 2641 CALIB 11.7 2012/11/01 17:12:44 2641 2641 FILTERS 4.3 2012/11/01 17:14:48 2641 2641 BINAVE 4.1.1 2012/11/01 17:15:49 2641 100 REMOVECH 8.1.1 2012/11/01 17:16:34 100 100 CHGUNITS 3.0 2012/11/01 17:17:58 100 100 MERGEHDR 1.1 2012/11/01 17:26:27 100 100 REORDER 1.3 2012/11/01 17:27:57 ? ? HDREDIT2 2.5.1 2012/11/01 17:34:25 ? ? CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:38:27 100 100 $END $REMARKS -CLEAN functions: 2012/10/25 14:42:58 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:Wetlabs:ECO-AFL # of Records to Advance (-ve for Delay): At REC# 0 Shift= 12.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 92.55 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT 2012/11/01 15:56:17 224 records were deleted in this editing session. 15 changes in channel Salinity:T0:C0 -CALIB parameters: 2012/11/01 17:12:44 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2012-49\Processing\doc\2012-49-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 14 Oxygen:Dissolved:SBE mL/L 10 0.4800000E-01 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:Wetlabs:ECO-AFL Fluorescence:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2012/11/01 17:16:34 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] pH:SBE [pH Units] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2012/11/01 17:34:25 Applied edit header: P:\Cruise_Data_Processing\2012-49\Processing\doc\2012-49-HDR.TXT Channel 1: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: Salinity:Practical:T0:C0 [PSS-78] Name: Salinity:T0:C0 ==> Salinity:Practical:T0:C0 $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2012-03A\2012-03A-0036hex.hex Software Version Seasave V 7.21d Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jul 02 2012 17:50:20 NMEA Latitude = 49 24.45 N NMEA Longitude = 123 46.37 W NMEA UTC (Time) = Jul 02 2012 17:52:16 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2012-03 Station: Depth(m): System UTC = Jul 02 2012 16:50:20 # nquan = 15 # nvalues = 7790 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity, Practical [PSU] # name 12 = sal11: Salinity, Practical, 2 [PSU] # name 13 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 14 = flag: flag # span 0 = 1, 7790 # span 1 = 1.458, 102.547 # span 2 = 8.2466, 16.1318 # span 3 = 8.2467, 16.1327 # span 4 = 0.009049, 3.207798 # span 5 = 0.004112, 3.207937 # span 6 = -0.1583, 59.7941 # span 7 = 1.8339, 2.7155 # span 8 = 4.756, 9.278 # span 9 = -1.330, 1.546 # span 10 = 0, 1 # span 11 = 0.0572, 30.2612 # span 12 = 0.0280, 30.2625 # span 13 = 4.12864, 7.23231 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Jul 02 2012 17:52:16 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 63507 # 12-Apr-11 # -4.435468e+004 # -1.845750e-001 # 1.192740e-002 # 3.979900e-002 # 0.000000e+000 # 2.993572e+001 # -3.336200e-004 # 3.759160e-006 # 1.565300e-009 # 0.99986626 # 5.62145 # 0.000000e+000 # 1.283280e-002 # -9.295010e+000 # # # # # # 2710 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.36717391e-003 # 6.46683268e-004 # 2.34981097e-005 # 2.22352352e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2128 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.01926507e+001 # 1.46093888e+000 # -2.51557628e-003 # 2.74924248e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # 0692 # Dec 2010 # 4.6518 # 2.5397 # # # # # # # # # # # # # # # 0997 # 23-Apr-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.8010e-001 # -0.4816 # 1.4264e-003 # 2.8936e-005 # -9.0212e-007 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 1.5600 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2216 # June 2012 # 1.30000000e+001 # # 0.0427 # # # # datcnv_date = Oct 24 2012 16:49:07, 7.21d [datcnv_vars = 11] # datcnv_in = P:\Cruise_Data_Processing\2012-49\RAW\CTD\2012-49-0036.hex P:\Crui se_Data_Processing\2012-49\Processing\doc\2012-49-ctd-new.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = Oct 25 2012 07:36:18, 7.21d # wildedit_in = P:\Cruise_Data_Processing\2012-49\Processing\convert\2012-49-003 6.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Oct 25 2012 11:24:43, 7.21d # alignctd_in = P:\Cruise_Data_Processing\2012-49\Processing\wildedit\2012-49-00 36.cnv # alignctd_adv = sbeox0V 4.000 # celltm_date = Oct 25 2012 12:57:11, 7.21d # celltm_in = P:\Cruise_Data_Processing\2012-49\Processing\align\2012-49-0036.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 9.0000, 9.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Oct 25 2012 13:00:28, 7.21d [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2012-49\Processing\celltm\2012-49-0036.c nv P:\Cruise_Data_Processing\2012-57\Processing\doc\2012-57-ctd-new.xmlcon # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = yes # file_type = ascii END* CTDEDIT was used to remove records near the surface and bottom of the cast; salinity was cleaned lightly. Data Processing Notes: ---------------------------------------------------------------------- Fluorescence data are nominal and unedited, except that some records were removed in editing temperature and salinity. There was no calibration sampling for dissolved oxygen, but the results of cruise 2012-01 were used to derive DO concentration. A small correction was later added based on negative DO values found in the anoxic layer of Saanich Inlet. There was no calibration sampling for salinity, but the results of cruise 2012-01 in February 2012 suggest calibration drift is <0.001. The SBE pH sensor data has been removed from this file since there was no field calibration information available and there are concerns about how the sensor performs. For details on processing see processing report: 2012-49-proc.doc. ---------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.48E-01 1) $END !--1--- ---2---- ---3--- ---4---- --5--- --6-- -7-- !Pressu Temperat Fluores Salinity Oxygen Oxyge Numb !re ure: cence: :T0:C0 : n: er_o ! Primary URU: Dissol Disso ~bin ! Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- -------- ------ ----- ---- *END OF HEADER 3.3 14.2155 3.319 14.5170 6.47 285.7 23 3.8 14.2129 3.280 14.5236 6.48 286.5 55 5.1 14.4962 2.726 14.9681 6.72 296.7 32 6.0 15.7564 2.283 17.0581 5.80 255.8 44 7.0 15.4517 2.330 18.4937 5.63 248.1 34 8.0 13.6072 1.862 21.9583 5.49 241.2 28 9.0 13.2967 1.626 23.6669 5.32 233.3 31 10.0 12.6710 1.373 24.7736 5.28 231.4 28 11.0 11.8251 1.663 25.7903 5.23 228.8 25 12.0 11.4985 1.815 26.3800 5.05 221.1 26 13.0 11.2834 1.735 26.6993 4.86 212.7 27 14.0 10.9446 1.468 27.1387 4.76 208.4 22 15.0 10.5061 1.052 27.4762 4.71 205.9 26 16.0 9.9893 0.639 27.8166 4.67 204.2 25 17.0 9.7709 0.460 27.9935 4.66 203.9 25 18.0 9.5279 0.385 28.2265 4.67 204.0 27 19.0 9.2909 0.333 28.4917 4.63 202.4 25 20.0 9.2115 0.275 28.6923 4.58 200.2 25 21.0 9.2681 0.290 28.8665 4.54 198.1 26 22.0 9.2492 0.297 28.9618 4.50 196.4 26 23.0 9.1128 0.318 29.0959 4.46 194.9 27 24.0 9.0552 0.260 29.1538 4.42 192.8 27 25.0 8.9969 0.284 29.2304 4.38 191.3 27 26.0 8.9368 0.244 29.3297 4.37 190.6 25 27.0 8.8820 0.216 29.3789 4.37 190.6 26 28.0 8.8506 0.206 29.4073 4.37 190.6 25 29.0 8.8118 0.191 29.4451 4.35 189.9 25 30.0 8.7801 0.198 29.4861 4.33 189.1 26 31.0 8.7716 0.204 29.4929 4.31 188.2 26 32.0 8.6968 0.185 29.5336 4.30 187.8 26 33.0 8.6297 0.188 29.5560 4.31 188.0 26 34.0 8.5689 0.185 29.5770 4.32 188.4 26 35.0 8.4904 0.175 29.6034 4.32 188.7 25 36.0 8.4674 0.163 29.6102 4.33 188.8 26 37.0 8.4499 0.194 29.6166 4.32 188.7 27 38.0 8.4284 0.169 29.6273 4.32 188.6 25 39.0 8.4207 0.163 29.6298 4.32 188.7 26 40.0 8.4125 0.159 29.6318 4.32 188.7 28 41.0 8.4022 0.139 29.6365 4.32 188.4 27 42.0 8.3916 0.145 29.6437 4.32 188.4 26 43.0 8.3879 0.154 29.6465 4.32 188.5 27 44.0 8.3804 0.152 29.6526 4.32 188.4 25 45.0 8.3688 0.164 29.6612 4.32 188.4 26 46.0 8.3655 0.158 29.6629 4.32 188.6 25 47.0 8.3576 0.150 29.6671 4.32 188.7 26 48.0 8.3563 0.149 29.6718 4.33 188.9 25 49.0 8.3520 0.132 29.6787 4.33 188.9 28 50.0 8.3486 0.178 29.6858 4.32 188.6 27 51.0 8.3445 0.145 29.6890 4.33 188.8 26 52.0 8.3364 0.147 29.7006 4.33 188.9 26 53.0 8.3291 0.145 29.7175 4.33 188.9 27 54.0 8.3212 0.144 29.7289 4.33 189.0 26 55.0 8.3164 0.151 29.7373 4.34 189.2 24 56.0 8.3145 0.163 29.7453 4.34 189.5 24 57.0 8.3131 0.149 29.7571 4.35 189.8 25 58.0 8.3097 0.151 29.7695 4.36 190.0 26 59.0 8.3080 0.152 29.7947 4.36 190.3 26 60.0 8.2970 0.153 29.8161 4.37 190.8 26 61.0 8.2727 0.145 29.8441 4.38 191.1 27 62.0 8.2636 0.153 29.8568 4.38 191.0 26 63.0 8.2583 0.136 29.8735 4.38 191.1 24 64.0 8.2584 0.135 29.8786 4.37 190.8 24 65.0 8.2591 0.135 29.8801 4.37 190.7 24 66.0 8.2590 0.132 29.8811 4.37 190.6 25 67.0 8.2561 0.134 29.9105 4.36 190.4 23 68.0 8.2622 0.147 29.9637 4.37 190.5 25 69.0 8.2711 0.156 29.9956 4.36 190.1 23 70.0 8.2730 0.142 30.0040 4.36 190.3 27 71.0 8.2728 0.144 30.0044 4.35 189.9 26 72.0 8.2737 0.132 30.0086 4.35 189.6 27 73.0 8.2741 0.144 30.0173 4.35 189.6 26 74.0 8.2755 0.152 30.0264 4.35 189.8 25 75.0 8.2674 0.149 30.0434 4.35 189.8 26 76.0 8.2523 0.132 30.0624 4.35 189.7 25 77.0 8.2481 0.120 30.0677 4.34 189.5 24 78.0 8.2501 0.133 30.0700 4.34 189.2 25 79.0 8.2536 0.122 30.0734 4.33 189.0 27 80.0 8.2540 0.120 30.0802 4.33 189.1 27 81.0 8.2563 0.139 30.0863 4.33 189.0 27 82.0 8.2615 0.122 30.0933 4.32 188.3 25 83.0 8.2655 0.120 30.0997 4.31 187.9 26 84.0 8.2819 0.117 30.1225 4.31 188.0 23 85.0 8.2890 0.128 30.1305 4.30 187.8 25 86.0 8.2882 0.142 30.1291 4.30 187.4 24 87.0 8.2896 0.135 30.1303 4.30 187.5 25 88.0 8.2936 0.139 30.1358 4.29 187.3 27 89.0 8.2928 0.132 30.1467 4.28 186.9 26 90.0 8.2929 0.124 30.1648 4.28 186.5 28 91.0 8.2929 0.147 30.1763 4.26 186.0 26 92.0 8.2876 0.123 30.1870 4.26 185.9 26 93.0 8.2860 0.137 30.1944 4.25 185.5 26 94.0 8.2870 0.141 30.2026 4.25 185.5 24 95.0 8.2899 0.148 30.2059 4.25 185.3 25 96.0 8.2933 0.137 30.2111 4.24 185.1 25 97.0 8.2956 0.152 30.2145 4.24 184.8 26 98.0 8.2982 0.153 30.2184 4.22 184.0 25 99.0 8.3048 0.146 30.2252 4.21 183.5 26 100.0 8.3158 0.132 30.2377 4.19 182.8 27 101.0 8.3250 0.146 30.2492 4.18 182.3 29 102.0 8.3287 0.137 30.2542 4.19 182.6 16