*2013/12/16 15:38:27.43 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2012/07/02 00:04:31.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 132 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : A8971E6D NUMBER OF CHANNELS : 7 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 4.204 135.006 2 Temperature:Primary 'deg C (ITS90)' 8.3845 13.1736 3 Fluorescence:URU:Wetlabs mg/m^3 0.125 1.28 4 Salinity:T0:C0 PSS-78 20.9081 30.3501 5 Oxygen:Dissolved:SBE mL/L 3.964 5.813 6 Oxygen:Dissolved:SBE umol/kg 172.8907 255.554 7 Number_of_bin_records n/a 23 58 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 6 F ' ' 1 7 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2012-49\Pro $END *ADMINISTRATION MISSION : 2012-49 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : Strait of Georgia Juvenile Salmon Survey SCIENTIST : Neville C. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Strait of Georgia / Juan de Fuca Strait STATION : 114 EVENT NUMBER : 34 LATITUDE : 48 56.67000 N ! (deg min) LONGITUDE : 123 24.69000 W ! (deg min) WATER DEPTH : 150 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0443 $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.1.2 2012/10/25 14:39:27 11228 11228 CLEAN 5.0.4 2012/10/25 14:45:21 11228 11228 MERGEHDR 1.1 2012/10/25 15:28:46 11228 11228 SHIFTDAT 3.4 2012/10/25 15:47:11 11228 11228 SHIFTDAT 3.4 2012/11/01 13:15:07 11228 11228 SHIFTDAT 3.4 2012/11/01 13:18:23 11228 11228 DELETE 6.3 2012/11/01 13:41:44 11228 4199 CTDEDIT 4.61 2012/11/01 15:45:47 4199 4009 CALIB 11.7 2012/11/01 17:12:39 4009 4009 FILTERS 4.3 2012/11/01 17:14:44 4009 4009 BINAVE 4.1.1 2012/11/01 17:15:47 4009 132 REMOVECH 8.1.1 2012/11/01 17:16:33 132 132 CHGUNITS 3.0 2012/11/01 17:17:57 132 132 MERGEHDR 1.1 2012/11/01 17:26:27 132 132 REORDER 1.3 2012/11/01 17:27:57 ? ? HDREDIT2 2.5.1 2012/11/01 17:34:24 ? ? CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:38:27 132 132 $END $REMARKS -CLEAN functions: 2012/10/25 14:42:58 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:Wetlabs:ECO-AFL # of Records to Advance (-ve for Delay): At REC# 0 Shift= 12.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 125.60 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT 2012/11/01 15:45:47 190 records were deleted in this editing session. 23 changes in channel Salinity:T0:C0 -CALIB parameters: 2012/11/01 17:12:39 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2012-49\Processing\doc\2012-49-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 14 Oxygen:Dissolved:SBE mL/L 10 0.4800000E-01 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:Wetlabs:ECO-AFL Fluorescence:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2012/11/01 17:16:33 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] pH:SBE [pH Units] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2012/11/01 17:34:24 Applied edit header: P:\Cruise_Data_Processing\2012-49\Processing\doc\2012-49-HDR.TXT Channel 1: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: Salinity:Practical:T0:C0 [PSS-78] Name: Salinity:T0:C0 ==> Salinity:Practical:T0:C0 $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2012-03A\2012-03A-0034hex.hex Software Version Seasave V 7.21d Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jul 02 2012 00:02:35 NMEA Latitude = 48 56.67 N NMEA Longitude = 123 24.69 W NMEA UTC (Time) = Jul 02 2012 00:04:31 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2012-03 Station: Depth(m): System UTC = Jul 01 2012 23:02:35 # nquan = 15 # nvalues = 11228 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity, Practical [PSU] # name 12 = sal11: Salinity, Practical, 2 [PSU] # name 13 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 14 = flag: flag # span 0 = 1, 11228 # span 1 = 1.138, 135.597 # span 2 = 8.3645, 18.4997 # span 3 = 8.3647, 20.5040 # span 4 = 0.010903, 3.223075 # span 5 = 0.000469, 3.223267 # span 6 = -0.5551, 53.2386 # span 7 = 1.7582, 2.5751 # span 8 = 4.767, 9.199 # span 9 = -1.499, 1.521 # span 10 = 0, 1 # span 11 = 0.0621, 30.3545 # span 12 = 0.0105, 30.3536 # span 13 = 3.90337, 6.21944 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Jul 02 2012 00:04:31 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 63507 # 12-Apr-11 # -4.435468e+004 # -1.845750e-001 # 1.192740e-002 # 3.979900e-002 # 0.000000e+000 # 2.993572e+001 # -3.336200e-004 # 3.759160e-006 # 1.565300e-009 # 0.99986626 # 5.62145 # 0.000000e+000 # 1.283280e-002 # -9.295010e+000 # # # # # # 2710 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.36717391e-003 # 6.46683268e-004 # 2.34981097e-005 # 2.22352352e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2128 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.01926507e+001 # 1.46093888e+000 # -2.51557628e-003 # 2.74924248e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # 0692 # Dec 2010 # 4.6518 # 2.5397 # # # # # # # # # # # # # # # 0997 # 23-Apr-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.8010e-001 # -0.4816 # 1.4264e-003 # 2.8936e-005 # -9.0212e-007 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 1.5600 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2216 # June 2012 # 1.30000000e+001 # # 0.0427 # # # # datcnv_date = Oct 24 2012 16:49:03, 7.21d [datcnv_vars = 11] # datcnv_in = P:\Cruise_Data_Processing\2012-49\RAW\CTD\2012-49-0034.hex P:\Crui se_Data_Processing\2012-49\Processing\doc\2012-49-ctd-new.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = Oct 25 2012 07:36:16, 7.21d # wildedit_in = P:\Cruise_Data_Processing\2012-49\Processing\convert\2012-49-003 4.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Oct 25 2012 11:24:40, 7.21d # alignctd_in = P:\Cruise_Data_Processing\2012-49\Processing\wildedit\2012-49-00 34.cnv # alignctd_adv = sbeox0V 4.000 # celltm_date = Oct 25 2012 12:57:08, 7.21d # celltm_in = P:\Cruise_Data_Processing\2012-49\Processing\align\2012-49-0034.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 9.0000, 9.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Oct 25 2012 13:00:24, 7.21d [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2012-49\Processing\celltm\2012-49-0034.c nv P:\Cruise_Data_Processing\2012-57\Processing\doc\2012-57-ctd-new.xmlcon # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = yes # file_type = ascii END* CTDEDIT was used to remove records near the surface and bottom of the cast; salinity was cleaned lightly. Data Processing Notes: ---------------------------------------------------------------------- Fluorescence data are nominal and unedited, except that some records were removed in editing temperature and salinity. There was no calibration sampling for dissolved oxygen, but the results of cruise 2012-01 were used to derive DO concentration. A small correction was later added based on negative DO values found in the anoxic layer of Saanich Inlet. There was no calibration sampling for salinity, but the results of cruise 2012-01 in February 2012 suggest calibration drift is <0.001. The SBE pH sensor data has been removed from this file since there was no field calibration information available and there are concerns about how the sensor performs. For details on processing see processing report: 2012-49-proc.doc. ---------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.48E-01 1) $END !--1--- ---2---- ---3--- ---4---- --5--- --6-- -7-- !Pressu Temperat Fluores Salinity Oxygen Oxyge Numb !re ure: cence: :T0:C0 : n: er_o ! Primary URU: Dissol Disso ~bin ! Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- -------- ------ ----- ---- *END OF HEADER 4.2 13.1736 1.092 20.9081 5.81 255.6 25 4.9 13.0473 1.205 21.8501 5.74 251.9 23 6.1 12.8896 1.277 22.9058 5.53 242.7 29 7.0 12.7455 1.275 24.0042 5.26 230.7 31 8.0 12.4770 1.280 25.5380 5.13 224.8 32 9.0 11.7560 1.004 26.6747 5.17 226.2 28 10.0 11.4159 0.888 26.9450 5.20 227.7 26 10.9 11.4388 0.898 27.0520 5.20 227.5 25 12.0 11.4069 0.899 27.2568 5.20 227.2 27 13.0 11.3880 0.838 27.3594 5.20 227.6 29 14.0 11.4151 0.835 27.4366 5.20 227.6 29 15.0 11.4347 0.833 27.5142 5.20 227.4 31 16.0 11.4800 0.851 27.5591 5.19 226.9 31 17.0 11.4967 0.875 27.5931 5.14 224.6 30 18.0 11.4984 0.954 27.6329 5.09 222.4 28 19.0 11.4553 0.930 27.6914 5.05 220.9 29 20.0 11.3500 0.909 27.7853 5.00 218.6 28 21.0 11.3364 0.907 27.7997 4.95 216.4 30 22.0 11.2032 0.909 27.9102 4.93 215.6 28 23.0 11.1110 0.857 27.9821 4.93 215.4 28 24.0 11.0504 0.810 28.0302 4.91 214.4 30 25.0 11.0315 0.752 28.0471 4.88 213.2 31 26.0 10.9844 0.718 28.0883 4.86 212.2 29 27.0 10.9175 0.678 28.1396 4.82 210.7 29 28.0 10.8829 0.673 28.1687 4.77 208.6 29 29.0 10.8291 0.686 28.2076 4.72 206.1 31 30.0 10.7114 0.635 28.2747 4.67 204.2 28 31.0 10.6556 0.640 28.3128 4.66 203.8 29 32.0 10.5394 0.599 28.3711 4.67 204.0 30 33.0 10.4732 0.543 28.4658 4.66 203.8 31 34.0 10.4476 0.508 28.4889 4.63 202.3 30 35.0 10.4385 0.487 28.4942 4.60 200.9 29 36.0 10.3902 0.473 28.5249 4.57 199.6 25 37.0 10.2642 0.442 28.5837 4.53 197.9 29 38.0 10.1713 0.459 28.6050 4.47 195.4 32 39.0 10.0553 0.489 28.6262 4.45 194.2 32 40.0 9.9042 0.569 28.6989 4.45 194.2 31 41.0 9.8500 0.587 28.7551 4.43 193.6 31 42.0 9.7875 0.569 28.8117 4.43 193.7 32 43.0 9.7194 0.547 28.8754 4.43 193.5 32 44.0 9.6807 0.529 28.9155 4.42 193.1 32 45.0 9.6547 0.492 28.9528 4.42 193.0 31 46.0 9.6074 0.472 28.9798 4.42 193.1 31 47.0 9.5809 0.490 28.9920 4.42 193.1 31 48.0 9.5483 0.425 29.0159 4.42 192.8 32 49.0 9.5216 0.422 29.0384 4.42 193.0 33 50.0 9.5154 0.439 29.0447 4.41 192.8 34 51.0 9.5088 0.446 29.0520 4.40 192.2 32 52.0 9.4969 0.381 29.0769 4.39 191.9 28 53.0 9.4750 0.329 29.1198 4.39 191.9 31 54.0 9.4565 0.306 29.1376 4.39 191.6 31 55.0 9.4452 0.283 29.1475 4.38 191.3 32 56.0 9.4293 0.262 29.1591 4.38 191.2 30 57.0 9.4168 0.265 29.1686 4.37 190.6 31 58.0 9.3771 0.265 29.1928 4.36 190.5 30 59.0 9.3570 0.229 29.2213 4.36 190.4 33 60.0 9.3089 0.181 29.2509 4.36 190.3 33 61.0 9.2716 0.215 29.2661 4.36 190.1 30 62.0 9.2335 0.183 29.2783 4.34 189.6 29 63.0 9.1882 0.216 29.2850 4.33 189.2 31 64.0 9.1412 0.224 29.2975 4.33 189.0 33 65.0 9.0517 0.198 29.3438 4.32 188.7 31 66.0 9.0044 0.182 29.3706 4.32 188.4 29 67.0 8.9727 0.188 29.3876 4.32 188.4 31 68.0 8.9374 0.182 29.4082 4.31 188.1 33 69.0 8.8998 0.176 29.4279 4.30 187.6 32 70.0 8.8772 0.150 29.4400 4.30 187.9 30 71.0 8.8553 0.176 29.4524 4.32 188.6 28 72.0 8.7908 0.183 29.4793 4.34 189.2 30 73.0 8.7652 0.168 29.4904 4.34 189.3 32 74.0 8.7496 0.168 29.5003 4.34 189.6 29 75.0 8.7249 0.138 29.5227 4.34 189.3 29 76.0 8.6761 0.147 29.5681 4.33 189.1 29 77.0 8.6508 0.155 29.5882 4.33 189.1 30 78.0 8.6261 0.157 29.6059 4.34 189.3 30 79.0 8.6124 0.159 29.6231 4.34 189.2 28 80.0 8.5944 0.132 29.6364 4.34 189.4 28 81.0 8.5852 0.130 29.6460 4.34 189.5 30 82.0 8.5811 0.155 29.6546 4.34 189.3 30 83.0 8.5852 0.141 29.6544 4.34 189.4 29 84.0 8.5869 0.142 29.6550 4.33 189.1 29 85.0 8.5897 0.138 29.6551 4.33 188.9 30 86.0 8.5906 0.137 29.6571 4.33 188.9 30 87.0 8.5862 0.153 29.6643 4.34 189.2 28 88.0 8.5732 0.150 29.6720 4.34 189.2 27 89.0 8.5665 0.161 29.6732 4.34 189.3 29 90.0 8.5615 0.160 29.6787 4.34 189.5 29 91.0 8.5466 0.158 29.6949 4.34 189.4 29 92.0 8.5406 0.144 29.7015 4.34 189.3 28 93.0 8.5372 0.130 29.7071 4.34 189.3 28 94.0 8.5346 0.147 29.7182 4.33 189.1 31 95.0 8.5256 0.147 29.7403 4.33 189.1 31 96.0 8.5143 0.144 29.7531 4.33 189.1 30 97.0 8.5053 0.141 29.7611 4.34 189.2 28 98.0 8.4971 0.151 29.7654 4.34 189.3 30 99.0 8.4805 0.148 29.7710 4.34 189.4 32 100.0 8.4543 0.128 29.7799 4.34 189.5 29 101.0 8.4454 0.136 29.7813 4.34 189.2 28 102.0 8.4285 0.145 29.7882 4.35 189.7 29 103.0 8.4237 0.149 29.8116 4.35 189.8 32 104.0 8.4015 0.138 29.8310 4.33 189.0 30 105.0 8.4567 0.157 29.8587 4.34 189.2 30 106.0 8.4818 0.158 29.8685 4.32 188.4 30 107.0 8.5234 0.157 29.8840 4.24 184.9 31 108.0 8.6675 0.158 29.9265 4.18 182.2 29 109.0 8.8044 0.170 29.9887 4.15 181.2 29 110.0 8.7681 0.166 30.0162 4.16 181.3 27 111.0 8.7302 0.168 30.0351 4.14 180.6 30 112.0 8.7304 0.168 30.0395 4.15 181.1 31 113.0 8.7078 0.145 30.0406 4.16 181.6 30 114.0 8.6221 0.159 30.0471 4.16 181.4 29 115.0 8.5988 0.145 30.0825 4.16 181.3 32 116.0 8.5929 0.152 30.0953 4.16 181.3 31 117.0 8.5839 0.144 30.1011 4.15 181.2 29 118.0 8.5784 0.131 30.1055 4.15 181.1 23 119.0 8.5665 0.138 30.1112 4.15 181.0 23 120.0 8.5538 0.153 30.1148 4.14 180.4 29 121.0 8.5383 0.166 30.1227 4.12 179.7 24 122.0 8.5292 0.152 30.1368 4.10 178.7 29 123.0 8.5251 0.150 30.1471 4.08 178.0 33 124.0 8.5143 0.150 30.1690 4.07 177.7 33 125.0 8.4947 0.148 30.1958 4.08 177.9 34 126.0 8.4580 0.147 30.2383 4.11 179.2 31 127.0 8.4291 0.131 30.2653 4.13 180.1 31 128.0 8.4077 0.125 30.2804 4.13 180.2 31 129.0 8.4027 0.143 30.2837 4.12 179.6 34 130.0 8.3972 0.134 30.2923 4.09 178.4 34 131.0 8.3912 0.150 30.3003 4.05 176.4 33 132.0 8.3845 0.129 30.3148 4.00 174.4 32 133.0 8.3879 0.138 30.3298 3.97 173.2 43 134.0 8.3895 0.146 30.3403 3.96 172.9 32 135.0 8.3848 0.133 30.3501 3.97 173.0 58