*2013/12/16 15:38:27.40 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2012/07/01 18:05:59.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 93 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : F51DEBB4 NUMBER OF CHANNELS : 7 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 3.329 94.91 2 Temperature:Primary 'deg C (ITS90)' 8.5688 13.7599 3 Fluorescence:URU:Wetlabs mg/m^3 0.128 1.565 4 Salinity:T0:C0 PSS-78 1.6284 30.2816 5 Oxygen:Dissolved:SBE mL/L 3.869 7.098 6 Oxygen:Dissolved:SBE umol/kg 168.7677 316.7032 7 Number_of_bin_records n/a 16 37 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 6 F ' ' 1 7 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2012-49\Pro $END *ADMINISTRATION MISSION : 2012-49 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : Strait of Georgia Juvenile Salmon Survey SCIENTIST : Neville C. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Strait of Georgia / Juan de Fuca Strait STATION : 108 EVENT NUMBER : 33 LATITUDE : 49 13.65000 N ! (deg min) LONGITUDE : 123 18.20000 W ! (deg min) WATER DEPTH : 115 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0443 $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.1.2 2012/10/25 14:39:24 7495 7495 CLEAN 5.0.4 2012/10/25 14:45:18 7495 7495 MERGEHDR 1.1 2012/10/25 15:28:44 7495 7495 SHIFTDAT 3.4 2012/10/25 15:47:09 7495 7495 SHIFTDAT 3.4 2012/11/01 13:15:05 7495 7495 SHIFTDAT 3.4 2012/11/01 13:18:20 7495 7495 DELETE 6.3 2012/11/01 13:41:41 7495 2690 CTDEDIT 4.61 2012/11/01 15:42:11 2690 2603 CALIB 11.7 2012/11/01 17:12:38 2603 2603 FILTERS 4.3 2012/11/01 17:14:43 2603 2603 BINAVE 4.1.1 2012/11/01 17:15:46 2603 93 REMOVECH 8.1.1 2012/11/01 17:16:33 93 93 CHGUNITS 3.0 2012/11/01 17:17:57 93 93 MERGEHDR 1.1 2012/11/01 17:26:27 93 93 REORDER 1.3 2012/11/01 17:27:57 ? ? HDREDIT2 2.5.1 2012/11/01 17:34:24 ? ? CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:38:27 93 93 $END $REMARKS -CLEAN functions: 2012/10/25 14:42:58 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:Wetlabs:ECO-AFL # of Records to Advance (-ve for Delay): At REC# 0 Shift= 12.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 85.70 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT 2012/11/01 15:42:11 87 records were deleted in this editing session. 3 changes in channel Salinity:T0:C0 -CALIB parameters: 2012/11/01 17:12:38 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2012-49\Processing\doc\2012-49-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 14 Oxygen:Dissolved:SBE mL/L 10 0.4800000E-01 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:Wetlabs:ECO-AFL Fluorescence:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2012/11/01 17:16:33 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] pH:SBE [pH Units] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2012/11/01 17:34:24 Applied edit header: P:\Cruise_Data_Processing\2012-49\Processing\doc\2012-49-HDR.TXT Channel 1: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: Salinity:Practical:T0:C0 [PSS-78] Name: Salinity:T0:C0 ==> Salinity:Practical:T0:C0 $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2012-03A\2012-03A-0033hex.hex Software Version Seasave V 7.21d Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jul 01 2012 18:04:04 NMEA Latitude = 49 13.65 N NMEA Longitude = 123 18.20 W NMEA UTC (Time) = Jul 01 2012 18:05:59 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2012-03 Station: Depth(m): System UTC = Jul 01 2012 17:04:04 # nquan = 15 # nvalues = 7495 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity, Practical [PSU] # name 12 = sal11: Salinity, Practical, 2 [PSU] # name 13 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 14 = flag: flag # span 0 = 1, 7495 # span 1 = 1.450, 95.700 # span 2 = 8.5630, 14.6332 # span 3 = 8.5629, 14.9370 # span 4 = 0.003455, 3.258366 # span 5 = -0.001646, 3.258390 # span 6 = -0.2853, 60.2544 # span 7 = 1.7534, 2.6569 # span 8 = 4.870, 9.250 # span 9 = -1.460, 1.538 # span 10 = 0, 1 # span 11 = 0.0240, 30.2848 # span 12 = 0.0000, 30.2849 # span 13 = 3.81753, 7.06620 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Jul 01 2012 18:05:59 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 63507 # 12-Apr-11 # -4.435468e+004 # -1.845750e-001 # 1.192740e-002 # 3.979900e-002 # 0.000000e+000 # 2.993572e+001 # -3.336200e-004 # 3.759160e-006 # 1.565300e-009 # 0.99986626 # 5.62145 # 0.000000e+000 # 1.283280e-002 # -9.295010e+000 # # # # # # 2710 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.36717391e-003 # 6.46683268e-004 # 2.34981097e-005 # 2.22352352e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2128 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.01926507e+001 # 1.46093888e+000 # -2.51557628e-003 # 2.74924248e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # 0692 # Dec 2010 # 4.6518 # 2.5397 # # # # # # # # # # # # # # # 0997 # 23-Apr-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.8010e-001 # -0.4816 # 1.4264e-003 # 2.8936e-005 # -9.0212e-007 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 1.5600 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2216 # June 2012 # 1.30000000e+001 # # 0.0427 # # # # datcnv_date = Oct 24 2012 16:49:01, 7.21d [datcnv_vars = 11] # datcnv_in = P:\Cruise_Data_Processing\2012-49\RAW\CTD\2012-49-0033.hex P:\Crui se_Data_Processing\2012-49\Processing\doc\2012-49-ctd-new.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = Oct 25 2012 07:36:15, 7.21d # wildedit_in = P:\Cruise_Data_Processing\2012-49\Processing\convert\2012-49-003 3.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Oct 25 2012 11:24:39, 7.21d # alignctd_in = P:\Cruise_Data_Processing\2012-49\Processing\wildedit\2012-49-00 33.cnv # alignctd_adv = sbeox0V 4.000 # celltm_date = Oct 25 2012 12:57:07, 7.21d # celltm_in = P:\Cruise_Data_Processing\2012-49\Processing\align\2012-49-0033.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 9.0000, 9.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Oct 25 2012 13:00:24, 7.21d [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2012-49\Processing\celltm\2012-49-0033.c nv P:\Cruise_Data_Processing\2012-57\Processing\doc\2012-57-ctd-new.xmlcon # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = yes # file_type = ascii END* CTDEDIT was used to remove records near the surface and bottom of the cast; salinity was cleaned lightly. Data Processing Notes: ---------------------------------------------------------------------- Fluorescence data are nominal and unedited, except that some records were removed in editing temperature and salinity. There was no calibration sampling for dissolved oxygen, but the results of cruise 2012-01 were used to derive DO concentration. A small correction was later added based on negative DO values found in the anoxic layer of Saanich Inlet. There was no calibration sampling for salinity, but the results of cruise 2012-01 in February 2012 suggest calibration drift is <0.001. The SBE pH sensor data has been removed from this file since there was no field calibration information available and there are concerns about how the sensor performs. For details on processing see processing report: 2012-49-proc.doc. ---------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.48E-01 1) $END !--1--- ---2---- ---3--- ---4---- --5--- --6-- -7-- !Pressu Temperat Fluores Salinity Oxygen Oxyge Numb !re ure: cence: :T0:C0 : n: er_o ! Primary URU: Dissol Disso ~bin ! Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- -------- ------ ----- ---- *END OF HEADER 3.3 13.7599 1.005 1.6284 7.10 316.7 16 3.9 13.7543 1.061 1.6781 6.97 310.8 37 5.0 13.7579 1.248 3.4313 6.61 294.3 33 6.0 13.6618 1.565 10.9493 5.96 263.9 30 7.0 13.5745 1.400 12.5317 5.81 257.0 28 8.0 13.0060 1.127 17.8132 5.72 252.1 25 9.0 12.3712 0.866 22.5662 5.59 245.5 26 10.0 12.3496 0.947 23.8494 5.25 230.1 28 11.0 11.9651 1.055 25.5145 4.90 214.5 27 12.0 11.4416 0.963 26.3674 4.76 208.4 27 13.0 10.5094 0.865 27.6443 4.74 207.3 26 14.0 10.3049 0.896 27.9400 4.70 205.3 27 15.0 10.2427 0.841 28.0316 4.67 204.0 27 16.0 9.9717 0.612 28.2590 4.62 201.9 29 17.0 9.6000 0.395 28.6714 4.51 196.9 29 18.0 9.5049 0.357 28.8303 4.36 190.6 31 19.0 9.3692 0.336 29.1277 4.33 188.9 23 20.0 9.3164 0.348 29.3390 4.33 189.2 27 21.0 9.2741 0.303 29.3545 4.34 189.5 25 22.0 9.2610 0.313 29.3701 4.33 188.9 26 23.0 9.2585 0.319 29.3790 4.30 187.8 25 24.0 9.2712 0.340 29.4083 4.28 186.8 25 25.0 9.2611 0.333 29.4568 4.26 186.0 27 26.0 9.2395 0.315 29.4950 4.25 185.4 28 27.0 9.1813 0.304 29.5548 4.26 185.7 28 28.0 9.1463 0.283 29.5790 4.26 185.9 28 29.0 9.1123 0.259 29.5895 4.26 185.8 27 30.0 9.0893 0.264 29.6246 4.25 185.4 25 31.0 9.0813 0.268 29.6375 4.23 184.6 26 32.0 9.0805 0.257 29.6397 4.23 184.6 25 33.0 9.0631 0.238 29.6471 4.24 185.1 27 34.0 8.9837 0.201 29.6455 4.25 185.5 25 35.0 8.9199 0.189 29.6582 4.26 185.9 26 36.0 8.8561 0.163 29.6580 4.27 186.5 26 37.0 8.7901 0.174 29.6496 4.29 187.2 27 38.0 8.7104 0.149 29.6446 4.30 187.7 29 39.0 8.6476 0.181 29.6436 4.32 188.3 29 40.0 8.6081 0.141 29.6540 4.32 188.7 29 41.0 8.5817 0.150 29.6542 4.33 188.9 28 42.0 8.5720 0.139 29.6672 4.33 188.9 26 43.0 8.5688 0.156 29.6888 4.32 188.6 27 44.0 8.5991 0.146 29.7156 4.32 188.4 26 45.0 8.6118 0.157 29.7298 4.32 188.6 26 46.0 8.6145 0.159 29.7380 4.32 188.3 27 47.0 8.6396 0.150 29.7458 4.28 186.8 28 48.0 8.7285 0.131 29.7741 4.26 185.8 28 49.0 8.7865 0.128 29.8106 4.23 184.4 29 50.0 8.7970 0.159 29.8282 4.19 182.9 28 51.0 8.8469 0.164 29.8676 4.18 182.3 27 52.0 8.8750 0.177 29.8809 4.17 182.0 22 53.0 8.8887 0.199 29.8875 4.17 181.8 26 54.0 8.8899 0.201 29.8886 4.16 181.5 25 55.0 8.8951 0.196 29.8931 4.15 180.9 27 56.0 8.9066 0.195 29.8991 4.14 180.6 27 57.0 8.9145 0.214 29.9017 4.14 180.6 27 58.0 8.9191 0.195 29.9018 4.13 180.2 29 59.0 8.9199 0.212 29.9035 4.12 180.0 29 60.0 8.9178 0.206 29.9076 4.09 178.7 28 61.0 8.9167 0.210 29.9230 4.07 177.6 26 62.0 8.9167 0.183 29.9737 4.07 177.4 21 63.0 8.9104 0.190 29.9881 4.07 177.5 22 64.0 8.8971 0.170 30.0100 4.07 177.7 21 65.0 8.8966 0.187 30.0121 4.07 177.7 27 66.0 8.8953 0.178 30.0166 4.08 178.0 26 67.0 8.8895 0.193 30.0254 4.09 178.4 27 68.0 8.8838 0.179 30.0413 4.08 178.1 28 69.0 8.8800 0.159 30.0553 4.08 177.9 30 70.0 8.8826 0.177 30.0664 4.06 177.2 29 71.0 8.8883 0.180 30.0749 4.02 175.3 30 72.0 8.8990 0.175 30.0873 4.00 174.4 30 73.0 8.9056 0.166 30.0955 3.98 173.6 29 74.0 8.9033 0.189 30.1014 3.96 172.9 24 75.0 8.9116 0.173 30.1156 3.97 173.1 28 76.0 8.9125 0.197 30.1206 3.97 173.1 29 77.0 8.9134 0.188 30.1342 3.97 173.3 29 78.0 8.9172 0.188 30.1556 3.98 173.6 30 79.0 8.9208 0.169 30.1786 3.97 173.1 30 80.0 8.9374 0.182 30.2056 3.94 172.0 31 81.0 8.9385 0.202 30.2220 3.92 171.1 25 82.0 8.9324 0.197 30.2356 3.92 170.9 29 83.0 8.9312 0.187 30.2435 3.92 170.9 30 84.0 8.9313 0.194 30.2465 3.92 170.9 31 85.0 8.9312 0.189 30.2499 3.92 170.8 29 86.0 8.9301 0.189 30.2540 3.91 170.7 30 87.0 8.9301 0.196 30.2543 3.92 170.8 31 88.0 8.9301 0.192 30.2554 3.92 171.0 30 89.0 8.9298 0.204 30.2574 3.91 170.7 30 90.0 8.9298 0.200 30.2580 3.91 170.5 30 91.0 8.9294 0.202 30.2603 3.90 170.2 30 92.0 8.9286 0.196 30.2637 3.89 169.7 30 93.0 8.9275 0.198 30.2685 3.88 169.4 30 94.0 8.9252 0.216 30.2761 3.87 168.9 30 94.9 8.9234 0.208 30.2816 3.87 168.8 35