*2013/12/16 15:38:27.11 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2012/06/29 17:59:51.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 86 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 7488BF88 NUMBER OF CHANNELS : 7 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 5.42 89.5 2 Temperature:Primary 'deg C (ITS90)' 8.0488 12.7058 3 Fluorescence:URU:Wetlabs mg/m^3 0.96E-01 2.541 4 Salinity:T0:C0 PSS-78 26.1675 30.1435 5 Oxygen:Dissolved:SBE mL/L 3.694 5.498 6 Oxygen:Dissolved:SBE umol/kg 161.1313 240.7242 7 Number_of_bin_records n/a 1 87 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 6 F ' ' 1 7 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2012-49\Pro $END *ADMINISTRATION MISSION : 2012-49 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : Strait of Georgia Juvenile Salmon Survey SCIENTIST : Neville C. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Strait of Georgia / Juan de Fuca Strait STATION : EVENT NUMBER : 27 LATITUDE : 49 35.67000 N ! (deg min) LONGITUDE : 124 41.93000 W ! (deg min) WATER DEPTH : 125 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0443 $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.1.2 2012/10/25 14:39:00 7038 7038 CLEAN 5.0.4 2012/10/25 14:44:54 7038 7038 MERGEHDR 1.1 2012/10/25 15:28:21 7038 7038 SHIFTDAT 3.4 2012/10/25 15:46:46 7038 7038 SHIFTDAT 3.4 2012/11/01 13:14:42 7038 7038 SHIFTDAT 3.4 2012/11/01 13:17:57 7038 7038 DELETE 6.3 2012/11/01 13:41:22 7038 2997 CTDEDIT 4.61 2012/11/01 15:19:55 2997 2752 CALIB 11.7 2012/11/01 17:12:28 2752 2752 FILTERS 4.3 2012/11/01 17:14:34 2752 2752 BINAVE 4.1.1 2012/11/01 17:15:41 2752 86 REMOVECH 8.1.1 2012/11/01 17:16:33 86 86 CHGUNITS 3.0 2012/11/01 17:17:57 86 86 MERGEHDR 1.1 2012/11/01 17:26:27 86 86 REORDER 1.3 2012/11/01 17:27:57 ? ? HDREDIT2 2.5.1 2012/11/01 17:34:24 ? ? CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:38:27 86 86 $END $REMARKS -CLEAN functions: 2012/10/25 14:42:58 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:Wetlabs:ECO-AFL # of Records to Advance (-ve for Delay): At REC# 0 Shift= 12.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 79.65 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT 2012/11/01 15:19:55 245 records were deleted in this editing session. 5 changes in channel Salinity:T0:C0 -CALIB parameters: 2012/11/01 17:12:28 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2012-49\Processing\doc\2012-49-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 14 Oxygen:Dissolved:SBE mL/L 10 0.4800000E-01 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:Wetlabs:ECO-AFL Fluorescence:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2012/11/01 17:16:33 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] pH:SBE [pH Units] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2012/11/01 17:34:24 Applied edit header: P:\Cruise_Data_Processing\2012-49\Processing\doc\2012-49-HDR.TXT Channel 1: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: Salinity:Practical:T0:C0 [PSS-78] Name: Salinity:T0:C0 ==> Salinity:Practical:T0:C0 $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2012-03A\2012-03A-0027.hex Software Version Seasave V 7.21d Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jun 29 2012 17:57:57 NMEA Latitude = 49 35.67 N NMEA Longitude = 124 41.93 W NMEA UTC (Time) = Jun 29 2012 17:59:51 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2012-03 Station: Depth(m): System UTC = Jun 29 2012 16:57:57 # nquan = 15 # nvalues = 7038 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity, Practical [PSU] # name 12 = sal11: Salinity, Practical, 2 [PSU] # name 13 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 14 = flag: flag # span 0 = 1, 7038 # span 1 = 1.927, 89.652 # span 2 = 8.0480, 13.2191 # span 3 = 8.0482, 13.4464 # span 4 = 0.686713, 3.193042 # span 5 = 1.885230, 3.193051 # span 6 = -0.0789, 41.7941 # span 7 = 1.6716, 2.4335 # span 8 = 4.857, 9.020 # span 9 = -1.130, 1.206 # span 10 = 0, 1 # span 11 = 5.0016, 30.1474 # span 12 = 14.9581, 30.1479 # span 13 = 3.64104, 6.25454 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Jun 29 2012 17:59:51 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 63507 # 12-Apr-11 # -4.435468e+004 # -1.845750e-001 # 1.192740e-002 # 3.979900e-002 # 0.000000e+000 # 2.993572e+001 # -3.336200e-004 # 3.759160e-006 # 1.565300e-009 # 0.99986626 # 5.62145 # 0.000000e+000 # 1.283280e-002 # -9.295010e+000 # # # # # # 2710 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.36717391e-003 # 6.46683268e-004 # 2.34981097e-005 # 2.22352352e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2128 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.01926507e+001 # 1.46093888e+000 # -2.51557628e-003 # 2.74924248e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # 0692 # Dec 2010 # 4.6518 # 2.5397 # # # # # # # # # # # # # # # 0997 # 23-Apr-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.8010e-001 # -0.4816 # 1.4264e-003 # 2.8936e-005 # -9.0212e-007 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 1.5600 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2216 # June 2012 # 1.30000000e+001 # # 0.0427 # # # # datcnv_date = Oct 24 2012 16:48:49, 7.21d [datcnv_vars = 11] # datcnv_in = P:\Cruise_Data_Processing\2012-49\RAW\CTD\2012-49-0027.hex P:\Crui se_Data_Processing\2012-49\Processing\doc\2012-49-ctd-new.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = Oct 25 2012 07:36:09, 7.21d # wildedit_in = P:\Cruise_Data_Processing\2012-49\Processing\convert\2012-49-002 7.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Oct 25 2012 11:24:32, 7.21d # alignctd_in = P:\Cruise_Data_Processing\2012-49\Processing\wildedit\2012-49-00 27.cnv # alignctd_adv = sbeox0V 4.000 # celltm_date = Oct 25 2012 12:57:01, 7.21d # celltm_in = P:\Cruise_Data_Processing\2012-49\Processing\align\2012-49-0027.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 9.0000, 9.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Oct 25 2012 13:00:14, 7.21d [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2012-49\Processing\celltm\2012-49-0027.c nv P:\Cruise_Data_Processing\2012-57\Processing\doc\2012-57-ctd-new.xmlcon # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = yes # file_type = ascii END* CTDEDIT was used to remove records near the surface and bottom of the cast; salinity was cleaned lightly. Data Processing Notes: ---------------------------------------------------------------------- Fluorescence data are nominal and unedited, except that some records were removed in editing temperature and salinity. There was no calibration sampling for dissolved oxygen, but the results of cruise 2012-01 were used to derive DO concentration. A small correction was later added based on negative DO values found in the anoxic layer of Saanich Inlet. There was no calibration sampling for salinity, but the results of cruise 2012-01 in February 2012 suggest calibration drift is <0.001. The SBE pH sensor data has been removed from this file since there was no field calibration information available and there are concerns about how the sensor performs. For details on processing see processing report: 2012-49-proc.doc. ---------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.48E-01 1) $END !--1--- ---2---- ---3--- ---4---- --5--- --6-- -7-- !Pressu Temperat Fluores Salinity Oxygen Oxyge Numb !re ure: cence: :T0:C0 : n: er_o ! Primary URU: Dissol Disso ~bin ! Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- -------- ------ ----- ---- *END OF HEADER 5.4 12.7058 2.489 26.1676 5.50 240.7 5 6.0 12.7008 2.444 26.1675 5.50 240.7 22 7.0 12.6748 2.466 26.1683 5.50 240.6 24 8.0 12.6649 2.541 26.1699 5.42 237.4 26 9.0 12.6633 2.494 26.1698 5.21 228.1 25 10.0 12.6572 2.518 26.1718 4.97 217.8 23 11.0 12.5310 2.421 26.3144 4.80 210.3 24 12.0 12.0866 2.037 26.8115 4.69 205.3 27 13.0 11.5896 1.574 27.2346 4.60 201.2 26 14.0 11.3907 1.266 27.3440 4.54 198.7 24 15.0 11.1711 1.167 27.4500 4.54 198.5 23 16.0 10.8539 1.072 27.5980 4.56 199.4 23 17.0 10.7644 0.975 27.7195 4.55 198.8 23 18.0 10.7198 0.886 27.7984 4.52 197.4 26 19.0 10.6209 0.895 27.9461 4.49 196.0 28 20.0 10.4901 0.876 28.0183 4.49 196.0 28 21.0 10.4092 0.800 28.0459 4.51 196.9 31 22.0 10.3661 0.732 28.0719 4.51 197.2 33 23.0 10.3484 0.719 28.1251 4.52 197.5 27 24.0 10.3294 0.717 28.1832 4.55 198.7 27 25.0 10.3064 0.692 28.3392 4.48 195.7 31 26.0 10.3246 0.626 28.4959 4.33 189.3 28 27.0 10.1853 0.495 28.5630 4.27 186.6 23 28.0 10.0296 0.465 28.6281 4.26 186.3 24 29.0 9.8371 0.374 28.7466 4.26 186.3 32 30.0 9.7975 0.376 28.7839 4.26 186.2 31 31.0 9.7059 0.346 28.8680 4.27 186.4 26 32.0 9.6520 0.310 28.9124 4.28 186.7 33 33.0 9.6394 0.310 28.9257 4.28 187.0 33 34.0 9.6242 0.294 28.9526 4.28 187.0 27 35.0 9.5897 0.273 29.0102 4.28 186.8 25 36.0 9.5770 0.241 29.0233 4.28 186.7 30 37.0 9.5705 0.251 29.0294 4.28 186.8 29 38.0 9.5586 0.245 29.0460 4.27 186.6 29 39.0 9.5437 0.240 29.0622 4.27 186.4 31 40.0 9.5286 0.232 29.0796 4.24 185.4 33 41.0 9.5135 0.226 29.0979 4.21 183.9 31 42.0 9.4636 0.230 29.1384 4.20 183.5 29 43.0 9.3706 0.202 29.2011 4.20 183.3 31 44.0 9.3552 0.198 29.2091 4.17 182.1 30 45.0 9.3369 0.195 29.2200 4.15 181.2 27 46.0 9.2907 0.190 29.2432 4.15 181.4 29 47.0 9.2326 0.193 29.2811 4.16 181.7 33 48.0 9.2162 0.194 29.2972 4.17 182.1 29 49.0 9.1944 0.169 29.3105 4.18 182.4 31 50.0 9.1925 0.158 29.3189 4.18 182.5 31 51.0 9.1813 0.176 29.3333 4.16 181.6 31 52.0 9.1495 0.168 29.3560 4.14 180.8 28 53.0 9.1050 0.155 29.3839 4.12 179.8 29 54.0 9.0142 0.186 29.4399 4.11 179.3 32 55.0 8.9755 0.185 29.4631 4.09 178.5 30 56.0 8.9012 0.168 29.5066 4.08 178.1 28 57.0 8.8455 0.164 29.5368 4.08 178.2 27 58.0 8.8175 0.159 29.5515 4.06 177.3 36 59.0 8.7918 0.165 29.5685 4.05 176.8 31 60.0 8.7467 0.155 29.5915 4.02 175.5 30 61.0 8.7037 0.132 29.6107 3.97 173.3 34 62.0 8.6006 0.141 29.6632 3.93 171.4 29 63.0 8.4881 0.156 29.7228 3.88 169.5 28 64.0 8.4071 0.156 29.7757 3.86 168.2 32 65.0 8.3568 0.151 29.8193 3.88 169.3 33 66.0 8.2272 0.144 29.8783 3.90 170.4 31 67.0 8.1749 0.143 29.9074 3.92 171.2 35 68.0 8.1479 0.139 29.9277 3.93 171.3 35 69.0 8.1376 0.122 29.9356 3.92 171.2 32 70.0 8.1298 0.113 29.9411 3.92 171.1 32 71.0 8.1071 0.108 29.9632 3.91 170.4 31 72.0 8.0821 0.096 29.9946 3.89 169.9 30 73.0 8.0737 0.110 30.0111 3.88 169.5 36 74.0 8.0720 0.120 30.0177 3.88 169.3 36 75.0 8.0713 0.126 30.0214 3.88 169.1 35 76.0 8.0712 0.128 30.0250 3.87 168.9 36 77.0 8.0654 0.126 30.0353 3.87 169.0 34 78.0 8.0657 0.112 30.0357 3.88 169.3 36 79.0 8.0658 0.136 30.0361 3.89 169.7 36 80.0 8.0549 0.137 30.0406 3.86 168.2 36 81.0 8.0558 0.136 30.0577 3.81 166.2 44 82.0 8.0640 0.122 30.0738 3.79 165.3 44 83.0 8.0675 0.121 30.0782 3.77 164.3 51 84.0 8.0699 0.124 30.0837 3.76 163.8 50 85.0 8.0641 0.118 30.1002 3.73 162.7 54 86.0 8.0529 0.132 30.1238 3.70 161.5 65 86.8 8.0501 0.131 30.1355 3.70 161.4 30 88.0 8.0489 0.121 30.1428 3.69 161.1 80 89.0 8.0489 0.120 30.1435 3.70 161.2 87 89.5 8.0488 0.112 30.1431 3.70 161.3 1