*2013/12/16 15:38:26.57 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2012/06/27 18:22:11.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 113 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : F6CD9BB2 NUMBER OF CHANNELS : 7 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 5.031 117.04 2 Temperature:Primary 'deg C (ITS90)' 8.3036 16.622 3 Fluorescence:URU:Wetlabs mg/m^3 0.141 1.756 4 Salinity:T0:C0 PSS-78 22.9059 29.9219 5 Oxygen:Dissolved:SBE mL/L 3.67 6.033 6 Oxygen:Dissolved:SBE umol/kg 160.1189 265.0005 7 Number_of_bin_records n/a 20 69 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 6 F ' ' 1 7 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2012-49\Pro $END *ADMINISTRATION MISSION : 2012-49 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : Strait of Georgia Juvenile Salmon Survey SCIENTIST : Neville C. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Strait of Georgia / Juan de Fuca Strait STATION : 70 EVENT NUMBER : 20 LATITUDE : 50 10.26000 N ! (deg min) LONGITUDE : 125 8.61000 W ! (deg min) WATER DEPTH : 142 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0443 $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.1.2 2012/10/25 14:38:17 8528 8528 CLEAN 5.0.4 2012/10/25 14:44:08 8528 8528 MERGEHDR 1.1 2012/10/25 15:27:37 8528 8528 SHIFTDAT 3.4 2012/10/25 15:46:02 8528 8528 SHIFTDAT 3.4 2012/11/01 13:13:57 8528 8528 SHIFTDAT 3.4 2012/11/01 13:17:12 8528 8528 DELETE 6.3 2012/11/01 13:40:47 8528 3347 CTDEDIT 4.61 2012/11/01 14:46:57 3347 3180 CALIB 11.7 2012/11/01 17:12:09 3180 3180 FILTERS 4.3 2012/11/01 17:14:15 3180 3180 BINAVE 4.1.1 2012/11/01 17:15:31 3180 113 REMOVECH 8.1.1 2012/11/01 17:16:32 113 113 CHGUNITS 3.0 2012/11/01 17:17:56 113 113 MERGEHDR 1.1 2012/11/01 17:26:26 113 113 REORDER 1.3 2012/11/01 17:27:56 ? ? HDREDIT2 2.5.1 2012/11/01 17:34:23 ? ? CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:38:26 113 113 $END $REMARKS -CLEAN functions: 2012/10/25 14:42:58 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:Wetlabs:ECO-AFL # of Records to Advance (-ve for Delay): At REC# 0 Shift= 12.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 107.39 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT 2012/11/01 14:46:57 167 records were deleted in this editing session. 5 changes in channel Salinity:T0:C0 -CALIB parameters: 2012/11/01 17:12:09 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2012-49\Processing\doc\2012-49-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 14 Oxygen:Dissolved:SBE mL/L 10 0.4800000E-01 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:Wetlabs:ECO-AFL Fluorescence:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2012/11/01 17:16:32 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] pH:SBE [pH Units] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2012/11/01 17:34:23 Applied edit header: P:\Cruise_Data_Processing\2012-49\Processing\doc\2012-49-HDR.TXT Channel 1: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: Salinity:Practical:T0:C0 [PSS-78] Name: Salinity:T0:C0 ==> Salinity:Practical:T0:C0 $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2012-03A\2012-03A-0020.hex Software Version Seasave V 7.21d Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jun 27 2012 18:20:19 NMEA Latitude = 50 10.26 N NMEA Longitude = 125 08.61 W NMEA UTC (Time) = Jun 27 2012 18:22:11 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2012-03 Station: Depth(m): System UTC = Jun 27 2012 17:20:19 # nquan = 15 # nvalues = 8528 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity, Practical [PSU] # name 12 = sal11: Salinity, Practical, 2 [PSU] # name 13 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 14 = flag: flag # span 0 = 1, 8528 # span 1 = 1.153, 117.391 # span 2 = 8.3021, 16.8508 # span 3 = 8.3024, 17.2384 # span 4 = 0.026835, 3.181543 # span 5 = -0.412202, 3.181618 # span 6 = -0.5551, 64.4449 # span 7 = 1.6654, 2.7106 # span 8 = 4.319, 9.279 # span 9 = -1.935, 1.172 # span 10 = 0, 1 # span 11 = 0.1550, 29.9234 # span 12 = 0.0000, 29.9234 # span 13 = 3.61999, 6.63538 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Jun 27 2012 18:22:11 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 63507 # 12-Apr-11 # -4.435468e+004 # -1.845750e-001 # 1.192740e-002 # 3.979900e-002 # 0.000000e+000 # 2.993572e+001 # -3.336200e-004 # 3.759160e-006 # 1.565300e-009 # 0.99986626 # 5.62145 # 0.000000e+000 # 1.283280e-002 # -9.295010e+000 # # # # # # 2710 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.36717391e-003 # 6.46683268e-004 # 2.34981097e-005 # 2.22352352e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2128 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.01926507e+001 # 1.46093888e+000 # -2.51557628e-003 # 2.74924248e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # 0692 # Dec 2010 # 4.6518 # 2.5397 # # # # # # # # # # # # # # # 0997 # 23-Apr-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.8010e-001 # -0.4816 # 1.4264e-003 # 2.8936e-005 # -9.0212e-007 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 1.5600 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2216 # June 2012 # 1.30000000e+001 # # 0.0427 # # # # datcnv_date = Oct 24 2012 16:48:27, 7.21d [datcnv_vars = 11] # datcnv_in = P:\Cruise_Data_Processing\2012-49\RAW\CTD\2012-49-0020.hex P:\Crui se_Data_Processing\2012-49\Processing\doc\2012-49-ctd-new.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = Oct 25 2012 07:35:56, 7.21d # wildedit_in = P:\Cruise_Data_Processing\2012-49\Processing\convert\2012-49-002 0.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Oct 25 2012 11:24:19, 7.21d # alignctd_in = P:\Cruise_Data_Processing\2012-49\Processing\wildedit\2012-49-00 20.cnv # alignctd_adv = sbeox0V 4.000 # celltm_date = Oct 25 2012 12:56:44, 7.21d # celltm_in = P:\Cruise_Data_Processing\2012-49\Processing\align\2012-49-0020.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 9.0000, 9.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Oct 25 2012 12:59:55, 7.21d [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2012-49\Processing\celltm\2012-49-0020.c nv P:\Cruise_Data_Processing\2012-57\Processing\doc\2012-57-ctd-new.xmlcon # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = yes # file_type = ascii END* CTDEDIT was used to remove records near the surface; salinity was cleaned lightly. Data Processing Notes: ---------------------------------------------------------------------- Fluorescence data are nominal and unedited, except that some records were removed in editing temperature and salinity. There was no calibration sampling for dissolved oxygen, but the results of cruise 2012-01 were used to derive DO concentration. A small correction was later added based on negative DO values found in the anoxic layer of Saanich Inlet. There was no calibration sampling for salinity, but the results of cruise 2012-01 in February 2012 suggest calibration drift is <0.001. The SBE pH sensor data has been removed from this file since there was no field calibration information available and there are concerns about how the sensor performs. For details on processing see processing report: 2012-49-proc.doc. ---------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.48E-01 1) $END !--1--- ---2---- ---3--- ---4---- --5--- --6-- -7-- !Pressu Temperat Fluores Salinity Oxygen Oxyge Numb !re ure: cence: :T0:C0 : n: er_o ! Primary URU: Dissol Disso ~bin ! Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- -------- ------ ----- ---- *END OF HEADER 5.0 16.6220 1.455 22.9059 6.03 265.0 48 6.0 16.5622 1.624 22.9126 5.97 262.3 38 7.0 16.5559 1.737 23.0132 5.70 250.4 36 8.0 16.4094 1.743 23.2573 5.38 236.4 35 9.0 15.5594 1.756 24.0965 5.17 226.8 31 10.0 14.5501 1.678 24.9256 5.09 223.1 30 11.0 13.8173 1.441 25.5348 5.09 223.0 31 12.0 13.2097 1.253 26.0466 5.11 223.7 29 13.0 13.0034 1.181 26.2164 5.14 224.8 29 14.0 12.8331 1.133 26.3626 5.15 225.3 30 15.0 12.7738 1.128 26.4093 5.11 223.9 29 16.0 12.7328 1.143 26.4427 5.06 221.6 28 17.0 12.6649 1.090 26.4951 4.97 217.8 28 18.0 12.5596 1.073 26.5766 4.87 213.2 27 19.0 12.4205 1.046 26.6931 4.76 208.5 27 20.0 12.0621 0.944 26.9983 4.68 204.8 27 21.0 11.7869 0.869 27.2271 4.61 201.8 28 22.0 11.4583 0.782 27.4886 4.60 201.0 27 23.0 11.1730 0.722 27.7108 4.61 201.7 28 24.0 11.0039 0.671 27.8423 4.62 201.8 27 25.0 10.9872 0.669 27.8561 4.60 201.0 28 26.0 10.9308 0.671 27.9025 4.60 201.1 27 27.0 10.8967 0.650 27.9306 4.60 201.2 27 28.0 10.8685 0.636 27.9543 4.60 200.9 28 29.0 10.8538 0.659 27.9677 4.59 200.6 28 30.0 10.8342 0.618 27.9829 4.58 200.3 27 31.0 10.8180 0.610 27.9964 4.58 200.2 29 32.0 10.8060 0.623 28.0054 4.58 200.3 28 33.0 10.8051 0.624 28.0075 4.59 200.4 28 34.0 10.8038 0.623 28.0099 4.58 200.1 28 35.0 10.8051 0.618 28.0095 4.56 199.5 28 36.0 10.8096 0.627 28.0073 4.56 199.4 27 37.0 10.8071 0.620 28.0099 4.53 197.9 27 38.0 10.7837 0.616 28.0272 4.45 194.4 27 39.0 10.7402 0.637 28.0579 4.39 191.8 27 40.0 10.6319 0.589 28.1302 4.38 191.2 26 41.0 10.4028 0.537 28.2818 4.39 191.8 28 42.0 10.3467 0.542 28.3186 4.38 191.3 25 43.0 10.3397 0.536 28.3236 4.31 188.2 28 44.0 10.3114 0.485 28.3427 4.16 181.5 28 45.0 10.2368 0.491 28.3909 4.01 175.3 27 46.0 9.9656 0.471 28.5746 3.94 171.9 26 47.0 9.5675 0.374 28.8574 3.91 170.6 26 48.0 9.3094 0.312 29.0270 3.90 170.2 26 49.0 9.1683 0.281 29.1174 3.89 169.9 26 50.0 9.0759 0.281 29.1964 3.88 169.5 27 51.0 9.0217 0.253 29.2400 3.86 168.5 27 52.0 8.9849 0.253 29.2727 3.83 167.4 27 53.0 8.9014 0.227 29.3543 3.81 166.1 27 54.0 8.8117 0.205 29.4364 3.79 165.5 28 55.0 8.7351 0.198 29.5138 3.79 165.2 26 56.0 8.6826 0.211 29.5659 3.79 165.2 26 57.0 8.6292 0.208 29.6191 3.78 165.1 25 58.0 8.6047 0.194 29.6392 3.78 165.0 26 59.0 8.6036 0.185 29.6413 3.77 164.5 26 60.0 8.6012 0.196 29.6445 3.76 164.0 27 61.0 8.5760 0.192 29.6700 3.75 163.6 24 62.0 8.5392 0.169 29.7086 3.75 163.8 27 63.0 8.5334 0.172 29.7176 3.75 163.6 27 64.0 8.5277 0.160 29.7272 3.74 163.4 26 65.0 8.5259 0.173 29.7359 3.74 163.3 28 66.0 8.5274 0.186 29.7386 3.74 163.3 27 67.0 8.5202 0.188 29.7466 3.74 163.1 26 68.0 8.5097 0.168 29.7537 3.72 162.5 27 69.0 8.5084 0.177 29.7615 3.72 162.4 26 70.0 8.5028 0.170 29.7674 3.72 162.4 26 71.0 8.4962 0.164 29.7737 3.72 162.3 27 72.0 8.4887 0.171 29.7803 3.72 162.3 27 73.0 8.4775 0.183 29.7894 3.72 162.2 27 74.0 8.4702 0.161 29.7967 3.71 162.0 23 75.0 8.4686 0.155 29.7982 3.71 161.8 27 76.0 8.4658 0.179 29.8013 3.71 161.8 26 77.0 8.4572 0.167 29.8093 3.71 161.8 27 78.0 8.4527 0.158 29.8118 3.70 161.6 26 79.0 8.4500 0.147 29.8143 3.70 161.5 27 80.0 8.4470 0.143 29.8188 3.70 161.4 26 81.0 8.4422 0.141 29.8239 3.70 161.4 26 82.0 8.4390 0.167 29.8271 3.69 161.2 26 83.0 8.4363 0.179 29.8293 3.69 161.2 28 84.0 8.4352 0.190 29.8300 3.69 161.2 26 85.0 8.4310 0.186 29.8328 3.69 161.1 20 86.0 8.4136 0.176 29.8441 3.69 161.1 26 87.0 8.4096 0.174 29.8468 3.69 161.2 26 88.0 8.4039 0.157 29.8504 3.70 161.3 26 89.0 8.3882 0.165 29.8607 3.69 161.2 28 90.0 8.3870 0.166 29.8613 3.69 161.1 26 91.0 8.3866 0.165 29.8615 3.69 161.0 26 92.0 8.3822 0.181 29.8643 3.70 161.3 26 93.0 8.3711 0.183 29.8685 3.70 161.3 21 94.0 8.3669 0.184 29.8701 3.69 161.1 27 95.0 8.3666 0.173 29.8703 3.69 160.9 26 96.0 8.3650 0.193 29.8714 3.69 161.2 26 97.0 8.3631 0.173 29.8730 3.70 161.3 25 98.0 8.3612 0.182 29.8745 3.70 161.3 26 99.0 8.3636 0.173 29.8735 3.69 161.1 26 100.0 8.3597 0.183 29.8757 3.69 160.9 25 101.0 8.3514 0.183 29.8809 3.69 161.0 26 102.0 8.3482 0.192 29.8830 3.69 161.1 26 103.0 8.3477 0.190 29.8836 3.69 161.1 26 104.0 8.3469 0.196 29.8842 3.69 161.0 20 105.0 8.3441 0.188 29.8865 3.68 160.6 27 106.0 8.3427 0.169 29.8877 3.68 160.6 23 107.0 8.3393 0.181 29.8908 3.67 160.3 27 108.0 8.3266 0.169 29.9022 3.68 160.4 26 109.0 8.3199 0.163 29.9081 3.67 160.3 26 110.0 8.3174 0.184 29.9101 3.67 160.1 27 111.0 8.3158 0.161 29.9113 3.68 160.5 34 112.0 8.3152 0.173 29.9120 3.68 160.5 32 113.0 8.3143 0.175 29.9127 3.68 160.5 33 114.0 8.3107 0.189 29.9159 3.67 160.3 34 115.0 8.3083 0.183 29.9178 3.68 160.5 34 116.0 8.3075 0.177 29.9186 3.68 160.5 34 117.0 8.3036 0.169 29.9219 3.68 160.6 69