*2013/12/16 15:38:26.48 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2012/06/27 00:06:53.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 108 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 521C624B NUMBER OF CHANNELS : 7 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 3.063 109.78 2 Temperature:Primary 'deg C (ITS90)' 8.0506 15.6916 3 Fluorescence:URU:Wetlabs mg/m^3 0.114 2.506 4 Salinity:T0:C0 PSS-78 21.54 30.2789 5 Oxygen:Dissolved:SBE mL/L 3.636 5.902 6 Oxygen:Dissolved:SBE umol/kg 158.5852 259.4638 7 Number_of_bin_records n/a 19 82 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 6 F ' ' 1 7 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2012-49\Pro $END *ADMINISTRATION MISSION : 2012-49 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : Strait of Georgia Juvenile Salmon Survey SCIENTIST : Neville C. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Strait of Georgia / Juan de Fuca Strait STATION : 65 EVENT NUMBER : 18 LATITUDE : 49 53.53000 N ! (deg min) LONGITUDE : 125 4.32000 W ! (deg min) WATER DEPTH : 120 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0443 $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.1.2 2012/10/25 14:38:10 9635 9635 CLEAN 5.0.4 2012/10/25 14:44:01 9635 9635 MERGEHDR 1.1 2012/10/25 15:27:31 9635 9635 SHIFTDAT 3.4 2012/10/25 15:45:56 9635 9635 SHIFTDAT 3.4 2012/11/01 13:13:51 9635 9635 SHIFTDAT 3.4 2012/11/01 13:17:06 9635 9635 DELETE 6.3 2012/11/01 13:40:42 9635 3014 CTDEDIT 4.61 2012/11/01 14:41:22 3014 2950 CALIB 11.7 2012/11/01 17:12:07 2950 2950 FILTERS 4.3 2012/11/01 17:14:13 2950 2950 BINAVE 4.1.1 2012/11/01 17:15:29 2950 108 REMOVECH 8.1.1 2012/11/01 17:16:32 108 108 CHGUNITS 3.0 2012/11/01 17:17:56 108 108 MERGEHDR 1.1 2012/11/01 17:26:26 108 108 REORDER 1.3 2012/11/01 17:27:56 ? ? HDREDIT2 2.5.1 2012/11/01 17:34:23 ? ? CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:38:26 108 108 $END $REMARKS -CLEAN functions: 2012/10/25 14:42:58 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:Wetlabs:ECO-AFL # of Records to Advance (-ve for Delay): At REC# 0 Shift= 12.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 100.60 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT 2012/11/01 14:41:22 64 records were deleted in this editing session. 7 changes in channel Salinity:T0:C0 -CALIB parameters: 2012/11/01 17:12:07 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2012-49\Processing\doc\2012-49-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 14 Oxygen:Dissolved:SBE mL/L 10 0.4800000E-01 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:Wetlabs:ECO-AFL Fluorescence:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2012/11/01 17:16:32 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] pH:SBE [pH Units] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2012/11/01 17:34:23 Applied edit header: P:\Cruise_Data_Processing\2012-49\Processing\doc\2012-49-HDR.TXT Channel 1: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: Salinity:Practical:T0:C0 [PSS-78] Name: Salinity:T0:C0 ==> Salinity:Practical:T0:C0 $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2012-03A\2012-03A-0018.hex Software Version Seasave V 7.21d Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jun 27 2012 00:05:03 NMEA Latitude = 49 53.53 N NMEA Longitude = 125 04.32 W NMEA UTC (Time) = Jun 27 2012 00:06:53 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2012-03 Station: Depth(m): System UTC = Jun 26 2012 23:05:03 # nquan = 15 # nvalues = 9635 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity, Practical [PSU] # name 12 = sal11: Salinity, Practical, 2 [PSU] # name 13 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 14 = flag: flag # span 0 = 1, 9635 # span 1 = 2.268, 110.601 # span 2 = 8.0503, 17.0370 # span 3 = 8.0507, 16.5057 # span 4 = 2.727464, 3.186832 # span 5 = 2.761642, 3.186822 # span 6 = 0.0163, 2.7147 # span 7 = 1.6484, 2.7082 # span 8 = 8.515, 9.279 # span 9 = -1.487, 1.408 # span 10 = 0, 1 # span 11 = 20.2245, 30.2805 # span 12 = 20.6991, 30.2799 # span 13 = 3.57596, 6.31061 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Jun 27 2012 00:06:53 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 63507 # 12-Apr-11 # -4.435468e+004 # -1.845750e-001 # 1.192740e-002 # 3.979900e-002 # 0.000000e+000 # 2.993572e+001 # -3.336200e-004 # 3.759160e-006 # 1.565300e-009 # 0.99986626 # 5.62145 # 0.000000e+000 # 1.283280e-002 # -9.295010e+000 # # # # # # 2710 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.36717391e-003 # 6.46683268e-004 # 2.34981097e-005 # 2.22352352e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2128 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.01926507e+001 # 1.46093888e+000 # -2.51557628e-003 # 2.74924248e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # 0692 # Dec 2010 # 4.6518 # 2.5397 # # # # # # # # # # # # # # # 0997 # 23-Apr-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.8010e-001 # -0.4816 # 1.4264e-003 # 2.8936e-005 # -9.0212e-007 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 1.5600 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2216 # June 2012 # 1.30000000e+001 # # 0.0427 # # # # datcnv_date = Oct 24 2012 16:48:25, 7.21d [datcnv_vars = 11] # datcnv_in = P:\Cruise_Data_Processing\2012-49\RAW\CTD\2012-49-0018.hex P:\Crui se_Data_Processing\2012-49\Processing\doc\2012-49-ctd-new.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = Oct 25 2012 07:35:53, 7.21d # wildedit_in = P:\Cruise_Data_Processing\2012-49\Processing\convert\2012-49-001 8.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Oct 25 2012 11:24:17, 7.21d # alignctd_in = P:\Cruise_Data_Processing\2012-49\Processing\wildedit\2012-49-00 18.cnv # alignctd_adv = sbeox0V 4.000 # celltm_date = Oct 25 2012 12:56:42, 7.21d # celltm_in = P:\Cruise_Data_Processing\2012-49\Processing\align\2012-49-0018.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 9.0000, 9.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Oct 25 2012 12:59:52, 7.21d [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2012-49\Processing\celltm\2012-49-0018.c nv P:\Cruise_Data_Processing\2012-57\Processing\doc\2012-57-ctd-new.xmlcon # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = yes # file_type = ascii END* CTDEDIT was used to remove records near the surface and bottom of the cast; salinity was cleaned lightly. Data Processing Notes: ---------------------------------------------------------------------- Fluorescence data are nominal and unedited, except that some records were removed in editing temperature and salinity. There was no calibration sampling for dissolved oxygen, but the results of cruise 2012-01 were used to derive DO concentration. A small correction was later added based on negative DO values found in the anoxic layer of Saanich Inlet. There was no calibration sampling for salinity, but the results of cruise 2012-01 in February 2012 suggest calibration drift is <0.001. The SBE pH sensor data has been removed from this file since there was no field calibration information available and there are concerns about how the sensor performs. For details on processing see processing report: 2012-49-proc.doc. ---------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.48E-01 1) $END !--1--- ---2---- ---3--- ---4---- --5--- --6-- -7-- !Pressu Temperat Fluores Salinity Oxygen Oxyge Numb !re ure: cence: :T0:C0 : n: er_o ! Primary URU: Dissol Disso ~bin ! Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- -------- ------ ----- ---- *END OF HEADER 3.1 15.6916 2.151 21.5400 5.90 259.5 21 4.0 15.4232 2.176 21.9092 5.47 240.3 50 4.8 14.7242 2.250 22.8675 5.57 244.7 28 6.0 13.6693 2.290 24.3545 5.49 240.8 29 7.0 13.9643 2.497 24.0239 5.17 226.9 29 8.0 13.6897 2.506 24.3918 5.00 219.3 27 9.0 13.0459 2.242 25.0432 4.91 215.0 26 10.0 12.6587 1.782 25.4673 4.72 206.9 27 11.0 12.3389 1.456 25.8140 4.60 201.6 26 12.0 11.8964 1.349 26.3088 4.56 199.6 27 13.0 11.2055 1.179 27.0836 4.55 198.9 25 14.0 10.9440 1.014 27.3672 4.53 197.9 24 15.0 10.7407 0.955 27.5649 4.52 197.6 25 16.0 10.5454 0.851 27.7372 4.51 197.2 25 17.0 10.4760 0.795 27.8116 4.47 195.4 24 18.0 10.4155 0.773 27.8610 4.42 193.1 25 19.0 10.3651 0.739 27.8946 4.37 191.2 25 20.0 10.2406 0.707 27.9760 4.36 190.7 24 21.0 10.1179 0.684 28.0499 4.36 190.3 22 22.0 10.1087 0.662 28.0572 4.33 189.3 26 23.0 10.0705 0.675 28.0976 4.30 188.1 23 24.0 9.9930 0.607 28.1996 4.26 186.2 25 25.0 9.9624 0.560 28.2421 4.21 184.0 25 26.0 9.8777 0.539 28.3428 4.18 182.6 25 27.0 9.7447 0.525 28.5058 4.16 181.7 25 28.0 9.6055 0.485 28.6646 4.17 182.1 26 29.0 9.5302 0.471 28.7422 4.19 182.9 25 30.0 9.4600 0.462 28.8338 4.19 182.9 25 31.0 9.4438 0.448 28.8820 4.18 182.7 25 32.0 9.4375 0.450 28.8925 4.18 182.5 25 33.0 9.4184 0.467 28.9194 4.16 181.5 23 34.0 9.3939 0.428 28.9501 4.14 180.6 26 35.0 9.3631 0.442 28.9849 4.10 179.2 25 36.0 9.3118 0.420 29.0364 4.07 177.8 24 37.0 9.2537 0.396 29.0919 4.06 177.1 25 38.0 9.1954 0.353 29.1574 4.05 176.6 25 39.0 9.1253 0.278 29.2332 4.04 176.2 24 40.0 9.0755 0.244 29.3082 4.03 175.8 26 41.0 9.0538 0.236 29.3394 4.02 175.4 25 42.0 9.0112 0.264 29.3808 3.99 174.2 25 43.0 8.9367 0.218 29.4539 3.96 173.0 26 44.0 8.8915 0.227 29.4899 3.95 172.5 25 45.0 8.7766 0.204 29.5839 3.95 172.6 25 46.0 8.6789 0.203 29.6680 3.96 172.9 25 47.0 8.6650 0.192 29.6806 3.96 173.0 23 48.0 8.6624 0.172 29.6834 3.97 173.2 24 49.0 8.6616 0.185 29.6850 3.96 172.8 24 50.0 8.6594 0.176 29.6877 3.95 172.5 25 51.0 8.6477 0.192 29.6983 3.95 172.5 24 52.0 8.6401 0.187 29.7050 3.95 172.6 26 53.0 8.6308 0.179 29.7117 3.96 172.7 22 54.0 8.6304 0.169 29.7124 3.95 172.3 24 55.0 8.6301 0.162 29.7130 3.94 172.2 25 56.0 8.6278 0.166 29.7147 3.94 172.1 25 57.0 8.6217 0.159 29.7186 3.93 171.7 24 58.0 8.6189 0.180 29.7203 3.91 170.4 24 59.0 8.6147 0.168 29.7236 3.87 168.9 25 60.0 8.5954 0.181 29.7388 3.85 167.8 23 61.0 8.5238 0.158 29.7985 3.84 167.4 22 62.0 8.4283 0.144 29.8726 3.84 167.7 23 63.0 8.4038 0.152 29.8901 3.84 167.6 22 64.0 8.4005 0.160 29.8927 3.83 167.0 23 65.0 8.3918 0.164 29.8997 3.81 166.0 23 66.0 8.3847 0.150 29.9058 3.78 165.0 22 67.0 8.3467 0.153 29.9382 3.75 163.8 24 68.0 8.2880 0.134 29.9891 3.73 162.9 23 69.0 8.2610 0.157 30.0127 3.71 162.1 22 70.0 8.2192 0.174 30.0502 3.70 161.6 23 71.0 8.1749 0.153 30.0893 3.70 161.5 24 72.0 8.1310 0.150 30.1341 3.70 161.6 19 73.0 8.1184 0.133 30.1473 3.70 161.6 23 74.0 8.1171 0.143 30.1492 3.71 161.7 25 75.0 8.1162 0.124 30.1508 3.70 161.4 23 76.0 8.1162 0.142 30.1517 3.69 161.0 25 77.0 8.1147 0.126 30.1564 3.68 160.6 24 78.0 8.1142 0.120 30.1596 3.67 160.3 24 79.0 8.0961 0.142 30.1842 3.67 160.1 24 80.0 8.0798 0.124 30.2047 3.67 160.2 25 81.0 8.0778 0.142 30.2075 3.67 160.2 25 82.0 8.0767 0.135 30.2091 3.67 160.1 24 83.0 8.0752 0.128 30.2107 3.67 160.1 26 84.0 8.0739 0.119 30.2128 3.67 160.0 20 85.0 8.0668 0.119 30.2209 3.67 160.1 25 86.0 8.0665 0.114 30.2228 3.67 160.0 26 87.0 8.0646 0.144 30.2273 3.67 159.9 25 88.0 8.0607 0.123 30.2358 3.66 159.6 26 89.0 8.0576 0.125 30.2427 3.66 159.7 26 90.0 8.0564 0.119 30.2456 3.66 159.5 26 91.0 8.0562 0.130 30.2473 3.65 159.3 25 92.0 8.0562 0.127 30.2491 3.65 159.4 28 93.0 8.0564 0.139 30.2500 3.65 159.3 27 94.0 8.0560 0.136 30.2525 3.65 159.1 26 95.0 8.0545 0.124 30.2559 3.65 159.2 27 96.0 8.0536 0.133 30.2589 3.65 159.2 27 97.0 8.0538 0.135 30.2591 3.64 158.9 24 98.0 8.0528 0.121 30.2634 3.64 159.0 25 99.0 8.0528 0.139 30.2670 3.65 159.1 30 100.0 8.0532 0.127 30.2695 3.65 159.1 29 101.0 8.0533 0.142 30.2700 3.64 158.8 30 102.0 8.0534 0.131 30.2703 3.64 158.9 30 103.0 8.0534 0.145 30.2714 3.64 158.9 30 104.0 8.0534 0.137 30.2735 3.64 158.8 37 105.0 8.0533 0.130 30.2737 3.64 158.9 49 106.0 8.0527 0.135 30.2750 3.64 158.6 74 107.0 8.0524 0.138 30.2750 3.64 158.7 82 108.0 8.0519 0.124 30.2754 3.64 158.8 54 109.0 8.0512 0.128 30.2765 3.64 158.6 52 109.8 8.0506 0.130 30.2789 3.64 158.8 25