*2013/12/16 15:38:25.89 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2012/06/23 13:57:27.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 83 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 35B5E80F NUMBER OF CHANNELS : 7 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 2.42 83.726 2 Temperature:Primary 'deg C (ITS90)' 8.4477 12.4317 3 Fluorescence:URU:Wetlabs mg/m^3 0.14 1.077 4 Salinity:T0:C0 PSS-78 14.3909 29.8836 5 Oxygen:Dissolved:SBE mL/L 4.305 5.64 6 Oxygen:Dissolved:SBE umol/kg 187.8483 249.1469 7 Number_of_bin_records n/a 1 43 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 6 F ' ' 1 7 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2012-49\Pro $END *ADMINISTRATION MISSION : 2012-49 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : Strait of Georgia Juvenile Salmon Survey SCIENTIST : Neville C. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Strait of Georgia / Juan de Fuca Strait STATION : 25 EVENT NUMBER : 8 LATITUDE : 48 56.87000 N ! (deg min) LONGITUDE : 123 25.79000 W ! (deg min) WATER DEPTH : 108 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0443 $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.1.2 2012/10/25 14:37:25 6813 6813 CLEAN 5.0.4 2012/10/25 14:43:14 6813 6813 MERGEHDR 1.1 2012/10/25 15:26:46 6813 6813 SHIFTDAT 3.4 2012/10/25 15:45:11 6813 6813 SHIFTDAT 3.4 2012/11/01 13:13:05 6813 6813 SHIFTDAT 3.4 2012/11/01 13:16:20 6813 6813 DELETE 6.3 2012/11/01 13:40:04 6813 2421 CTDEDIT 4.61 2012/11/01 14:09:06 2421 2421 CALIB 11.7 2012/11/01 17:11:47 2421 2421 FILTERS 4.3 2012/11/01 17:13:54 2421 2421 BINAVE 4.1.1 2012/11/01 17:15:18 2421 83 REMOVECH 8.1.1 2012/11/01 17:16:31 83 83 CHGUNITS 3.0 2012/11/01 17:17:56 83 83 MERGEHDR 1.1 2012/11/01 17:26:25 83 83 REORDER 1.3 2012/11/01 17:27:55 ? ? HDREDIT2 2.5.1 2012/11/01 17:34:23 ? ? CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:38:25 83 83 $END $REMARKS -CLEAN functions: 2012/10/25 14:42:58 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:Wetlabs:ECO-AFL # of Records to Advance (-ve for Delay): At REC# 0 Shift= 12.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 74.24 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT 2012/11/01 14:09:06 16 changes in channel Salinity:T0:C0 -CALIB parameters: 2012/11/01 17:11:47 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2012-49\Processing\doc\2012-49-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 14 Oxygen:Dissolved:SBE mL/L 10 0.4800000E-01 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:Wetlabs:ECO-AFL Fluorescence:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2012/11/01 17:16:31 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] pH:SBE [pH Units] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2012/11/01 17:34:23 Applied edit header: P:\Cruise_Data_Processing\2012-49\Processing\doc\2012-49-HDR.TXT Channel 1: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: Salinity:Practical:T0:C0 [PSS-78] Name: Salinity:T0:C0 ==> Salinity:Practical:T0:C0 $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2012-03A\2012-03A-0008.hex Software Version Seasave V 7.21d Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jun 23 2012 13:55:39 NMEA Latitude = 48 56.87 N NMEA Longitude = 123 25.79 W NMEA UTC (Time) = Jun 23 2012 13:57:27 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2012-03 Station: Depth(m): System UTC = Jun 23 2012 12:55:39 # nquan = 15 # nvalues = 6813 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity, Practical [PSU] # name 12 = sal11: Salinity, Practical, 2 [PSU] # name 13 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 14 = flag: flag # span 0 = 1, 6813 # span 1 = 0.969, 84.238 # span 2 = 8.4345, 12.4429 # span 3 = 8.4331, 12.4442 # span 4 = 1.789746, 3.215553 # span 5 = 1.786110, 3.215578 # span 6 = -0.0472, 19.0639 # span 7 = 1.8974, 2.5397 # span 8 = 8.153, 9.056 # span 9 = -1.348, 1.554 # span 10 = 0, 1 # span 11 = 14.2828, 29.8934 # span 12 = 14.2520, 29.8945 # span 13 = 4.25278, 6.53966 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Jun 23 2012 13:57:27 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 63507 # 12-Apr-11 # -4.435468e+004 # -1.845750e-001 # 1.192740e-002 # 3.979900e-002 # 0.000000e+000 # 2.993572e+001 # -3.336200e-004 # 3.759160e-006 # 1.565300e-009 # 0.99986626 # 5.62145 # 0.000000e+000 # 1.283280e-002 # -9.295010e+000 # # # # # # 2710 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.36717391e-003 # 6.46683268e-004 # 2.34981097e-005 # 2.22352352e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2128 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.01926507e+001 # 1.46093888e+000 # -2.51557628e-003 # 2.74924248e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # 0692 # Dec 2010 # 4.6518 # 2.5397 # # # # # # # # # # # # # # # 0997 # 23-Apr-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.8010e-001 # -0.4816 # 1.4264e-003 # 2.8936e-005 # -9.0212e-007 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 1.5600 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2216 # June 2012 # 1.30000000e+001 # # 0.0427 # # # # datcnv_date = Oct 24 2012 16:48:03, 7.21d [datcnv_vars = 11] # datcnv_in = P:\Cruise_Data_Processing\2012-49\RAW\CTD\2012-49-0008.hex P:\Crui se_Data_Processing\2012-49\Processing\doc\2012-49-ctd-new.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = Oct 25 2012 07:35:36, 7.21d # wildedit_in = P:\Cruise_Data_Processing\2012-49\Processing\convert\2012-49-000 8.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Oct 25 2012 11:23:59, 7.21d # alignctd_in = P:\Cruise_Data_Processing\2012-49\Processing\wildedit\2012-49-00 08.cnv # alignctd_adv = sbeox0V 4.000 # celltm_date = Oct 25 2012 12:56:24, 7.21d # celltm_in = P:\Cruise_Data_Processing\2012-49\Processing\align\2012-49-0008.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 9.0000, 9.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Oct 25 2012 12:59:38, 7.21d [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2012-49\Processing\celltm\2012-49-0008.c nv P:\Cruise_Data_Processing\2012-57\Processing\doc\2012-57-ctd-new.xmlcon # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = yes # file_type = ascii END* CTDEDIT was used to remove records near the surface; salinity was cleaned lightly. Data Processing Notes: ---------------------------------------------------------------------- Fluorescence data are nominal and unedited, except that some records were removed in editing temperature and salinity. There was no calibration sampling for dissolved oxygen, but the results of cruise 2012-01 were used to derive DO concentration. A small correction was later added based on negative DO values found in the anoxic layer of Saanich Inlet. There was no calibration sampling for salinity, but the results of cruise 2012-01 in February 2012 suggest calibration drift is <0.001. The SBE pH sensor data has been removed from this file since there was no field calibration information available and there are concerns about how the sensor performs. For details on processing see processing report: 2012-49-proc.doc. ---------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.48E-01 1) $END !--1--- ---2---- ---3--- ---4---- --5--- --6-- -7-- !Pressu Temperat Fluores Salinity Oxygen Oxyge Numb !re ure: cence: :T0:C0 : n: er_o ! Primary URU: Dissol Disso ~bin ! Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- -------- ------ ----- ---- *END OF HEADER 2.4 12.4304 1.048 14.4120 5.64 249.1 1 3.2 12.4317 1.077 14.3909 5.59 246.9 18 4.0 11.7413 0.780 21.8236 5.32 233.5 28 5.0 11.0882 0.571 26.2505 5.20 227.8 22 6.0 10.9137 0.518 26.8640 5.20 227.4 20 7.0 10.6649 0.440 27.7683 5.21 227.6 17 8.0 10.5425 0.417 27.8530 5.21 227.7 24 9.0 10.5351 0.409 27.8696 5.22 228.2 25 10.0 10.4985 0.416 27.9121 5.24 228.9 25 11.0 10.4977 0.383 27.9264 5.22 228.3 25 12.0 10.5081 0.411 27.9375 5.21 227.6 25 13.0 10.5191 0.390 27.9716 5.18 226.4 26 14.0 10.4800 0.383 28.1058 5.16 225.7 25 15.0 10.4552 0.356 28.1354 5.16 225.5 25 16.0 10.3723 0.333 28.2186 5.16 225.3 27 17.0 10.3559 0.340 28.2547 5.13 224.0 26 18.0 10.3470 0.328 28.2709 5.10 222.9 26 19.0 10.3148 0.341 28.3241 5.08 222.0 26 20.0 10.2038 0.328 28.4628 5.08 221.9 26 21.0 10.1527 0.334 28.5292 5.09 222.2 27 22.0 10.1361 0.323 28.5628 5.09 222.4 26 23.0 10.1265 0.327 28.5824 5.09 222.1 26 24.0 10.1159 0.321 28.6069 5.10 222.8 27 25.0 10.1069 0.304 28.6164 5.12 223.5 28 26.0 10.0862 0.271 28.6637 5.12 223.6 25 27.0 10.1221 0.264 28.7000 5.08 222.0 27 28.0 10.1534 0.245 28.7398 5.05 220.5 29 29.0 10.0985 0.254 28.7712 5.03 219.9 28 30.0 10.0297 0.230 28.7823 5.03 219.5 28 31.0 9.9839 0.247 28.7907 5.01 218.9 29 32.0 9.9886 0.244 28.8816 4.98 217.5 29 33.0 9.9597 0.228 28.9307 4.94 215.9 28 34.0 9.8938 0.236 28.9508 4.93 215.2 29 35.0 9.8242 0.241 28.9704 4.87 212.6 29 36.0 9.7964 0.225 28.9943 4.75 207.3 28 37.0 9.7493 0.229 29.0088 4.68 204.6 30 38.0 9.7137 0.287 29.0703 4.69 204.7 30 39.0 9.6697 0.254 29.1088 4.68 204.5 30 40.0 9.6561 0.248 29.1269 4.68 204.1 31 41.1 9.6334 0.266 29.1402 4.66 203.5 43 42.0 9.6183 0.264 29.1424 4.62 201.9 37 43.0 9.5843 0.239 29.1433 4.61 201.1 36 44.0 9.5669 0.208 29.1468 4.61 201.1 33 45.0 9.5350 0.230 29.1713 4.61 201.2 35 46.0 9.5169 0.219 29.1841 4.61 201.3 33 47.0 9.4980 0.234 29.2013 4.59 200.4 33 48.0 9.4842 0.238 29.2080 4.58 199.9 30 49.0 9.4484 0.222 29.2258 4.55 198.5 34 50.0 9.3858 0.202 29.2433 4.51 196.9 32 51.0 9.3137 0.196 29.2794 4.49 195.9 31 52.0 9.2854 0.192 29.2957 4.48 195.8 32 53.0 9.2203 0.177 29.3274 4.49 196.0 30 54.0 9.1925 0.158 29.3319 4.49 196.0 31 55.0 9.1385 0.165 29.3350 4.49 196.1 31 56.0 9.0729 0.165 29.3390 4.50 196.3 29 57.0 9.0513 0.163 29.3418 4.48 195.7 32 58.0 9.0351 0.162 29.3417 4.45 194.2 31 59.0 9.0113 0.164 29.3462 4.43 193.2 26 60.0 8.9069 0.153 29.3902 4.40 192.1 32 61.0 8.8026 0.152 29.4447 4.39 191.7 32 62.0 8.6684 0.145 29.4954 4.41 192.4 31 63.0 8.5869 0.150 29.5330 4.42 192.7 31 64.0 8.5277 0.145 29.5611 4.42 193.0 31 65.0 8.4802 0.140 29.5827 4.43 193.5 31 66.0 8.4595 0.150 29.5880 4.43 193.2 31 67.0 8.4477 0.148 29.5977 4.42 192.8 32 68.0 8.5094 0.150 29.6424 4.40 191.8 31 69.0 8.5357 0.151 29.6697 4.40 191.8 31 70.0 8.5364 0.178 29.6870 4.42 192.7 31 71.0 8.4878 0.151 29.6925 4.42 192.8 30 72.0 8.4827 0.145 29.6951 4.43 193.1 31 73.0 8.5665 0.150 29.7183 4.42 192.9 30 74.0 8.5903 0.152 29.7237 4.39 191.5 31 75.0 8.7176 0.167 29.7625 4.37 190.8 32 76.0 8.7740 0.161 29.7837 4.38 191.0 32 77.0 8.7633 0.171 29.7853 4.37 190.6 31 78.0 8.8426 0.182 29.8245 4.34 189.2 31 79.0 8.8970 0.210 29.8442 4.30 187.8 31 80.0 8.9020 0.182 29.8598 4.32 188.6 32 81.0 8.7915 0.186 29.8518 4.36 190.3 31 82.0 8.6711 0.181 29.8435 4.38 191.2 34 83.0 8.6240 0.172 29.8534 4.39 191.5 37 83.7 8.6130 0.160 29.8836 4.39 191.6 24