*2013/12/16 15:38:25.86 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2012/06/23 01:05:12.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 98 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 434D9959 NUMBER OF CHANNELS : 7 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 3.303 100.015 2 Temperature:Primary 'deg C (ITS90)' 8.4014 12.3132 3 Fluorescence:URU:Wetlabs mg/m^3 0.134 1.38 4 Salinity:T0:C0 PSS-78 17.2315 30.167 5 Oxygen:Dissolved:SBE mL/L 4.154 5.519 6 Oxygen:Dissolved:SBE umol/kg 181.2182 243.2739 7 Number_of_bin_records n/a 16 37 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 6 F ' ' 1 7 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2012-49\Pro $END *ADMINISTRATION MISSION : 2012-49 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : Strait of Georgia Juvenile Salmon Survey SCIENTIST : Neville C. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Strait of Georgia / Juan de Fuca Strait STATION : 24 EVENT NUMBER : 7 LATITUDE : 48 54.32000 N ! (deg min) LONGITUDE : 123 11.04000 W ! (deg min) WATER DEPTH : 128 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0443 $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.1.2 2012/10/25 14:37:23 8499 8499 CLEAN 5.0.4 2012/10/25 14:43:12 8499 8499 MERGEHDR 1.1 2012/10/25 15:26:43 8499 8499 SHIFTDAT 3.4 2012/10/25 15:45:09 8499 8499 SHIFTDAT 3.4 2012/11/01 13:13:03 8499 8499 SHIFTDAT 3.4 2012/11/01 13:16:17 8499 8499 DELETE 6.3 2012/11/01 13:40:02 8499 2598 CTDEDIT 4.61 2012/11/01 14:06:53 2598 2486 CALIB 11.7 2012/11/01 17:11:46 2486 2486 FILTERS 4.3 2012/11/01 17:13:53 2486 2486 BINAVE 4.1.1 2012/11/01 17:15:18 2486 98 REMOVECH 8.1.1 2012/11/01 17:16:31 98 98 CHGUNITS 3.0 2012/11/01 17:17:56 98 98 MERGEHDR 1.1 2012/11/01 17:26:25 98 98 REORDER 1.3 2012/11/01 17:27:55 ? ? HDREDIT2 2.5.1 2012/11/01 17:34:23 ? ? CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:38:25 98 98 $END $REMARKS -CLEAN functions: 2012/10/25 14:42:58 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:Wetlabs:ECO-AFL # of Records to Advance (-ve for Delay): At REC# 0 Shift= 12.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 90.79 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT 2012/11/01 14:06:53 112 records were deleted in this editing session. No data values were changed. -CALIB parameters: 2012/11/01 17:11:46 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2012-49\Processing\doc\2012-49-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 14 Oxygen:Dissolved:SBE mL/L 10 0.4800000E-01 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:Wetlabs:ECO-AFL Fluorescence:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2012/11/01 17:16:31 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] pH:SBE [pH Units] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2012/11/01 17:34:23 Applied edit header: P:\Cruise_Data_Processing\2012-49\Processing\doc\2012-49-HDR.TXT Channel 1: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: Salinity:Practical:T0:C0 [PSS-78] Name: Salinity:T0:C0 ==> Salinity:Practical:T0:C0 $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2012-03A\2012-03A-0007.hex Software Version Seasave V 7.21d Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jun 23 2012 01:03:25 NMEA Latitude = 48 54.32 N NMEA Longitude = 123 11.04 W NMEA UTC (Time) = Jun 23 2012 01:05:12 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2012-03 Station: Depth(m): System UTC = Jun 23 2012 00:03:25 # nquan = 15 # nvalues = 8499 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity, Practical [PSU] # name 12 = sal11: Salinity, Practical, 2 [PSU] # name 13 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 14 = flag: flag # span 0 = 1, 8499 # span 1 = 0.579, 100.793 # span 2 = 8.3675, 13.6328 # span 3 = 8.3693, 13.7215 # span 4 = 0.024140, 3.250997 # span 5 = 0.004587, 3.251014 # span 6 = -0.1107, 20.1116 # span 7 = 1.8449, 2.5568 # span 8 = 4.879, 9.011 # span 9 = -2.538, 2.398 # span 10 = 0, 1 # span 11 = 0.1485, 30.1736 # span 12 = 0.0304, 30.1734 # span 13 = 4.10152, 6.74349 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Jun 23 2012 01:05:12 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 63507 # 12-Apr-11 # -4.435468e+004 # -1.845750e-001 # 1.192740e-002 # 3.979900e-002 # 0.000000e+000 # 2.993572e+001 # -3.336200e-004 # 3.759160e-006 # 1.565300e-009 # 0.99986626 # 5.62145 # 0.000000e+000 # 1.283280e-002 # -9.295010e+000 # # # # # # 2710 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.36717391e-003 # 6.46683268e-004 # 2.34981097e-005 # 2.22352352e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2128 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.01926507e+001 # 1.46093888e+000 # -2.51557628e-003 # 2.74924248e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # 0692 # Dec 2010 # 4.6518 # 2.5397 # # # # # # # # # # # # # # # 0997 # 23-Apr-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.8010e-001 # -0.4816 # 1.4264e-003 # 2.8936e-005 # -9.0212e-007 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 1.5600 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2216 # June 2012 # 1.30000000e+001 # # 0.0427 # # # # datcnv_date = Oct 24 2012 16:48:01, 7.21d [datcnv_vars = 11] # datcnv_in = P:\Cruise_Data_Processing\2012-49\RAW\CTD\2012-49-0007.hex P:\Crui se_Data_Processing\2012-49\Processing\doc\2012-49-ctd-new.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = Oct 25 2012 07:35:35, 7.21d # wildedit_in = P:\Cruise_Data_Processing\2012-49\Processing\convert\2012-49-000 7.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Oct 25 2012 11:23:58, 7.21d # alignctd_in = P:\Cruise_Data_Processing\2012-49\Processing\wildedit\2012-49-00 07.cnv # alignctd_adv = sbeox0V 4.000 # celltm_date = Oct 25 2012 12:56:23, 7.21d # celltm_in = P:\Cruise_Data_Processing\2012-49\Processing\align\2012-49-0007.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 9.0000, 9.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Oct 25 2012 12:59:37, 7.21d [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2012-49\Processing\celltm\2012-49-0007.c nv P:\Cruise_Data_Processing\2012-57\Processing\doc\2012-57-ctd-new.xmlcon # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = yes # file_type = ascii END* CTDEDIT was used to remove records near the surface and at the bottom of the cast. Data Processing Notes: ---------------------------------------------------------------------- Fluorescence data are nominal and unedited, except that some records were removed in editing temperature and salinity. There was no calibration sampling for dissolved oxygen, but the results of cruise 2012-01 were used to derive DO concentration. A small correction was later added based on negative DO values found in the anoxic layer of Saanich Inlet. There was no calibration sampling for salinity, but the results of cruise 2012-01 in February 2012 suggest calibration drift is <0.001. The SBE pH sensor data has been removed from this file since there was no field calibration information available and there are concerns about how the sensor performs. For details on processing see processing report: 2012-49-proc.doc. ---------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.48E-01 1) $END !--1--- ---2---- ---3--- ---4---- --5--- --6-- -7-- !Pressu Temperat Fluores Salinity Oxygen Oxyge Numb !re ure: cence: :T0:C0 : n: er_o ! Primary URU: Dissol Disso ~bin ! Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- -------- ------ ----- ---- *END OF HEADER 3.3 12.3132 1.380 17.2315 5.52 243.3 16 4.0 11.0750 0.805 23.8338 5.40 236.7 37 5.0 10.9800 0.690 24.4252 5.24 229.7 33 6.0 10.8915 0.688 25.2561 5.05 221.3 27 7.0 10.4980 0.591 26.8467 4.88 213.4 27 8.0 10.2485 0.496 27.5589 4.81 210.4 27 9.0 9.8966 0.417 28.2466 4.76 208.2 27 10.0 9.4259 0.290 28.7034 4.70 205.2 26 11.0 9.3656 0.272 28.9394 4.67 203.8 26 12.0 9.3997 0.274 29.0379 4.66 203.3 27 13.0 9.3835 0.265 29.0649 4.64 202.8 26 14.0 9.3730 0.268 29.0899 4.62 201.7 26 15.0 9.3682 0.243 29.1023 4.59 200.3 26 16.0 9.3425 0.259 29.1458 4.55 198.6 27 17.0 9.3039 0.248 29.1901 4.49 195.9 26 18.0 9.2137 0.228 29.2525 4.45 194.4 27 19.0 9.1333 0.246 29.3220 4.45 194.0 25 20.0 8.9929 0.221 29.3847 4.45 194.4 25 21.0 8.9505 0.200 29.3997 4.45 194.4 24 22.0 8.9154 0.209 29.4163 4.45 194.2 25 23.0 8.8863 0.201 29.4411 4.44 193.7 26 24.0 8.8627 0.200 29.4589 4.43 193.3 25 25.0 8.8360 0.209 29.4799 4.41 192.5 25 26.0 8.7855 0.206 29.5091 4.40 192.0 26 27.0 8.7600 0.220 29.5208 4.39 191.7 25 28.0 8.7181 0.200 29.5385 4.38 191.2 24 29.0 8.6954 0.210 29.5491 4.38 191.0 25 30.0 8.6800 0.173 29.5556 4.37 190.9 24 31.0 8.6582 0.193 29.5685 4.37 190.6 25 32.0 8.6449 0.179 29.5815 4.36 190.4 26 33.0 8.6341 0.160 29.5939 4.36 190.5 25 34.0 8.6343 0.190 29.6001 4.36 190.1 25 35.0 8.6333 0.162 29.6153 4.35 189.8 25 36.0 8.6331 0.166 29.6225 4.34 189.6 26 37.0 8.6282 0.169 29.6273 4.35 189.7 24 38.0 8.6177 0.190 29.6400 4.35 189.7 26 39.0 8.6065 0.160 29.6450 4.34 189.4 25 40.0 8.6118 0.175 29.6523 4.34 189.2 25 41.0 8.6088 0.185 29.6696 4.34 189.2 25 42.0 8.6208 0.187 29.7027 4.33 188.8 26 43.0 8.6287 0.183 29.7104 4.31 188.3 26 44.0 8.6428 0.173 29.7223 4.31 188.2 24 45.0 8.6500 0.173 29.7477 4.31 187.9 24 46.0 8.6271 0.170 29.7548 4.31 188.1 24 47.0 8.6117 0.172 29.7537 4.31 187.9 24 48.0 8.5797 0.152 29.7527 4.31 188.2 26 49.0 8.5760 0.166 29.7640 4.32 188.3 25 50.0 8.5815 0.143 29.7695 4.31 188.2 24 51.0 8.6041 0.150 29.7823 4.31 188.0 24 52.0 8.6099 0.155 29.7988 4.31 188.0 25 53.0 8.6009 0.160 29.8043 4.32 188.4 24 54.0 8.5901 0.171 29.8105 4.32 188.3 25 55.0 8.5611 0.162 29.8152 4.30 187.8 24 56.0 8.5579 0.165 29.8177 4.30 187.8 25 57.0 8.5530 0.169 29.8242 4.32 188.3 25 58.0 8.5107 0.158 29.8222 4.33 189.1 25 59.0 8.4491 0.134 29.8168 4.35 189.7 23 60.0 8.4311 0.142 29.8192 4.35 189.6 25 61.0 8.4349 0.160 29.8268 4.34 189.5 24 62.0 8.4337 0.151 29.8293 4.34 189.3 24 63.0 8.4340 0.161 29.8309 4.34 189.4 25 64.0 8.4347 0.140 29.8328 4.34 189.5 24 65.0 8.4324 0.138 29.8351 4.35 189.9 25 66.0 8.4235 0.158 29.8360 4.35 189.8 24 67.0 8.4064 0.155 29.8385 4.35 189.9 25 68.0 8.4127 0.148 29.8568 4.35 189.7 24 69.0 8.4210 0.163 29.8763 4.34 189.5 25 70.0 8.4279 0.156 29.8811 4.34 189.3 24 71.0 8.4308 0.146 29.8826 4.34 189.5 23 72.0 8.4404 0.158 29.8874 4.36 190.3 25 73.0 8.4353 0.155 29.8964 4.36 190.0 25 74.0 8.4014 0.166 29.9064 4.35 190.0 24 75.0 8.4902 0.147 29.9341 4.34 189.3 24 76.0 8.5517 0.154 29.9490 4.33 188.8 25 77.0 8.5946 0.180 29.9589 4.33 188.9 24 78.0 8.6743 0.185 29.9782 4.30 187.5 25 79.0 8.7423 0.192 29.9938 4.25 185.4 25 80.0 8.8894 0.174 30.0312 4.22 183.9 24 81.0 9.0080 0.237 30.0644 4.20 183.0 26 82.0 9.0117 0.279 30.0766 4.20 183.1 25 83.0 9.0087 0.292 30.0892 4.19 183.0 25 84.0 9.0051 0.303 30.0995 4.19 182.9 26 85.0 9.0038 0.305 30.1027 4.19 182.8 26 86.0 9.0018 0.314 30.1059 4.19 182.7 25 87.0 9.0010 0.323 30.1063 4.19 182.8 26 88.0 8.9993 0.298 30.1075 4.19 182.7 26 89.0 8.9979 0.325 30.1098 4.18 182.5 24 90.0 8.9956 0.293 30.1173 4.19 182.7 25 91.0 8.9951 0.330 30.1193 4.18 182.5 25 92.0 8.9925 0.292 30.1222 4.18 182.4 25 93.0 8.9911 0.312 30.1242 4.18 182.1 26 94.0 8.9890 0.293 30.1272 4.18 182.2 25 95.0 8.9858 0.338 30.1319 4.17 182.1 26 96.0 8.9840 0.307 30.1345 4.17 181.9 27 97.0 8.9803 0.300 30.1413 4.17 181.9 29 98.0 8.9763 0.318 30.1493 4.16 181.6 28 99.0 8.9723 0.310 30.1559 4.15 181.2 28 100.0 8.9652 0.289 30.1670 4.16 181.4 29