*2013/12/16 15:38:25.79 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2012/06/22 14:04:30.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 57 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : C0F98894 NUMBER OF CHANNELS : 7 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 3.432 58.849 2 Temperature:Primary 'deg C (ITS90)' 9.0423 11.3128 3 Fluorescence:URU:Wetlabs mg/m^3 0.42 3.656 4 Salinity:T0:C0 PSS-78 28.6369 30.0768 5 Oxygen:Dissolved:SBE mL/L 4.159 6.027 6 Oxygen:Dissolved:SBE umol/kg 181.4546 263.329 7 Number_of_bin_records n/a 8 64 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 6 F ' ' 1 7 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2012-49\Pro $END *ADMINISTRATION MISSION : 2012-49 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : Strait of Georgia Juvenile Salmon Survey SCIENTIST : Neville C. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Strait of Georgia / Juan de Fuca Strait STATION : 16 EVENT NUMBER : 5 LATITUDE : 48 42.54000 N ! (deg min) LONGITUDE : 123 29.78000 W ! (deg min) WATER DEPTH : 76 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0443 $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.1.2 2012/10/25 14:37:18 5784 5784 CLEAN 5.0.4 2012/10/25 14:43:07 5784 5784 MERGEHDR 1.1 2012/10/25 15:26:39 5784 5784 SHIFTDAT 3.4 2012/10/25 15:45:05 5784 5784 SHIFTDAT 3.4 2012/11/01 13:12:58 5784 5784 SHIFTDAT 3.4 2012/11/01 13:16:13 5784 5784 DELETE 6.3 2012/11/01 13:39:58 5784 1763 CTDEDIT 4.61 2012/11/01 14:00:00 1763 1630 CALIB 11.7 2012/11/01 17:11:45 1630 1630 FILTERS 4.3 2012/11/01 17:13:51 1630 1630 BINAVE 4.1.1 2012/11/01 17:15:17 1630 57 REMOVECH 8.1.1 2012/11/01 17:16:31 57 57 CHGUNITS 3.0 2012/11/01 17:17:56 57 57 MERGEHDR 1.1 2012/11/01 17:26:25 57 57 REORDER 1.3 2012/11/01 17:27:55 ? ? HDREDIT2 2.5.1 2012/11/01 17:34:22 ? ? CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:38:25 57 57 $END $REMARKS -CLEAN functions: 2012/10/25 14:42:58 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:Wetlabs:ECO-AFL # of Records to Advance (-ve for Delay): At REC# 0 Shift= 12.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 49.19 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT 2012/11/01 14:00:00 133 records were deleted in this editing session. No data values were changed. -CALIB parameters: 2012/11/01 17:11:45 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2012-49\Processing\doc\2012-49-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 14 Oxygen:Dissolved:SBE mL/L 10 0.4800000E-01 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:Wetlabs:ECO-AFL Fluorescence:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2012/11/01 17:16:31 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] pH:SBE [pH Units] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2012/11/01 17:34:22 Applied edit header: P:\Cruise_Data_Processing\2012-49\Processing\doc\2012-49-HDR.TXT Channel 1: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: Salinity:Practical:T0:C0 [PSS-78] Name: Salinity:T0:C0 ==> Salinity:Practical:T0:C0 $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2012-03A\2012-03A-0005.hex Software Version Seasave V 7.21d Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Jun 22 2012 14:02:43 NMEA Latitude = 48 42.54 N NMEA Longitude = 123 29.78 W NMEA UTC (Time) = Jun 22 2012 14:04:30 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2012-03 Station: Patricia Bay Test Depth(m): 30 System UTC = Jun 22 2012 13:02:43 # nquan = 15 # nvalues = 5784 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity, Practical [PSU] # name 12 = sal11: Salinity, Practical, 2 [PSU] # name 13 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 14 = flag: flag # span 0 = 1, 5784 # span 1 = 1.381, 59.191 # span 2 = 9.0394, 12.4686 # span 3 = 9.0395, 12.4851 # span 4 = 0.039036, 3.364857 # span 5 = 0.012651, 3.379135 # span 6 = -0.2535, 9.1751 # span 7 = 1.8535, 2.7521 # span 8 = 4.772, 9.168 # span 9 = -1.270, 1.137 # span 10 = 0, 1 # span 11 = 0.2521, 30.0827 # span 12 = 0.0814, 30.0829 # span 13 = 4.10557, 7.36127 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Jun 22 2012 14:04:30 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 63507 # 12-Apr-11 # -4.435468e+004 # -1.845750e-001 # 1.192740e-002 # 3.979900e-002 # 0.000000e+000 # 2.993572e+001 # -3.336200e-004 # 3.759160e-006 # 1.565300e-009 # 0.99986626 # 5.62145 # 0.000000e+000 # 1.283280e-002 # -9.295010e+000 # # # # # # 2710 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.36717391e-003 # 6.46683268e-004 # 2.34981097e-005 # 2.22352352e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2128 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.01926507e+001 # 1.46093888e+000 # -2.51557628e-003 # 2.74924248e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # 0692 # Dec 2010 # 4.6518 # 2.5397 # # # # # # # # # # # # # # # 0997 # 23-Apr-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.8010e-001 # -0.4816 # 1.4264e-003 # 2.8936e-005 # -9.0212e-007 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 1.5600 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2216 # June 2012 # 1.30000000e+001 # # 0.0427 # # # # datcnv_date = Oct 24 2012 16:47:59, 7.21d [datcnv_vars = 11] # datcnv_in = P:\Cruise_Data_Processing\2012-49\RAW\CTD\2012-49-0005.hex P:\Crui se_Data_Processing\2012-49\Processing\doc\2012-49-ctd-new.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = Oct 25 2012 07:35:33, 7.21d # wildedit_in = P:\Cruise_Data_Processing\2012-49\Processing\convert\2012-49-000 5.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Oct 25 2012 11:23:57, 7.21d # alignctd_in = P:\Cruise_Data_Processing\2012-49\Processing\wildedit\2012-49-00 05.cnv # alignctd_adv = sbeox0V 4.000 # celltm_date = Oct 25 2012 12:56:22, 7.21d # celltm_in = P:\Cruise_Data_Processing\2012-49\Processing\align\2012-49-0005.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 9.0000, 9.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Oct 25 2012 12:59:35, 7.21d [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2012-49\Processing\celltm\2012-49-0005.c nv P:\Cruise_Data_Processing\2012-57\Processing\doc\2012-57-ctd-new.xmlcon # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = yes # file_type = ascii END* CTDEDIT was used to remove some records near the surface of the cast. Data Processing Notes: ---------------------------------------------------------------------- Fluorescence data are nominal and unedited, except that some records were removed in editing temperature and salinity. There was no calibration sampling for dissolved oxygen, but the results of cruise 2012-01 were used to derive DO concentration. A small correction was later added based on negative DO values found in the anoxic layer of Saanich Inlet. There was no calibration sampling for salinity, but the results of cruise 2012-01 in February 2012 suggest calibration drift is <0.001. The SBE pH sensor data has been removed from this file since there was no field calibration information available and there are concerns about how the sensor performs. For details on processing see processing report: 2012-49-proc.doc. ---------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.48E-01 1) $END !--1--- ---2---- ---3--- ---4---- --5--- --6-- -7-- !Pressu Temperat Fluores Salinity Oxygen Oxyge Numb !re ure: cence: :T0:C0 : n: er_o ! Primary URU: Dissol Disso ~bin ! Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- -------- ------ ----- ---- *END OF HEADER 3.4 11.3128 3.368 28.6369 6.03 263.3 8 3.9 11.2933 3.506 28.6380 6.00 262.1 64 4.7 11.2041 3.459 28.6512 5.74 250.9 20 6.0 10.9903 3.656 28.6862 5.33 232.9 32 7.0 10.6466 3.013 28.7572 5.26 229.6 35 8.0 10.3789 2.767 28.8176 5.28 230.7 33 9.0 10.3564 2.273 28.8188 5.26 229.7 33 10.0 10.3495 2.357 28.8198 5.21 227.7 30 11.0 10.2975 2.334 28.8623 5.18 226.3 30 12.0 10.2620 2.268 28.8927 5.18 226.1 25 13.0 10.2343 2.278 28.9444 5.16 225.1 28 14.0 10.2411 2.436 28.9418 5.11 223.2 28 15.0 10.2167 2.318 28.9757 5.08 221.9 27 16.0 10.1924 2.294 29.0104 5.06 221.1 26 17.0 10.1877 1.587 29.0208 5.05 220.5 28 18.0 10.1832 1.654 29.0361 5.03 219.9 24 19.0 10.1792 1.526 29.0399 5.02 219.2 26 20.0 10.1749 1.459 29.0429 4.97 217.0 30 21.0 10.1649 1.656 29.0495 4.89 213.4 27 22.0 10.1343 1.366 29.0725 4.81 210.0 29 23.0 10.0444 1.128 29.1225 4.75 207.6 27 24.0 9.9649 1.117 29.1746 4.71 205.7 28 25.0 9.9194 1.068 29.2055 4.66 203.7 29 26.0 9.8869 0.946 29.2279 4.61 201.4 29 27.0 9.8315 0.898 29.2677 4.58 199.8 27 28.0 9.7744 0.758 29.3033 4.55 198.8 29 29.0 9.7087 0.678 29.3503 4.55 198.4 28 30.0 9.6503 0.625 29.3987 4.54 198.0 27 31.0 9.6242 0.650 29.4281 4.51 196.9 28 32.0 9.5991 0.662 29.4528 4.48 195.7 27 33.0 9.5620 0.592 29.4859 4.47 195.2 27 34.0 9.5217 0.555 29.5179 4.47 195.0 28 35.0 9.5129 0.529 29.5252 4.46 194.6 23 36.0 9.4974 0.553 29.5462 4.45 194.1 25 37.0 9.4884 0.518 29.5581 4.44 193.7 27 38.0 9.4756 0.548 29.5727 4.41 192.6 27 39.0 9.4619 0.509 29.5863 4.41 192.3 27 40.0 9.4228 0.504 29.6120 4.42 193.0 27 41.0 9.3406 0.476 29.6366 4.43 193.3 28 42.0 9.2857 0.469 29.6565 4.43 193.3 27 43.0 9.2884 0.483 29.6687 4.42 192.9 27 44.0 9.2816 0.470 29.6762 4.41 192.4 28 45.0 9.2720 0.484 29.6862 4.41 192.6 25 46.0 9.2579 0.473 29.6962 4.41 192.4 27 47.0 9.2543 0.459 29.7009 4.40 191.9 26 48.0 9.2548 0.475 29.7073 4.39 191.8 28 49.0 9.2466 0.467 29.7169 4.39 191.5 30 50.0 9.2440 0.463 29.7271 4.36 190.5 29 51.0 9.2424 0.509 29.7511 4.34 189.3 29 52.0 9.2056 0.505 29.8031 4.30 187.6 30 53.0 9.1872 0.527 29.8235 4.27 186.2 29 54.0 9.1630 0.469 29.8659 4.25 185.3 28 55.0 9.1242 0.437 29.8914 4.22 184.3 29 56.0 9.1048 0.446 29.9315 4.19 182.7 29 57.0 9.0800 0.432 29.9806 4.17 181.8 30 58.0 9.0587 0.420 30.0411 4.16 181.5 34 58.8 9.0423 0.422 30.0768 4.16 181.7 26