*2013/12/16 15:38:21.01 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2012/08/26 07:57:04.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 98 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 6690BC50 NUMBER OF CHANNELS : 7 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 3.97 100.708 2 Temperature:Primary 'deg C (ITS90)' 7.3322 15.0994 3 Fluorescence:URU:Wetlabs mg/m^3 0.24E-01 3.92 4 Salinity:T0:C0 PSS-78 30.9295 32.8597 5 Oxygen:Dissolved:SBE mL/L 4.478 6.295 6 Oxygen:Dissolved:SBE umol/kg 194.904 274.6507 7 Number_of_bin_records n/a 14 45 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 6 F ' ' 1 7 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2012-30\Pro $END *ADMINISTRATION MISSION : 2012-30 AGENCY : 'PBS, Marine Ecosystems and Aquaculture Division,' CONTINUED : ' Nanaimo, B.C.' COUNTRY : Canada PROJECT : Pacific Hake Stock Assessment SCIENTIST : Grandin C. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Queen Charlotte Sound STATION : QCS3 EVENT NUMBER : 14 LATITUDE : 52 2.99000 N ! (deg min) LONGITUDE : 129 43.85000 W ! (deg min) WATER DEPTH : 109 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0443 $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.1.2 2012/11/05 10:53:01 6592 6592 CLEAN 5.0.4 2012/11/05 11:07:04 6592 6592 SHIFTDAT 3.4 2012/11/05 11:24:09 6592 6592 SHIFTDAT 3.4 2012/11/05 11:24:56 6592 6592 SHIFTDAT 3.4 2012/11/05 11:25:57 6592 6592 SHIFTDAT 3.4 2012/11/05 11:26:44 6592 6592 DELETE 6.3 2012/11/05 11:47:57 6592 2904 CTDEDIT 4.61 2012/11/05 15:20:37 2904 2799 CALIB 11.7 2012/11/05 15:32:20 2799 2799 FILTERS 4.3 2012/11/05 15:32:44 2799 2799 BINAVE 4.1.1 2012/11/05 15:32:59 2799 98 REMOVECH 8.1.1 2012/11/05 15:35:52 98 98 CHGUNITS 3.0 2012/11/05 15:36:34 98 98 REORDER 1.3 2012/11/05 15:37:11 ? ? HDREDIT2 2.5.1 2012/11/05 15:37:35 ? ? CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:38:21 98 98 $END $REMARKS -CLEAN functions: 2012/11/05 11:07:01 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:Wetlabs:ECO-AFL # of Records to Advance (-ve for Delay): At REC# 0 Shift= 12.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: pH:SBE # of Records to Advance (-ve for Delay): At REC# 0 Shift= 48.00 -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 91.26 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT 2012/11/05 15:20:37 105 records were deleted in this editing session. 11 changes in channel Salinity:T0:C0 -CALIB parameters: 2012/11/05 15:32:20 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2012-30\Processing\doc\2012-30-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 14 Oxygen:Dissolved:SBE mL/L 10 0.4800000E-01 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:Wetlabs:ECO-AFL Fluorescence:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2012/11/05 15:35:52 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] pH:SBE [pH Units] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2012/11/05 15:37:35 Applied edit header: P:\Cruise_Data_Processing\2012-30\Processing\doc\2012-30-HDR.TXT Channel 1: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: Salinity:Practical:T0:C0 [PSS-78] Name: Salinity:T0:C0 ==> Salinity:Practical:T0:C0 $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2012-30\2012-30-0011.hex Software Version Seasave V 7.21d Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Aug 26 2012 07:59:18 NMEA Latitude = 52 02.99 N NMEA Longitude = 129 43.85 W NMEA UTC (Time) = Aug 26 2012 07:57:04 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2012-51 2012-30 Station: qcs3 Depth(m): 109 System UTC = Aug 26 2012 06:59:18 # nquan = 15 # nvalues = 6592 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity, Practical [PSU] # name 12 = sal11: Salinity, Practical, 2 [PSU] # name 13 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 14 = flag: flag # span 0 = 1, 6592 # span 1 = 2.349, 101.258 # span 2 = 7.3264, 15.1013 # span 3 = 7.3257, 15.1008 # span 4 = 3.366914, 3.852214 # span 5 = 3.366888, 3.852265 # span 6 = -0.0789, 4.2227 # span 7 = 1.8046, 2.6361 # span 8 = 8.705, 9.032 # span 9 = -1.537, 1.405 # span 10 = 0, 1 # span 11 = 30.8695, 32.8659 # span 12 = 30.8703, 32.8657 # span 13 = 4.41061, 6.35579 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Aug 26 2012 07:57:04 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 63507 # 12-Apr-11 # -4.435468e+004 # -1.845750e-001 # 1.192740e-002 # 3.979900e-002 # 0.000000e+000 # 2.993572e+001 # -3.336200e-004 # 3.759160e-006 # 1.565300e-009 # 0.99986626 # 5.62145 # 0.000000e+000 # 1.283280e-002 # -9.295010e+000 # # # # # # 2710 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.36717391e-003 # 6.46683268e-004 # 2.34981097e-005 # 2.22352352e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2128 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.01926507e+001 # 1.46093888e+000 # -2.51557628e-003 # 2.74924248e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # # # # # # # 0852 # 21-april-2012 # 4.6009 # 2.5060 # # # # # # # # # 0997 # 23-Apr-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.8010e-001 # -0.4816 # 1.4264e-003 # 2.8936e-005 # -9.0212e-007 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 1.5600 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2216 # June 2012 # 1.30000000e+001 # # 0.0427 # # # # datcnv_date = Nov 05 2012 09:40:59, 7.21d [datcnv_vars = 11] # datcnv_in = P:\Cruise_Data_Processing\2012-30\RAW\CTD\2012-30-0011.hex P:\Crui se_Data_Processing\2012-30\Processing\doc\2012-30-ctd-new.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = Nov 05 2012 09:55:28, 7.21d # wildedit_in = P:\Cruise_Data_Processing\2012-30\Processing\convert\2012-30-001 1.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Nov 05 2012 10:22:22, 7.21d # alignctd_in = P:\Cruise_Data_Processing\2012-30\Processing\wildedit\2012-30-00 11.cnv # alignctd_adv = sbeox0V 4.000 # celltm_date = Nov 05 2012 10:24:32, 7.21d # celltm_in = P:\Cruise_Data_Processing\2012-30\Processing\align\2012-30-0011.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 9.0000, 9.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Nov 05 2012 10:25:21, 7.21d [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2012-30\Processing\celltm\2012-30-0011.c nv P:\Cruise_Data_Processing\2012-30\Processing\doc\2012-30-ctd-new.xmlcon # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = yes # file_type = ascii END* CTDEDIT was used to remove some surface records and records corrupted by shed wakes; salinity was cleaned lightly. Data Processing Notes: ---------------------------------------------------------------------- Fluorescence data are nominal and unedited, except that some records were removed in editing temperature and salinity. There was no calibration sampling for dissolved oxygen, but the results of cruise 2012-01 were used to derive DO concentration. A small correction was later added based on negative DO values found during 2012-49 in the anoxic layer of Saanich Inlet. There was no calibration sampling for salinity, but the results of cruise 2012-01 in February 2012 suggest calibration drift is <0.001. The SBE pH sensor data has been removed from this file since there was no field calibration information available and there are concerns about how the sensor performs. For details on processing see processing report: 2012-30-proc.doc. ---------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.48E-01 1) $END !--1--- ---2---- ---3--- ---4---- --5--- --6-- -7-- !Pressu Temperat Fluores Salinity Oxygen Oxyge Numb !re ure: cence: :T0:C0 : n: er_o ! Primary URU: Dissol Disso ~bin ! Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- -------- ------ ----- ---- *END OF HEADER 4.0 15.0754 0.918 30.9295 6.14 267.9 45 5.0 15.0772 0.895 30.9300 6.14 268.2 40 6.0 15.0779 0.914 30.9305 6.15 268.5 33 7.0 15.0779 0.918 30.9304 6.15 268.3 30 8.0 15.0852 0.924 30.9327 6.14 267.9 30 9.0 15.0994 0.908 30.9406 6.14 267.8 24 10.0 15.0950 0.882 30.9425 6.12 266.9 23 11.0 15.0612 0.918 30.9601 6.11 266.8 35 12.0 15.0060 0.998 30.9783 6.12 267.0 32 13.0 14.8232 1.132 30.9966 6.13 267.6 25 14.0 14.6873 1.246 31.0067 6.17 269.4 26 15.0 14.4194 1.468 31.0408 6.22 271.2 28 16.0 14.2004 1.712 31.0669 6.24 272.5 28 17.0 14.0075 1.979 31.0826 6.27 273.5 29 18.0 13.8533 2.474 31.0942 6.29 274.4 29 19.0 13.7978 2.735 31.0980 6.30 274.7 25 20.0 13.7714 2.825 31.0994 6.28 274.1 22 21.0 13.7501 2.962 31.1005 6.26 273.1 22 22.0 13.7035 3.140 31.1040 6.21 271.0 27 23.0 13.6064 3.371 31.1128 6.12 267.0 35 24.0 13.4953 3.657 31.1229 6.02 262.8 29 25.0 13.2238 3.881 31.1474 6.02 262.6 24 26.0 12.9741 3.920 31.1730 6.04 263.3 28 27.0 12.7384 2.985 31.1966 6.05 263.8 35 28.0 12.6808 2.811 31.2037 6.02 262.7 25 29.0 12.6371 2.500 31.2090 6.00 261.6 20 30.0 12.5957 2.361 31.2154 5.98 261.0 19 31.0 12.5617 2.339 31.2203 5.97 260.3 21 32.0 12.4709 2.204 31.2331 5.96 259.9 28 33.0 12.3502 1.922 31.2489 5.93 258.6 42 34.0 12.2912 1.832 31.2573 5.86 255.4 33 35.0 12.2175 1.804 31.2666 5.82 253.9 22 36.0 12.0617 1.524 31.2860 5.80 253.0 21 37.0 11.8825 1.258 31.3084 5.80 252.9 20 38.0 11.7981 1.164 31.3199 5.79 252.5 25 39.0 11.5920 0.992 31.3480 5.79 252.4 34 40.0 11.4857 0.859 31.3650 5.75 250.9 32 41.0 11.3716 0.772 31.3815 5.74 250.3 24 42.0 11.2834 0.639 31.3966 5.74 250.4 24 43.0 11.1256 0.591 31.4233 5.75 250.6 22 44.0 11.0241 0.487 31.4398 5.73 249.7 24 45.0 10.9786 0.482 31.4477 5.71 248.8 26 46.0 10.8900 0.439 31.4665 5.71 249.0 29 47.0 10.7129 0.351 31.5066 5.73 249.8 35 48.0 10.6123 0.317 31.5297 5.73 249.9 36 49.0 10.5793 0.304 31.5376 5.71 248.8 29 50.0 10.5603 0.300 31.5427 5.69 247.9 24 51.0 10.5186 0.292 31.5523 5.68 247.8 22 52.0 10.4428 0.308 31.5705 5.69 248.2 23 53.0 10.3212 0.242 31.5996 5.69 247.9 32 54.0 10.2653 0.214 31.6126 5.64 245.8 41 55.0 10.1729 0.219 31.6348 5.56 242.5 37 56.0 10.0258 0.190 31.6731 5.49 239.5 23 57.0 9.9120 0.179 31.7072 5.47 238.5 22 58.0 9.6708 0.174 31.8031 5.49 239.0 25 59.0 9.4946 0.157 31.8605 5.49 239.0 35 60.0 9.4159 0.140 31.8840 5.48 238.9 31 61.0 9.3893 0.129 31.8910 5.48 238.6 28 62.0 9.3011 0.110 31.9112 5.48 238.7 38 63.0 9.2365 0.102 31.9322 5.45 237.4 36 64.0 9.2013 0.122 31.9478 5.41 235.9 22 65.0 9.1723 0.129 31.9611 5.38 234.2 21 66.0 9.0650 0.109 31.9966 5.34 232.4 27 67.0 8.9464 0.102 32.0361 5.30 230.7 36 68.0 8.7486 0.102 32.1057 5.29 230.4 29 69.0 8.5443 0.093 32.1787 5.30 230.6 28 70.0 8.4835 0.072 32.2004 5.30 230.7 32 71.0 8.4542 0.075 32.2105 5.28 230.1 35 72.0 8.4389 0.054 32.2161 5.25 228.5 27 73.0 8.4114 0.055 32.2280 5.21 226.9 26 74.0 8.3378 0.056 32.2561 5.19 226.2 29 75.0 8.2246 0.060 32.3022 5.19 226.0 35 76.0 8.1003 0.062 32.3400 5.17 225.1 30 77.0 8.0527 0.045 32.3554 5.13 223.5 25 78.0 8.0135 0.055 32.3757 5.11 222.4 24 79.0 7.9569 0.055 32.4093 5.08 221.3 27 80.0 7.9074 0.040 32.4393 5.05 220.1 32 81.0 7.8695 0.056 32.4624 5.03 219.0 30 82.0 7.8256 0.040 32.4918 5.02 218.6 31 83.0 7.8065 0.035 32.5057 4.98 216.7 36 84.0 7.7951 0.026 32.5155 4.89 212.7 29 85.0 7.7593 0.024 32.5411 4.78 208.3 18 86.0 7.6916 0.042 32.5779 4.71 205.2 22 87.0 7.5732 0.039 32.6647 4.69 204.1 23 88.0 7.4735 0.037 32.7340 4.68 203.8 39 89.0 7.4557 0.032 32.7477 4.67 203.2 40 90.0 7.4514 0.036 32.7518 4.64 202.0 28 91.0 7.4452 0.044 32.7577 4.62 201.2 25 92.0 7.4367 0.047 32.7665 4.61 200.9 26 93.0 7.4295 0.039 32.7749 4.60 200.2 32 94.0 7.4153 0.058 32.7870 4.57 199.1 38 95.0 7.4051 0.038 32.7963 4.54 197.7 34 95.9 7.3842 0.050 32.8152 4.51 196.4 28 97.3 7.3565 0.033 32.8396 4.49 195.5 17 98.0 7.3480 0.045 32.8464 4.48 195.1 33 99.0 7.3440 0.030 32.8498 4.48 194.9 28 100.0 7.3362 0.029 32.8565 4.48 195.0 28 100.7 7.3322 0.032 32.8597 4.48 194.9 14