*2013/12/16 15:38:20.87 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2012/08/25 07:47:25.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 98 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : BA8D37D0 NUMBER OF CHANNELS : 7 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 4.307 100.612 2 Temperature:Primary 'deg C (ITS90)' 7.1772 15.0037 3 Fluorescence:URU:Wetlabs mg/m^3 0.32E-01 2.891 4 Salinity:T0:C0 PSS-78 30.9776 32.9869 5 Oxygen:Dissolved:SBE mL/L 4.284 6.128 6 Oxygen:Dissolved:SBE umol/kg 186.4381 267.4539 7 Number_of_bin_records n/a 10 57 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 6 F ' ' 1 7 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2012-30\Pro $END *ADMINISTRATION MISSION : 2012-30 AGENCY : 'PBS, Marine Ecosystems and Aquaculture Division,' CONTINUED : ' Nanaimo, B.C.' COUNTRY : Canada PROJECT : Pacific Hake Stock Assessment SCIENTIST : Grandin C. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Queen Charlotte Sound STATION : QCS3 EVENT NUMBER : 11 LATITUDE : 52 3.01000 N ! (deg min) LONGITUDE : 129 43.76000 W ! (deg min) WATER DEPTH : 108 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0443 $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.1.2 2012/11/05 10:52:52 6235 6235 CLEAN 5.0.4 2012/11/05 10:55:54 6235 6235 SHIFTDAT 3.4 2012/11/05 11:24:01 6235 6235 SHIFTDAT 3.4 2012/11/05 11:24:48 6235 6235 SHIFTDAT 3.4 2012/11/05 11:25:38 6235 6235 SHIFTDAT 3.4 2012/11/05 11:26:36 6235 6235 DELETE 6.3 2012/11/05 11:47:50 6235 2940 CTDEDIT 4.61 2012/11/05 14:59:29 2940 2826 CALIB 11.7 2012/11/05 15:32:15 2826 2826 FILTERS 4.3 2012/11/05 15:32:40 2826 2826 BINAVE 4.1.1 2012/11/05 15:32:57 2826 98 REMOVECH 8.1.1 2012/11/05 15:35:51 98 98 CHGUNITS 3.0 2012/11/05 15:36:34 98 98 REORDER 1.3 2012/11/05 15:37:10 ? ? HDREDIT2 2.5.1 2012/11/05 15:37:35 ? ? CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:38:20 98 98 $END $REMARKS -CLEAN functions: 2012/11/05 10:55:19 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:Wetlabs:ECO-AFL # of Records to Advance (-ve for Delay): At REC# 0 Shift= 12.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: pH:SBE # of Records to Advance (-ve for Delay): At REC# 0 Shift= 48.00 -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 90.72 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT 2012/11/05 14:59:29 114 records were deleted in this editing session. 20 changes in channel Salinity:T0:C0 -CALIB parameters: 2012/11/05 15:32:15 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2012-30\Processing\doc\2012-30-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 14 Oxygen:Dissolved:SBE mL/L 10 0.4800000E-01 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:Wetlabs:ECO-AFL Fluorescence:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2012/11/05 15:35:51 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] pH:SBE [pH Units] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2012/11/05 15:37:35 Applied edit header: P:\Cruise_Data_Processing\2012-30\Processing\doc\2012-30-HDR.TXT Channel 1: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: Salinity:Practical:T0:C0 [PSS-78] Name: Salinity:T0:C0 ==> Salinity:Practical:T0:C0 $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2012-30\2012-30-0008.hex Software Version Seasave V 7.21d Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Aug 25 2012 07:50:04 NMEA Latitude = 52 03.01 N NMEA Longitude = 129 43.76 W NMEA UTC (Time) = Aug 25 2012 07:47:25 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2012-51 2012-30 Station: qcs4 Depth(m): 108 System UTC = Aug 25 2012 06:50:04 # nquan = 15 # nvalues = 6235 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity, Practical [PSU] # name 12 = sal11: Salinity, Practical, 2 [PSU] # name 13 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 14 = flag: flag # span 0 = 1, 6235 # span 1 = 2.692, 100.725 # span 2 = 7.1766, 15.0040 # span 3 = 7.1766, 15.0038 # span 4 = 3.364625, 3.847775 # span 5 = 3.364558, 3.847849 # span 6 = -0.0630, 3.2862 # span 7 = 1.7460, 2.6081 # span 8 = 8.682, 9.026 # span 9 = -1.430, 1.539 # span 10 = 0, 1 # span 11 = 30.9124, 32.9895 # span 12 = 30.9111, 32.9881 # span 13 = 4.22533, 6.35648 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Aug 25 2012 07:47:25 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 63507 # 12-Apr-11 # -4.435468e+004 # -1.845750e-001 # 1.192740e-002 # 3.979900e-002 # 0.000000e+000 # 2.993572e+001 # -3.336200e-004 # 3.759160e-006 # 1.565300e-009 # 0.99986626 # 5.62145 # 0.000000e+000 # 1.283280e-002 # -9.295010e+000 # # # # # # 2710 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.36717391e-003 # 6.46683268e-004 # 2.34981097e-005 # 2.22352352e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2128 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.01926507e+001 # 1.46093888e+000 # -2.51557628e-003 # 2.74924248e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # # # # # # # 0852 # 21-april-2012 # 4.6009 # 2.5060 # # # # # # # # # 0997 # 23-Apr-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.8010e-001 # -0.4816 # 1.4264e-003 # 2.8936e-005 # -9.0212e-007 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 1.5600 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2216 # June 2012 # 1.30000000e+001 # # 0.0427 # # # # datcnv_date = Nov 05 2012 09:40:55, 7.21d [datcnv_vars = 11] # datcnv_in = P:\Cruise_Data_Processing\2012-30\RAW\CTD\2012-30-0008.hex P:\Crui se_Data_Processing\2012-30\Processing\doc\2012-30-ctd-new.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = Nov 05 2012 09:55:26, 7.21d # wildedit_in = P:\Cruise_Data_Processing\2012-30\Processing\convert\2012-30-000 8.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Nov 05 2012 10:22:20, 7.21d # alignctd_in = P:\Cruise_Data_Processing\2012-30\Processing\wildedit\2012-30-00 08.cnv # alignctd_adv = sbeox0V 4.000 # celltm_date = Nov 05 2012 10:24:29, 7.21d # celltm_in = P:\Cruise_Data_Processing\2012-30\Processing\align\2012-30-0008.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 9.0000, 9.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Nov 05 2012 10:25:19, 7.21d [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2012-30\Processing\celltm\2012-30-0008.c nv P:\Cruise_Data_Processing\2012-30\Processing\doc\2012-30-ctd-new.xmlcon # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = yes # file_type = ascii END* CTDEDIT was used to remove some surface records and records corrupted by shed wakes; salinity was cleaned lightly. Data Processing Notes: ---------------------------------------------------------------------- Fluorescence data are nominal and unedited, except that some records were removed in editing temperature and salinity. There was no calibration sampling for dissolved oxygen, but the results of cruise 2012-01 were used to derive DO concentration. A small correction was later added based on negative DO values found during 2012-49 in the anoxic layer of Saanich Inlet. There was no calibration sampling for salinity, but the results of cruise 2012-01 in February 2012 suggest calibration drift is <0.001. The SBE pH sensor data has been removed from this file since there was no field calibration information available and there are concerns about how the sensor performs. For details on processing see processing report: 2012-30-proc.doc. ---------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.48E-01 1) $END !--1--- ---2---- ---3--- ---4---- --5--- --6-- -7-- !Pressu Temperat Fluores Salinity Oxygen Oxyge Numb !re ure: cence: :T0:C0 : n: er_o ! Primary URU: Dissol Disso ~bin ! Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- -------- ------ ----- ---- *END OF HEADER 4.3 15.0001 1.172 30.9778 6.10 266.1 10 5.0 15.0001 1.168 30.9777 6.11 266.8 32 6.0 15.0000 1.184 30.9776 6.12 267.2 39 7.0 15.0012 1.177 30.9776 6.11 266.8 29 8.0 15.0023 1.246 30.9776 6.12 267.0 31 9.0 15.0031 1.245 30.9776 6.13 267.5 33 10.0 15.0037 1.219 30.9777 6.13 267.4 23 11.0 15.0020 1.208 30.9779 6.13 267.4 27 12.0 14.9976 1.270 30.9786 6.13 267.4 34 13.0 14.9953 1.209 30.9789 6.11 266.7 25 14.0 14.9816 1.232 30.9807 6.11 266.8 22 15.0 14.9525 1.262 30.9833 6.11 266.7 25 16.0 14.8138 1.484 30.9939 6.05 263.9 44 16.9 14.7140 1.848 31.0024 6.03 263.3 25 18.0 14.3451 2.321 31.0421 6.09 265.7 17 19.0 13.9583 2.718 31.0736 6.13 267.3 24 20.0 13.7377 2.857 31.0973 6.11 266.4 40 21.0 13.7071 2.891 31.0995 6.05 263.8 29 22.0 13.5267 2.619 31.1156 6.04 263.6 19 23.0 13.3332 2.537 31.1335 6.03 263.1 19 24.0 13.1647 2.567 31.1427 6.02 262.5 23 25.0 12.9709 2.611 31.1572 6.01 262.1 35 26.0 12.8058 2.313 31.1761 6.01 262.0 32 27.0 12.6535 1.846 31.1994 6.00 261.7 21 28.0 12.5992 1.742 31.2075 5.99 261.4 20 29.0 12.5520 1.696 31.2144 6.00 261.6 21 30.0 12.4736 1.736 31.2249 6.00 261.8 39 31.0 12.4654 1.618 31.2269 5.96 260.0 26 32.0 12.4635 1.518 31.2284 5.87 256.0 19 33.0 12.4621 1.485 31.2295 5.75 250.7 18 34.0 12.3654 1.406 31.2415 5.68 247.9 23 35.0 12.1809 1.448 31.2701 5.66 247.0 35 36.0 11.3944 0.922 31.4019 5.72 249.2 27 37.0 11.1478 0.528 31.4421 5.73 249.8 22 38.0 11.0408 0.479 31.4598 5.74 250.1 21 39.0 10.9314 0.470 31.4805 5.74 250.4 25 40.0 10.8710 0.443 31.4939 5.74 250.1 31 41.0 10.8299 0.413 31.5028 5.72 249.6 28 42.0 10.7876 0.390 31.5127 5.70 248.5 22 43.0 10.7672 0.366 31.5188 5.69 247.9 18 44.0 10.7213 0.350 31.5296 5.68 247.6 19 45.0 10.6602 0.350 31.5461 5.66 246.9 26 46.0 10.5973 0.366 31.5623 5.63 245.5 39 47.0 10.5307 0.350 31.5763 5.61 244.5 30 48.0 10.3459 0.284 31.6183 5.61 244.6 23 49.0 10.2744 0.260 31.6409 5.61 244.4 23 50.0 10.2224 0.240 31.6560 5.61 244.5 26 51.0 10.1855 0.264 31.6664 5.62 244.8 28 52.0 10.1513 0.230 31.6757 5.62 245.0 24 53.0 10.1384 0.243 31.6802 5.61 244.7 23 54.0 10.1349 0.230 31.6823 5.61 244.3 25 55.0 10.1286 0.245 31.6852 5.60 244.1 30 56.0 10.0989 0.242 31.6941 5.57 242.6 29 57.0 10.0875 0.214 31.6985 5.55 241.7 24 58.0 10.0822 0.228 31.7003 5.55 241.7 15 59.0 9.9829 0.225 31.7234 5.55 241.9 26 60.0 9.8425 0.203 31.7581 5.55 241.9 40 61.0 9.8011 0.170 31.7671 5.52 240.5 27 62.0 9.7685 0.168 31.7750 5.49 239.3 17 63.0 9.7211 0.160 31.7861 5.46 237.8 18 64.0 9.6412 0.167 31.8057 5.43 236.4 23 65.0 9.4820 0.146 31.8681 5.42 236.2 45 66.0 9.2490 0.120 31.9295 5.45 237.4 26 67.0 9.1429 0.094 31.9533 5.46 237.9 20 68.0 9.0573 0.087 31.9714 5.45 237.6 21 69.0 9.0138 0.082 31.9814 5.40 235.2 27 70.0 8.9992 0.078 31.9863 5.34 232.6 28 71.0 8.9307 0.083 32.0152 5.29 230.6 23 72.0 8.7053 0.070 32.0945 5.28 229.9 19 73.0 8.5713 0.059 32.1335 5.24 228.2 25 74.0 8.3698 0.063 32.2100 5.17 225.0 38 75.0 8.1986 0.059 32.2946 5.10 222.3 32 76.0 7.9909 0.065 32.4024 5.09 221.7 22 77.0 7.9350 0.050 32.4288 5.07 220.7 21 78.0 7.9195 0.061 32.4375 5.01 218.4 28 79.0 7.8699 0.051 32.4663 4.95 215.4 32 80.0 7.7553 0.052 32.5348 4.90 213.5 26 81.0 7.6905 0.063 32.5750 4.88 212.5 23 82.0 7.6321 0.043 32.6058 4.85 211.3 27 83.0 7.5934 0.046 32.6299 4.83 210.4 28 84.0 7.5659 0.062 32.6515 4.80 209.1 23 85.0 7.5604 0.045 32.6578 4.78 208.1 21 86.0 7.5572 0.053 32.6652 4.77 207.5 20 87.0 7.5534 0.049 32.6746 4.75 206.7 26 88.0 7.5423 0.060 32.6852 4.73 206.0 37 89.0 7.5288 0.057 32.6955 4.72 205.6 38 90.0 7.5099 0.057 32.7104 4.65 202.5 57 90.9 7.4666 0.038 32.7502 4.57 199.1 44 92.0 7.4165 0.041 32.7929 4.53 197.0 45 93.0 7.3772 0.048 32.8264 4.50 195.9 48 94.0 7.3652 0.042 32.8367 4.48 194.9 50 95.0 7.3397 0.048 32.8575 4.44 193.2 51 96.0 7.3247 0.051 32.8692 4.39 191.0 36 97.0 7.2654 0.040 32.9152 4.37 190.1 40 98.0 7.2362 0.034 32.9321 4.34 188.9 52 99.0 7.2168 0.035 32.9462 4.32 188.0 39 100.1 7.1881 0.032 32.9741 4.30 186.9 56 100.6 7.1772 0.046 32.9869 4.28 186.4 26