*2013/12/16 15:38:20.82 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2012/08/25 06:12:10.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 129 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : B85D01DB NUMBER OF CHANNELS : 7 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 3.376 130.611 2 Temperature:Primary 'deg C (ITS90)' 7.2347 15.102 3 Fluorescence:URU:Wetlabs mg/m^3 0.27E-01 2.795 4 Salinity:T0:C0 PSS-78 31.0303 32.9242 5 Oxygen:Dissolved:SBE mL/L 4.319 6.166 6 Oxygen:Dissolved:SBE umol/kg 187.9718 269.0313 7 Number_of_bin_records n/a 4 54 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 6 F ' ' 1 7 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2012-30\Pro $END *ADMINISTRATION MISSION : 2012-30 AGENCY : 'PBS, Marine Ecosystems and Aquaculture Division,' CONTINUED : ' Nanaimo, B.C.' COUNTRY : Canada PROJECT : Pacific Hake Stock Assessment SCIENTIST : Grandin C. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Queen Charlotte Sound STATION : QCS4 EVENT NUMBER : 10 LATITUDE : 51 55.10000 N ! (deg min) LONGITUDE : 129 58.40000 W ! (deg min) WATER DEPTH : 137 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0443 $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.1.2 2012/11/05 10:52:49 9485 9485 CLEAN 5.0.4 2012/11/05 10:55:51 9485 9485 SHIFTDAT 3.4 2012/11/05 11:23:58 9485 9485 SHIFTDAT 3.4 2012/11/05 11:24:45 9485 9485 SHIFTDAT 3.4 2012/11/05 11:25:35 9485 9485 SHIFTDAT 3.4 2012/11/05 11:26:33 9485 9485 DELETE 6.3 2012/11/05 11:47:49 9485 4431 CTDEDIT 4.61 2012/11/05 14:56:02 4431 4233 CALIB 11.7 2012/11/05 15:32:14 4233 4233 FILTERS 4.3 2012/11/05 15:32:39 4233 4233 BINAVE 4.1.1 2012/11/05 15:32:57 4233 129 REMOVECH 8.1.1 2012/11/05 15:35:51 129 129 CHGUNITS 3.0 2012/11/05 15:36:34 129 129 REORDER 1.3 2012/11/05 15:37:10 ? ? HDREDIT2 2.5.1 2012/11/05 15:37:35 ? ? CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:38:20 129 129 $END $REMARKS -CLEAN functions: 2012/11/05 10:55:19 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:Wetlabs:ECO-AFL # of Records to Advance (-ve for Delay): At REC# 0 Shift= 12.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: pH:SBE # of Records to Advance (-ve for Delay): At REC# 0 Shift= 48.00 -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 120.93 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT 2012/11/05 14:56:02 198 records were deleted in this editing session. 1 change in channel Temperature:Primary 57 changes in channel Salinity:T0:C0 -CALIB parameters: 2012/11/05 15:32:14 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2012-30\Processing\doc\2012-30-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 14 Oxygen:Dissolved:SBE mL/L 10 0.4800000E-01 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:Wetlabs:ECO-AFL Fluorescence:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2012/11/05 15:35:51 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] pH:SBE [pH Units] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2012/11/05 15:37:35 Applied edit header: P:\Cruise_Data_Processing\2012-30\Processing\doc\2012-30-HDR.TXT Channel 1: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: Salinity:Practical:T0:C0 [PSS-78] Name: Salinity:T0:C0 ==> Salinity:Practical:T0:C0 $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2012-30\2012-30-0007.hex Software Version Seasave V 7.21d Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Aug 25 2012 06:14:05 NMEA Latitude = 51 55.10 N NMEA Longitude = 129 58.40 W NMEA UTC (Time) = Aug 25 2012 06:12:10 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2012-51 2012-30 Station: qcs5 Depth(m): 137 System UTC = Aug 25 2012 05:14:05 # nquan = 15 # nvalues = 9485 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity, Practical [PSU] # name 12 = sal11: Salinity, Practical, 2 [PSU] # name 13 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 14 = flag: flag # span 0 = 1, 9485 # span 1 = 1.641, 130.925 # span 2 = 7.2340, 15.1112 # span 3 = 7.2327, 15.1096 # span 4 = 3.365680, 3.863099 # span 5 = 3.365625, 3.862846 # span 6 = -0.0789, 3.0322 # span 7 = 1.7546, 2.6105 # span 8 = 8.672, 9.018 # span 9 = -1.718, 1.603 # span 10 = 0, 1 # span 11 = 30.9497, 32.9247 # span 12 = 30.9951, 32.9255 # span 13 = 4.26874, 6.23265 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Aug 25 2012 06:12:10 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 63507 # 12-Apr-11 # -4.435468e+004 # -1.845750e-001 # 1.192740e-002 # 3.979900e-002 # 0.000000e+000 # 2.993572e+001 # -3.336200e-004 # 3.759160e-006 # 1.565300e-009 # 0.99986626 # 5.62145 # 0.000000e+000 # 1.283280e-002 # -9.295010e+000 # # # # # # 2710 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.36717391e-003 # 6.46683268e-004 # 2.34981097e-005 # 2.22352352e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2128 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.01926507e+001 # 1.46093888e+000 # -2.51557628e-003 # 2.74924248e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # # # # # # # 0852 # 21-april-2012 # 4.6009 # 2.5060 # # # # # # # # # 0997 # 23-Apr-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.8010e-001 # -0.4816 # 1.4264e-003 # 2.8936e-005 # -9.0212e-007 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 1.5600 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2216 # June 2012 # 1.30000000e+001 # # 0.0427 # # # # datcnv_date = Nov 05 2012 09:40:53, 7.21d [datcnv_vars = 11] # datcnv_in = P:\Cruise_Data_Processing\2012-30\RAW\CTD\2012-30-0007.hex P:\Crui se_Data_Processing\2012-30\Processing\doc\2012-30-ctd-new.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = Nov 05 2012 09:55:25, 7.21d # wildedit_in = P:\Cruise_Data_Processing\2012-30\Processing\convert\2012-30-000 7.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Nov 05 2012 10:22:19, 7.21d # alignctd_in = P:\Cruise_Data_Processing\2012-30\Processing\wildedit\2012-30-00 07.cnv # alignctd_adv = sbeox0V 4.000 # celltm_date = Nov 05 2012 10:24:29, 7.21d # celltm_in = P:\Cruise_Data_Processing\2012-30\Processing\align\2012-30-0007.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 9.0000, 9.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Nov 05 2012 10:25:18, 7.21d [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2012-30\Processing\celltm\2012-30-0007.c nv P:\Cruise_Data_Processing\2012-30\Processing\doc\2012-30-ctd-new.xmlcon # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = yes # file_type = ascii END* CTDEDIT was used to remove some surface records and records corrupted by shed wakes; salinity was cleaned lightly. Data Processing Notes: ---------------------------------------------------------------------- Fluorescence data are nominal and unedited, except that some records were removed in editing temperature and salinity. There was no calibration sampling for dissolved oxygen, but the results of cruise 2012-01 were used to derive DO concentration. A small correction was later added based on negative DO values found during 2012-49 in the anoxic layer of Saanich Inlet. There was no calibration sampling for salinity, but the results of cruise 2012-01 in February 2012 suggest calibration drift is <0.001. The SBE pH sensor data has been removed from this file since there was no field calibration information available and there are concerns about how the sensor performs. For details on processing see processing report: 2012-30-proc.doc. ---------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.48E-01 1) $END !--1--- ---2---- ---3--- ---4---- --5--- --6-- -7-- !Pressu Temperat Fluores Salinity Oxygen Oxyge Numb !re ure: cence: :T0:C0 : n: er_o ! Primary URU: Dissol Disso ~bin ! Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- -------- ------ ----- ---- *END OF HEADER 3.4 15.1020 1.350 31.0305 6.14 268.0 5 4.0 15.1008 1.381 31.0304 6.14 268.0 28 5.0 15.1000 1.392 31.0304 6.14 268.0 24 6.1 15.1002 1.375 31.0306 6.14 268.0 20 7.0 15.1018 1.373 31.0303 6.14 267.8 28 8.0 15.1019 1.361 31.0305 6.14 267.9 40 9.0 15.0929 1.386 31.0308 6.13 267.7 22 10.0 15.0311 1.471 31.0333 6.14 267.9 39 11.1 14.9366 1.633 31.0377 6.10 266.3 27 12.0 14.8673 1.744 31.0414 6.11 266.6 27 13.1 14.6279 2.195 31.0568 6.13 267.5 35 13.9 14.3602 2.573 31.0763 6.15 268.2 40 15.0 14.2110 2.614 31.0888 6.16 268.8 27 16.0 14.1170 2.589 31.0975 6.15 268.5 32 17.0 14.0576 2.585 31.1030 6.16 268.7 44 18.0 14.0049 2.561 31.1083 6.17 269.0 30 19.0 13.9313 2.628 31.1171 6.16 268.8 30 20.0 13.8739 2.773 31.1250 6.12 267.0 54 21.0 13.7256 2.795 31.1417 5.99 261.5 35 22.0 13.5935 2.751 31.1563 5.95 259.6 24 23.0 13.3338 2.526 31.1849 5.96 260.1 22 24.0 12.9963 2.242 31.2291 6.00 261.6 23 25.1 12.8013 1.997 31.2534 6.02 262.4 32 26.0 12.7419 1.941 31.2614 5.91 257.8 45 27.0 12.6316 1.746 31.2775 5.76 251.0 34 28.0 12.3378 1.430 31.3175 5.71 248.8 27 29.0 11.9184 1.101 31.3658 5.67 247.3 28 30.0 11.6396 0.915 31.3937 5.61 244.5 28 31.0 11.3385 0.808 31.4413 5.65 246.2 29 32.0 10.9092 0.666 31.5128 5.71 248.9 39 33.0 10.6487 0.548 31.5566 5.68 247.7 40 33.7 10.6059 0.530 31.5604 5.65 246.1 11 35.3 10.4151 0.506 31.5987 5.61 244.6 15 36.0 10.2687 0.430 31.6255 5.61 244.7 37 37.0 10.1051 0.324 31.6558 5.62 244.8 31 38.0 10.0101 0.264 31.6729 5.61 244.7 24 39.0 9.9546 0.268 31.6847 5.61 244.7 27 40.0 9.8496 0.254 31.7092 5.59 243.5 54 41.0 9.7540 0.245 31.7345 5.57 242.8 30 42.0 9.6563 0.211 31.7578 5.58 243.2 31 43.0 9.5217 0.167 31.7869 5.60 244.0 37 44.0 9.4303 0.161 31.8031 5.61 244.4 32 45.0 9.3960 0.135 31.8091 5.61 244.5 30 46.0 9.3797 0.139 31.8136 5.61 244.3 30 47.0 9.3569 0.133 31.8203 5.59 243.6 30 48.0 9.3470 0.140 31.8244 5.55 242.0 36 49.0 9.3157 0.134 31.8355 5.52 240.3 35 50.1 9.1784 0.120 31.8811 5.50 239.7 45 50.9 9.0755 0.105 31.9187 5.50 239.8 41 52.0 9.0017 0.111 31.9431 5.50 239.7 22 53.0 8.9652 0.095 31.9560 5.49 239.1 22 54.0 8.9493 0.081 31.9629 5.47 238.2 34 55.0 8.8827 0.090 31.9898 5.43 236.3 40 56.0 8.7870 0.079 32.0284 5.37 233.9 33 57.0 8.6939 0.076 32.0687 5.35 232.9 32 58.0 8.4987 0.075 32.1663 5.35 233.0 41 59.0 8.4680 0.058 32.1800 5.35 232.9 36 60.0 8.4401 0.064 32.1911 5.35 233.0 25 61.0 8.3914 0.088 32.2102 5.35 233.1 27 62.0 8.3736 0.074 32.2174 5.35 233.0 39 62.9 8.3588 0.069 32.2232 5.35 232.9 37 64.0 8.3350 0.063 32.2319 5.34 232.7 35 65.0 8.3133 0.054 32.2405 5.33 232.1 47 66.0 8.2918 0.049 32.2494 5.30 230.6 30 67.0 8.2741 0.061 32.2573 5.28 230.2 26 68.0 8.1891 0.063 32.2938 5.29 230.2 28 69.0 8.1079 0.063 32.3316 5.25 228.8 38 70.0 8.0897 0.057 32.3427 5.21 227.0 36 71.0 8.0008 0.056 32.4038 5.20 226.4 37 72.0 7.9586 0.059 32.4286 5.20 226.3 40 73.0 7.9415 0.049 32.4368 5.19 225.9 33 74.0 7.9302 0.052 32.4426 5.18 225.8 32 75.0 7.9045 0.052 32.4559 5.18 225.7 30 76.0 7.8811 0.055 32.4696 5.18 225.4 30 77.0 7.8758 0.047 32.4731 5.16 224.8 40 77.9 7.8561 0.044 32.4848 5.14 224.0 36 79.0 7.8258 0.062 32.5050 5.13 223.3 27 80.0 7.8199 0.057 32.5095 5.10 222.2 26 81.0 7.8118 0.051 32.5161 5.05 220.0 33 82.0 7.7577 0.048 32.5537 5.02 218.5 49 83.0 7.7038 0.056 32.5894 5.00 217.5 39 84.0 7.6920 0.055 32.5972 4.98 216.9 26 85.0 7.6899 0.048 32.5990 4.98 216.9 20 86.0 7.6719 0.062 32.6116 4.98 217.0 24 87.1 7.6607 0.046 32.6178 4.99 217.1 42 88.1 7.6531 0.064 32.6217 4.98 216.7 34 89.0 7.6345 0.050 32.6338 4.94 214.9 33 90.0 7.6133 0.044 32.6506 4.86 211.6 33 91.0 7.6029 0.051 32.6595 4.79 208.7 33 92.0 7.5863 0.060 32.6718 4.75 206.7 27 93.0 7.5622 0.034 32.6881 4.72 205.3 26 94.0 7.5228 0.054 32.7152 4.69 204.2 30 95.0 7.5027 0.052 32.7278 4.66 202.7 44 96.0 7.4897 0.049 32.7353 4.60 200.2 46 97.0 7.4543 0.032 32.7576 4.57 198.8 39 98.0 7.4245 0.041 32.7768 4.56 198.5 31 99.0 7.4218 0.041 32.7787 4.56 198.4 31 100.0 7.4225 0.046 32.7783 4.55 198.1 24 101.0 7.4214 0.037 32.7793 4.55 197.9 23 102.1 7.4128 0.046 32.7847 4.53 197.2 40 103.0 7.4001 0.056 32.7930 4.52 196.7 39 104.0 7.3850 0.049 32.8029 4.51 196.5 35 105.0 7.3814 0.031 32.8053 4.51 196.3 36 106.0 7.3799 0.052 32.8064 4.51 196.3 30 107.0 7.3791 0.051 32.8072 4.51 196.3 25 108.1 7.3788 0.054 32.8075 4.51 196.1 28 109.0 7.3786 0.050 32.8078 4.50 196.0 46 110.0 7.3785 0.043 32.8081 4.50 195.9 31 111.0 7.3779 0.041 32.8087 4.50 195.8 32 112.0 7.3770 0.048 32.8095 4.50 195.7 36 113.0 7.3766 0.069 32.8099 4.50 196.0 40 114.0 7.3761 0.045 32.8104 4.50 195.8 36 115.0 7.3755 0.041 32.8109 4.49 195.3 25 116.0 7.3738 0.054 32.8124 4.48 195.0 27 117.0 7.3696 0.042 32.8157 4.46 194.3 35 118.0 7.3547 0.042 32.8273 4.44 193.3 38 119.0 7.3327 0.031 32.8451 4.43 193.0 28 120.0 7.3242 0.027 32.8516 4.43 192.9 36 120.9 7.3213 0.037 32.8541 4.42 192.3 44 122.0 7.3119 0.046 32.8617 4.41 191.8 29 123.0 7.3066 0.039 32.8661 4.40 191.7 33 124.0 7.3005 0.043 32.8709 4.40 191.3 42 125.0 7.2947 0.034 32.8757 4.39 191.1 40 126.0 7.2896 0.045 32.8797 4.38 190.5 41 127.0 7.2839 0.054 32.8844 4.35 189.3 37 128.0 7.2625 0.038 32.9017 4.34 188.7 34 129.0 7.2465 0.051 32.9144 4.33 188.5 48 130.0 7.2383 0.042 32.9210 4.32 188.1 34 130.6 7.2347 0.036 32.9242 4.32 188.0 4