*2013/12/16 15:38:20.52 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2012/08/24 05:45:37.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 123 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 2F0C643E NUMBER OF CHANNELS : 7 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Pressure decibar 5.354 126.536 2 Temperature:Primary 'deg C (ITS90)' 6.5369 14.312 3 Fluorescence:URU:Wetlabs mg/m^3 0.32E-01 2.348 4 Salinity:T0:C0 PSS-78 31.1282 33.5671 5 Oxygen:Dissolved:SBE mL/L 2.92 6.152 6 Oxygen:Dissolved:SBE umol/kg 127.0102 268.4327 7 Number_of_bin_records n/a 7 62 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 7 F ' ' 2 6 -99 ' ' 6 F ' ' 1 7 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: P:\Cruise_Data_Processing\2012-30\Pro $END *ADMINISTRATION MISSION : 2012-30 AGENCY : 'PBS, Marine Ecosystems and Aquaculture Division,' CONTINUED : ' Nanaimo, B.C.' COUNTRY : Canada PROJECT : Pacific Hake Stock Assessment SCIENTIST : Grandin C. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Queen Charlotte Sound STATION : GI02 EVENT NUMBER : 5 LATITUDE : 51 30.35000 N ! (deg min) LONGITUDE : 129 37.69000 W ! (deg min) WATER DEPTH : 140 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0443 $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.1.2 2012/11/05 10:52:26 8861 8861 CLEAN 5.0.4 2012/11/05 10:55:26 8861 8861 SHIFTDAT 3.4 2012/11/05 11:23:34 8861 8861 SHIFTDAT 3.4 2012/11/05 11:24:21 8861 8861 SHIFTDAT 3.4 2012/11/05 11:25:08 8861 8861 SHIFTDAT 3.4 2012/11/05 11:26:09 8861 8861 DELETE 6.3 2012/11/05 11:47:19 8861 3314 CTDEDIT 4.61 2012/11/05 13:48:40 3314 2939 CALIB 11.7 2012/11/05 15:31:47 2939 2939 FILTERS 4.3 2012/11/05 15:32:27 2939 2939 BINAVE 4.1.1 2012/11/05 15:32:50 2939 123 REMOVECH 8.1.1 2012/11/05 15:35:51 123 123 CHGUNITS 3.0 2012/11/05 15:36:33 123 123 REORDER 1.3 2012/11/05 15:37:10 ? ? HDREDIT2 2.5.1 2012/11/05 15:37:35 ? ? CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:38:20 123 123 $END $REMARKS -CLEAN functions: 2012/11/05 10:55:19 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:Wetlabs:ECO-AFL # of Records to Advance (-ve for Delay): At REC# 0 Shift= 12.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: pH:SBE # of Records to Advance (-ve for Delay): At REC# 0 Shift= 48.00 -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 116.74 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT 2012/11/05 13:48:40 375 records were deleted in this editing session. 99 changes in channel Salinity:T0:C0 -CALIB parameters: 2012/11/05 15:31:47 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2012-30\Processing\doc\2012-30-recal1.CCF Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 14 Oxygen:Dissolved:SBE mL/L 10 0.4800000E-01 0.1000000E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:Wetlabs:ECO-AFL Fluorescence:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2012/11/05 15:35:51 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] pH:SBE [pH Units] Descent_Rate [m/s] Status:Pump Salinity:T1:C1 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2012/11/05 15:37:35 Applied edit header: P:\Cruise_Data_Processing\2012-30\Processing\doc\2012-30-HDR.TXT Channel 1: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 3: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 4: Salinity:Practical:T0:C0 [PSS-78] Name: Salinity:T0:C0 ==> Salinity:Practical:T0:C0 $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\Data\2012-30\2012-30-0003.hex Software Version Seasave V 7.21d Temperature SN = 2106 Conductivity SN = 1764 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Aug 24 2012 05:47:29 NMEA Latitude = 51 30.35 N NMEA Longitude = 129 37.69 W NMEA UTC (Time) = Aug 24 2012 05:45:37 Store Lat/Lon Data = Append to Every Scan SBE 11plus V 5.1e number of scans to average = 1 pressure baud rate = 9600 NMEA baud rate = 4800 Latitude/Longitude added to scan GPIB address = 1 advance primary conductivity 0.073 seconds advance secondary conductivity 0.073 seconds S> Ricker 2012-51 2012-30 Station: gi02 Depth(m): 140 System UTC = Aug 24 2012 04:47:29 # nquan = 15 # nvalues = 8861 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = flECO-AFL: Fluorescence, WET Labs ECO-AFL/FL [mg/m^3] # name 7 = sbeox0V: Oxygen raw, SBE 43 [V] # name 8 = ph: pH # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity, Practical [PSU] # name 12 = sal11: Salinity, Practical, 2 [PSU] # name 13 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 14 = flag: flag # span 0 = 1, 8861 # span 1 = 2.176, 126.738 # span 2 = 6.5360, 14.3197 # span 3 = 6.5370, 14.3209 # span 4 = 3.362602, 3.804590 # span 5 = 3.362590, 3.804806 # span 6 = -0.0948, 6.0481 # span 7 = 1.3272, 2.5824 # span 8 = 8.519, 8.988 # span 9 = -3.769, 2.908 # span 10 = 0, 1 # span 11 = 31.1034, 33.5680 # span 12 = 31.0979, 33.5667 # span 13 = 2.86599, 6.22571 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Aug 24 2012 05:45:37 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 2106 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.14706003e-003 # 6.31100076e-004 # 2.13431760e-005 # 2.18854475e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1764 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.15464915e+000 # 4.87579437e-001 # -6.56660246e-004 # 5.55755549e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 63507 # 12-Apr-11 # -4.435468e+004 # -1.845750e-001 # 1.192740e-002 # 3.979900e-002 # 0.000000e+000 # 2.993572e+001 # -3.336200e-004 # 3.759160e-006 # 1.565300e-009 # 0.99986626 # 5.62145 # 0.000000e+000 # 1.283280e-002 # -9.295010e+000 # # # # # # 2710 # 01-Apr-11 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.36717391e-003 # 6.46683268e-004 # 2.34981097e-005 # 2.22352352e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 2128 # 29-Mar-11 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -1.01926507e+001 # 1.46093888e+000 # -2.51557628e-003 # 2.74924248e-004 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # # # # # # # # # # # # # 0852 # 21-april-2012 # 4.6009 # 2.5060 # # # # # # # # # 0997 # 23-Apr-11p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.8010e-001 # -0.4816 # 1.4264e-003 # 2.8936e-005 # -9.0212e-007 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 1.5600 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

# # # # # # # 2216 # June 2012 # 1.30000000e+001 # # 0.0427 # # # # datcnv_date = Nov 05 2012 09:40:43, 7.21d [datcnv_vars = 11] # datcnv_in = P:\Cruise_Data_Processing\2012-30\RAW\CTD\2012-30-0003.hex P:\Crui se_Data_Processing\2012-30\Processing\doc\2012-30-ctd-new.xmlcon # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = Nov 05 2012 09:55:18, 7.21d # wildedit_in = P:\Cruise_Data_Processing\2012-30\Processing\convert\2012-30-000 3.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Nov 05 2012 10:22:12, 7.21d # alignctd_in = P:\Cruise_Data_Processing\2012-30\Processing\wildedit\2012-30-00 03.cnv # alignctd_adv = sbeox0V 4.000 # celltm_date = Nov 05 2012 10:24:22, 7.21d # celltm_in = P:\Cruise_Data_Processing\2012-30\Processing\align\2012-30-0003.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 9.0000, 9.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Nov 05 2012 10:25:10, 7.21d [derive_vars = 3] # Derive_in = P:\Cruise_Data_Processing\2012-30\Processing\celltm\2012-30-0003.c nv P:\Cruise_Data_Processing\2012-30\Processing\doc\2012-30-ctd-new.xmlcon # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = yes # file_type = ascii END* CTDEDIT was used to remove some surface records and records corrupted by shed wakes; salinity was cleaned lightly. Data Processing Notes: ---------------------------------------------------------------------- Fluorescence data are nominal and unedited, except that some records were removed in editing temperature and salinity. There was no calibration sampling for dissolved oxygen, but the results of cruise 2012-01 were used to derive DO concentration. A small correction was later added based on negative DO values found during 2012-49 in the anoxic layer of Saanich Inlet. There was no calibration sampling for salinity, but the results of cruise 2012-01 in February 2012 suggest calibration drift is <0.001. The SBE pH sensor data has been removed from this file since there was no field calibration information available and there are concerns about how the sensor performs. For details on processing see processing report: 2012-30-proc.doc. ---------------------------------------------------------------------- *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.48E-01 1) $END !--1--- ---2---- ---3--- ---4---- --5--- --6-- -7-- !Pressu Temperat Fluores Salinity Oxygen Oxyge Numb !re ure: cence: :T0:C0 : n: er_o ! Primary URU: Dissol Disso ~bin ! Wetlabs ved: lved: _rec ! SBE SBE ords !------ -------- ------- -------- ------ ----- ---- *END OF HEADER 5.4 14.3089 1.535 31.1288 6.15 268.2 7 6.1 14.3085 1.517 31.1286 6.15 268.4 28 7.2 14.3116 1.515 31.1282 6.11 266.8 19 8.0 14.3120 1.599 31.1282 6.03 263.2 25 9.0 14.2981 1.603 31.1308 6.01 262.1 19 10.0 14.2995 1.621 31.1306 6.01 262.4 15 11.0 14.2046 1.624 31.1472 6.02 262.8 17 12.0 13.8061 1.780 31.2137 6.05 264.1 22 13.0 13.6288 1.844 31.2394 6.03 263.0 31 14.0 13.4447 2.040 31.2575 5.95 259.4 31 15.0 13.1925 2.054 31.2861 5.94 259.1 18 16.0 13.0153 2.132 31.3017 5.96 259.9 13 17.0 12.8533 2.211 31.3101 5.99 261.1 15 18.0 12.8291 2.273 31.3126 6.00 261.7 19 18.9 12.6168 2.161 31.3154 6.03 262.9 18 20.0 12.5322 2.255 31.3133 6.03 263.1 23 21.0 12.5483 2.348 31.3139 6.03 262.9 18 21.8 12.5314 2.295 31.3144 6.03 263.0 12 23.1 12.4905 2.331 31.3153 6.00 261.6 11 24.0 12.4911 2.076 31.3144 6.00 261.5 11 25.0 12.4828 2.154 31.3153 6.00 261.7 9 26.0 12.4821 2.270 31.3155 6.00 261.8 8 27.0 12.4684 2.212 31.3156 6.01 262.2 9 28.0 12.4275 2.237 31.3186 6.02 262.5 10 28.9 12.4103 2.203 31.3224 6.01 262.0 14 30.0 12.3732 2.139 31.3266 5.18 226.1 18 31.0 12.1068 2.100 31.3248 5.03 219.1 10 32.0 11.9494 2.158 31.3153 4.91 214.0 14 33.0 11.1580 1.977 31.3746 4.85 211.4 21 34.0 9.8348 1.048 31.5210 4.81 209.6 32 34.9 9.4060 0.744 31.6032 4.75 207.2 25 36.0 9.2735 0.403 31.6582 4.74 206.6 16 37.0 9.2280 0.378 31.7060 4.74 206.4 15 38.1 9.1862 0.393 31.7430 4.73 206.2 20 39.0 9.1380 0.404 31.7875 4.68 204.0 21 40.0 9.1095 0.355 31.8212 4.64 202.3 18 41.0 9.0878 0.367 31.8484 4.64 202.1 15 42.0 9.0459 0.370 31.9057 4.64 202.4 18 43.0 8.9940 0.354 31.9713 4.62 201.4 22 44.0 8.9513 0.305 31.9979 4.59 200.0 20 45.0 8.9400 0.330 32.0151 4.57 199.1 24 46.0 8.9183 0.278 32.0294 4.54 197.9 40 46.9 8.8850 0.296 32.0361 4.53 197.2 32 48.0 8.8457 0.266 32.0474 4.52 197.0 23 49.0 8.8356 0.258 32.0551 4.52 196.7 33 50.0 8.8306 0.267 32.0632 4.49 195.5 27 51.0 8.8175 0.268 32.0695 4.49 195.4 19 52.0 8.8052 0.246 32.1006 4.49 195.4 17 53.0 8.7880 0.225 32.1445 4.49 195.4 22 53.9 8.7094 0.193 32.2200 4.48 195.0 34 54.9 8.6794 0.180 32.2593 4.45 193.9 32 56.0 8.5942 0.157 32.3075 4.45 193.7 27 57.0 8.5390 0.142 32.3298 4.41 191.8 45 57.9 8.4751 0.149 32.3535 4.40 191.8 22 59.0 8.3873 0.135 32.3795 4.44 193.2 17 60.1 8.2438 0.143 32.4210 4.46 194.2 25 60.9 8.1069 0.144 32.4530 4.46 194.3 32 62.0 8.0635 0.152 32.4743 4.45 193.9 19 63.0 8.0576 0.136 32.4919 4.45 193.7 16 64.1 8.0434 0.119 32.5048 4.44 193.4 36 64.9 8.0405 0.118 32.5119 4.42 192.5 39 66.0 8.0339 0.119 32.5257 4.41 192.0 27 67.1 8.0097 0.108 32.5369 4.39 191.1 52 67.9 7.9946 0.118 32.5441 4.36 189.6 33 69.0 7.9656 0.101 32.5801 4.34 189.2 17 70.0 7.9443 0.078 32.5923 4.35 189.2 17 71.0 7.9456 0.111 32.5995 4.35 189.3 24 71.9 7.9390 0.094 32.6033 4.33 188.7 21 73.0 7.9258 0.109 32.6086 4.32 187.9 13 74.0 7.9110 0.109 32.6138 4.31 187.7 12 75.0 7.8860 0.085 32.6256 4.31 187.6 15 76.0 7.8461 0.091 32.6479 4.31 187.5 27 77.0 7.8075 0.096 32.6694 4.29 186.8 23 78.0 7.8045 0.083 32.6709 4.29 186.8 25 79.0 7.8026 0.095 32.6716 4.29 186.8 35 80.0 7.8017 0.093 32.6717 4.29 186.7 62 81.0 7.7963 0.097 32.6730 4.29 186.8 34 82.0 7.7698 0.089 32.6781 4.30 187.0 26 82.9 7.7498 0.081 32.6858 4.29 186.6 35 84.0 7.7117 0.080 32.7035 4.20 182.7 30 85.0 7.6629 0.070 32.7222 4.16 181.0 18 86.0 7.5821 0.060 32.7629 4.14 180.2 18 87.1 7.4127 0.058 32.8710 4.14 180.2 28 88.2 7.3763 0.063 32.8966 4.07 177.4 20 89.0 7.3712 0.061 32.9050 4.04 175.8 24 90.0 7.3579 0.061 32.9247 4.01 174.6 25 91.0 7.3415 0.081 32.9425 3.99 173.6 28 92.1 7.3141 0.055 32.9661 3.98 173.0 41 93.0 7.2928 0.068 32.9825 3.91 170.0 27 94.0 7.2518 0.055 33.0092 3.88 168.7 22 95.0 7.2004 0.063 33.0453 3.86 168.1 21 96.0 7.1692 0.055 33.0687 3.85 167.5 29 97.0 7.1446 0.062 33.0888 3.83 166.5 43 98.0 7.1297 0.063 33.1013 3.79 165.0 32 99.1 7.0844 0.050 33.1386 3.76 163.7 44 100.1 7.0489 0.060 33.1673 3.65 159.0 30 101.0 7.0100 0.048 33.1994 3.56 154.8 25 102.0 6.9696 0.053 33.2361 3.46 150.5 22 103.0 6.9427 0.059 33.2615 3.40 148.1 19 104.0 6.8589 0.050 33.3341 3.39 147.5 21 105.0 6.8236 0.053 33.3591 3.36 146.1 33 106.0 6.8220 0.049 33.3610 3.20 139.4 14 107.0 6.8093 0.063 33.3723 3.17 137.8 12 108.0 6.7794 0.057 33.3897 3.15 136.9 8 109.0 6.7299 0.050 33.4341 3.13 136.3 11 110.0 6.6573 0.045 33.4877 3.12 135.8 24 111.0 6.6455 0.044 33.4958 3.10 134.6 17 112.0 6.6391 0.046 33.5006 3.10 134.8 16 112.8 6.6394 0.049 33.5008 3.10 134.6 11 114.0 6.6313 0.047 33.5070 3.05 132.8 22 115.0 6.6272 0.040 33.5101 3.05 132.6 16 116.0 6.6230 0.049 33.5134 3.04 132.1 19 117.0 6.6101 0.048 33.5216 3.01 131.0 33 118.0 6.5874 0.042 33.5335 2.98 129.5 23 119.0 6.5722 0.045 33.5420 2.96 129.0 24 120.0 6.5655 0.041 33.5461 2.95 128.5 27 121.1 6.5569 0.064 33.5515 2.95 128.3 49 121.9 6.5560 0.049 33.5524 2.94 127.8 53 123.0 6.5501 0.043 33.5569 2.93 127.4 25 124.0 6.5486 0.048 33.5580 2.93 127.4 29 125.0 6.5426 0.054 33.5624 2.93 127.4 44 126.0 6.5414 0.047 33.5635 2.92 127.0 37 126.5 6.5369 0.032 33.5671 2.92 127.0 9