*2020/01/22 11:47:55.95 *IOS HEADER VERSION 2.0 2016/04/28 2016/06/13 IVF16 *FILE START TIME : UTC 2012/05/28 15:44:04.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 20 DATA DESCRIPTION : Bottle:Rosette:Up:Stop + CTD:Up FILE TYPE : ASCII CRC : 5812815B NUMBER OF CHANNELS : 13 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Bottle_Number n/a 1 20 2 Bottle:Firing_Sequence n/a 1 20 3 Pressure decibar 2.7 67.4 4 Temperature:Secondary 'deg C (ITS90)' 6.603 7.8712 5 Transmissivity %/metre 58.2 64.3 6 Fluorescence:URU:Seapoint mg/m^3 0.407 1.128 7 Fluorescence:URU:Wetlabs mg/m^3 0.835 2.174 8 PAR uE/m^2/sec 1.5 241.3 9 Salinity:T1:C1 PSS-78 32.7128 32.7379 10 Oxygen:Dissolved:SBE mL/L 6.96 7.11 11 Oxygen:Dissolved:SBE umol/kg 302.9 309.6 12 Number_of_bin_records n/a 39 241 13 Sample_Number n/a 332 351 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 3 I I 0 2 -99 ' ' 3 I I 0 3 -99 ' ' 7 F ' ' 1 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 6 F R4 1 6 -99 ' ' 8 F R4 3 7 -99 ' ' 8 F ' ' 3 8 -99 ' ' 7 F ' ' 1 9 -99 ' ' 9 F ' ' 4 10 -99 ' ' 7 F ' ' 2 11 -99 ' ' 6 F ' ' 1 12 ' ' ' ' 5 I I 0 13 -99 ' ' 5 I I 0 $END $REMARKS Data quality is expressed with the following flags ---------------------------------------------------------------------------- 1 = Sample for this measurement was drawn from water bottle but not analyzed (not normally used). 2 = Acceptable measurement (not normally used). 3 = Questionable measurement (no problem observed in sampling or analysis, but value is not trusted, nonetheless; includes outlyers). 4 = Bad measurement (known problem with sampling or analysis, but not serious enough to completely discard the value). 5 = Not reported (lost sample; unredeemably bad measurement). 6 = Mean of replicate measurements. 7 = Manual chromatographic peak measurement. 8 = Irregular digital chromatographic peak integration. 9 = Sample not drawn for this measurement from this bottle (not normally used). ---------------------------------------------------------------------------- $END *ADMINISTRATION MISSION : 2012-12 AGENCY : IOS, Ocean Sciences Division, Sidney, B.C. COUNTRY : Canada PROJECT : Line P SCIENTIST : Robert M. PLATFORM : John P. Tully *LOCATION GEOGRAPHIC AREA : North-East Pacific STATION : P16 EVENT NUMBER : 42 LATITUDE : 49 17.04000 N ! (deg min) LONGITUDE : 134 40.00000 W ! (deg min) WATER DEPTH : 3635 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0506 LOCATION : Mid-ship ! custom item $REMARKS SOFTWARE VERSION SEASAVE V 7.21B $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.1.2 2012/08/15 12:07:40 2301 2301 CLEAN 5.0.4 2012/08/15 12:08:34 2301 2301 ADDSAMP 3.5 2012/08/15 12:55:08 2301 2301 BINAVE 4.1.1 2012/08/17 08:45:45 2301 20 MERGE 3.4 2012/08/17 08:46:03 20 20 CLEAN 5.0.4 2012/08/17 08:46:10 20 20 CALIB 11.7 2012/08/29 13:21:06 20 20 SORT 3.5 2012/08/29 13:21:21 20 20 REMOVECH 8.1.1 2012/08/29 13:21:52 20 20 CHGUNITS 3.0 2012/08/29 13:22:57 20 20 CHGUNITS 3.0 2012/08/29 13:23:17 20 20 REORDER 1.3 2012/08/29 13:23:34 ? ? HDREDIT2 2.5.1 2012/10/05 10:28:47 ? ? MERGE 3.4 2012/10/09 15:20:28 20 20 REORDER 1.3 2012/10/09 15:20:44 ? ? SORT 3.5 2012/11/19 15:52:26 20 20 REMOVECH 8.1.1 2012/11/19 15:55:01 20 20 MERGE 3.4 2012/11/19 16:27:26 20 20 REORDER 1.3 2012/11/19 16:30:03 ? ? SORT 3.5 2012/11/19 16:30:07 20 20 CALIB 11.7 2013/06/04 13:17:51 20 20 HDREDIT2 2.6 2013/07/08 08:52:07 ? ? CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:37:27 20 20 HDREDIT2 3.2 2020/01/22 11:47:55 ? ? $END $REMARKS -CLEAN functions: 2012/08/15 12:08:12 20 Interpolation by Channel 1: Scan_Number [n/a] in Pressure Set event to last 4 characters of file name -The following ADDSAMP parameters were used: Sample Number Lookup File: P:\Cruise_Data_Processing\2012-12\Processing\hydro\addsamp.csv Bottle Channel Name: Bottle_Number -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -The following MERGE parameters were used: 2012/08/17 08:46:01 2012/08/17 08:46:02 2012/08/17 08:46: Merge Channel: Bottle_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Event_Number, Bottle:Position, Salinity:Bottle, Flag:Salinity:Bottle, Chlorophyll:Extracted, Flag:Chlorophyll:Extracted, Phaeo-Pigment:Extracted, Oxygen:Dissolved, Flag:Oxygen:Dissolved, Temperature:Draw, Nitrate_plus_Nitrite, Flag:Nitrate_plus_Nitrite, Silicate, Flag:Silicate, Phosphate, Flag:Phosphate, Ammonium, Flag:Ammonium, pH, Flag:pH, Dimethyl_Sulphide, Flag:Dimethyl_Sulphide Primary file : P:\Cruise_Data_Processing\2012-12\processing\hydro\2012-12-0042.samavg Secondary file: P:\Cruise_Data_Processing\2012-12\processing\hydro\2012-12-0042.mrgcln1s -SORT parameters: 2012/08/16 07:53:49 Sorted in ascending order of channel Bottle_Number -CLEAN functions: 2012/08/17 08:46:09 20 Reset #RECS, MIN & MAX values in header. Remove Sea-Bird comments from the header. Remove remark heading: "Comments from secondary" -CALIB parameters: 2012/08/29 13:21:06 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2012-12\Processing\doc\2012-12-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 17 Salinity:T1:C1 PSS-78 10 0.1700000E-02 0.1000000E+01 -SORT parameters: 2012/08/29 13:21:21 Sorted in ascending order of channel Pressure [dbars] -REMOVECH 2012/08/29 13:21:52 The following CHANNEL(S) were removed: Scan_Number Temperature:Primary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Altimeter [metres] Status:Pump Descent_Rate [m/s] Salinity:T0:C0 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE' changed from mL/L to umol/kg -CHANGE units: - No units changed -HEADER EDITS: 2012/10/05 10:28:47 Applied edit header: P:\Cruise_Data_Processing\2012-12\Processing\doc\HYDRO\2012-12-bot-hdr.txt Channel 2: Bottle:Firing_Sequence [n/a] Name: Bottle_Number ==> Bottle:Firing_Sequence Channel 1: Bottle_Number [n/a] Name: Bottle:Position ==> Bottle_Number Channel 3: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 6: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs Channel 7: PAR [uE/m^2/sec] Format: F11.3 ==> F7.1 Channel 8: Salinity:Practical:T1:C1 [PSS-78] Name: Salinity:T1:C1 ==> Salinity:Practical:T1:C1 Channel 9: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 5: Fluorescence:URU:Seapoint [mg/m^3] Name: Fluorescence:Seapoint ==> Fluorescence:URU:Seapoint Format: F5.1 ==> F8.3 -The following MERGE parameters were used: 2012/10/09 15:20:28 2012/10/09 15:20:28 2012/10/09 15:20: Merge Channel: Pressure Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Transmissivity [%/metre] Primary file : P:\Cruise_Data_Processing\2012-12\Processing\fix\2012-12-0042.che1 Secondary file: P:\Cruise_Data_Processing\2012-12\Processing\fix\2012-12-0042.cln2 -SORT parameters: 2012/11/19 15:52:26 Sorted in ascending order of channel Bottle_Number -REMOVECH 2012/11/19 15:55:01 The following CHANNEL(S) were removed: Transmissivity [%/metre] Fluorescence:URU:Seapoint [mg/m^3] -The following MERGE parameters were used: 2012/11/19 16:27:25 2012/11/19 16:27:25 2012/11/19 16:27: Merge Channel: Bottle_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Transmissivity, Fluorescence:URU:Seapoint Primary file : P:\Cruise_Data_Processing\2012-12\Processing\fix\2012-12-0042.mrgrem Secondary file: P:\Cruise_Data_Processing\2012-12\Processing\fix\2012-12-0042.fltr -SORT parameters: 2012/11/19 16:30:07 Sorted in ascending order of channel Pressure -CALIB parameters: 2013/06/04 13:17:51 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = C:\DATA\Nutrients\doc\Nutrients-recal1.ccf WARNING: No calibration done on file C:\Data\Nutrients\2012-12\2012-12-0042.cor1 -HEADER EDITS: 2013/07/08 08:52:07 Applied edit header: C:\DATA\Nutrients\doc\headedit-correction.txt -HEADER EDITS: 2020/01/22 11:47:55 - none. $END *COMMENTS Analysis methods: ----------------- Chlorophyll samples were filtered onto 25mm GF/F filters and stored in glass scintillation vials at -20C prior to analysis. Samples were extracted in 90% acetone at -20C for 24 hours and analyzed on a Turner 10AU fluorometer which is calibrated annually with commercially pure chlorophyll a (Sigma). Fluorescence readings taken before and after acidification were used to calculate chlorophyll and phaeopigment concentrations (Holm-Hansen et al 1965). Chlorophyll samples were analyzed on board ship in a controlled temperature lab. The average of two samples is reported. Variability is assessed as the CV% (std dev / mean*100). For details see worksheet “CV%” in file QF2012-12_CHL-*.xls. Phaeopigment data are provided for information only and no quality flags are assigned to them. Oxygen samples were analyzed at sea on an automated Winkler titration system (Brinkmann Dosimat model 765 and a PC950 Colorimeter controlled by AutoOxy software V3.4) with modifications based on Carpenter (1965) and adhering to WOCE protocols (Culberson 1991). For details including a duplicate analysis, see document QF2012-12oxy*.xls. Salinity samples were collected in 200 mL type ll glass bottles with reusable silicone inserts supplied by Xiamen Cuten Accessories Industry Limited and screw caps supplied by Ocean Scientific International Limited. They were analyzed in a temperature-controlled lab on a Guildline 8400B Salinometer (S/N 68572) standardized with IAPSO standard seawater within 2 months after collection. Full details including a duplicate analysis are in file QF2012-12sal*.xls. Nutrient samples were collected in plastic tubes and analyzed at sea, except for the repeated P4 inbound samples. The repeated P4 inbound samples were frozen, or in the case of deep Silicate stored cool, and analyzed at IOs. All samples were analyzed using an Astoria analyzer following methods described in Barwell-Clarke and Whitney (1996). File QF2012-12nuts*.xls includes the raw data and a precision study. The minimum detectable level for DMS is 0.10 nM, so “0” values should be interpreted as <0.10. For details on the collection and analysis of the DMS data see file 2012-12 DMS Report.doc and for data see DMS 2012-12-DMS*.xls. References: 1. Barwell-Clarke, J. and Whitney, F. 1996. Institute of Ocean Sciences Nutrient Methods and Analysis. Canadian Technical Report of Hydrography and Ocean Sciences, No. 182, 43 pp. 2. Carpenter, J.H. 1965. The Chesapeake Bay Institute Technique for the Winkler Dissolved Oxygen Method. Limmnol. & Oceanogr., 10: 141-143. 3. Culberson, C.H. 1991. Dissolved oxygen. WOCE Hydrographic Programme Operations and Methods (July 1991). 15pp. 4. Holm-Hansen, O., Lorenzen, C.J., Holmes, R.W., and Strickland J.D.H. 1965. Fluorometric Determination of Chlorophyll. J.du Cons. Intl. Pour l’Epl. De la Mer. 30:3-15. * For PDF versions of these papers see folder \\Cruise_Data\DOCUMENTS\Analysis Reference Papers Data Processing Notes: ---------------------- Transmissivity, fluorescence and PAR data are nominal and unedited except that some records were removed in editing temperature and salinity. For details on how the transmissivity calibration parameters were calculated see the document in folder "\cruise_data\documents\transmissivity". SBE DO calibration was done using the method described in the SeaBird Application NOte #64-2. For further processing details see the processing report 2012-12-proc.doc. July 2013: A correction has been applied to Nitrate_plus_Nitrite and Phosphate data from deep-water cruises analyzed at IOS between 2009 and 2012. For details see the following report: Corrections to Nitrate and Phosphate for Deep-Water Cruises from 2009 to 2012.pdf which is stored in folder: \\Cruise_Data\DOCUMENTS\Analysis Reference Papers *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------- -------- ---- ------ ------------ Salinity:T1:C1 PSS-78 10 -99 () (0.17E-02 1) $END !1- 2- --3--- ---4---- --5-- ---6--- ---7--- --8--- ---9---- --10-- --11- -12- -13- !Bo Bo Pressu Temperat Trans Fluores Fluores PAR Salinity Oxygen Oxyge Numb Samp !tt tt re ure: missi cence: cence: :T1:C1 : n: er_o le_ !~u ~u Secondar vity URU: URU: Dissol Disso ~bin Numb !mb en y Seapoin Wetlabs ved: lved: _rec er !er ce t SBE SBE ords !-- -- ------ -------- ----- ------- ------- ------ -------- ------ ----- ---- ---- *END OF HEADER 12 12 2.7 7.8708 60.1 0.407 0.843 241.3 32.7151 6.97 303.2 43 343 13 13 2.8 7.8708 60.5 0.415 0.851 230.1 32.7150 6.97 303.4 41 344 14 14 2.8 7.8709 60.4 0.413 0.848 227.5 32.7150 6.96 303.0 42 345 17 17 2.8 7.8711 60.6 0.423 0.876 231.3 32.7150 6.97 303.2 41 348 19 19 2.8 7.8711 60.5 0.429 0.847 231.4 32.7151 6.97 303.4 61 350 11 11 2.9 7.8707 60.2 0.422 0.887 224.3 32.7151 6.97 303.2 46 342 18 18 3.0 7.8712 60.6 0.429 0.896 226.2 32.7150 6.96 303.1 39 349 20 20 3.0 7.8712 60.5 0.409 0.835 223.1 32.7151 6.97 303.4 241 351 16 16 3.1 7.8709 60.3 0.434 0.859 213.2 32.7151 6.97 303.3 43 347 10 10 3.3 7.8706 59.9 0.436 0.902 205.2 32.7151 6.96 303.2 46 341 15 15 3.3 7.8711 60.5 0.418 0.850 217.6 32.7151 6.97 303.2 44 346 9 9 10.7 7.8705 60.3 0.481 0.997 94.9 32.7152 6.96 303.2 241 340 7 7 17.1 7.8625 60.3 0.517 1.077 54.3 32.7150 6.97 303.6 51 338 8 8 17.4 7.8661 60.2 0.532 1.117 53.2 32.7149 6.97 303.6 241 339 6 6 26.8 7.6568 59.9 0.761 1.506 27.7 32.7128 7.03 305.9 241 337 4 4 36.6 7.4871 58.2 1.076 2.126 13.5 32.7134 7.05 306.9 54 335 5 5 36.6 7.4925 58.9 1.057 2.174 13.7 32.7129 7.05 307.0 241 336 3 3 44.5 7.0359 59.7 1.128 2.091 7.6 32.7207 7.11 309.6 241 334 2 2 67.2 6.6030 64.3 0.504 1.042 1.5 32.7379 6.97 303.1 241 333 1 1 67.4 6.6031 64.3 0.490 0.952 1.5 32.7376 6.96 302.9 63 332