*2024/04/15 16:24:38.06 *IOS HEADER VERSION 2.0 2016/04/28 2016/06/13 IVF16 *FILE START TIME : UTC 2011/05/16 12:11:57.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 13 DATA DESCRIPTION : Bottle:Rosette:Up:Stop + CTD:Up FILE TYPE : ASCII CRC : 2EC08EE7 NUMBER OF CHANNELS : 14 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- -------------------------- --------------- -------------- -------------- 1 Bottle_Number n/a 1 13 2 Bottle:Firing_Sequence n/a 1 13 3 Pressure decibar 1.882 316.785 4 Temperature:Secondary 'deg C (ITS90)' 8.3535 8.5133 5 Fluorescence:URU:Wetlabs mg/m^3 0.422 0.504 6 Salinity:T1:C1 PSS-78 29.5934 29.8354 7 Oxygen:Dissolved:SBE mL/L 5.734 5.831 8 Oxygen:Dissolved:SBE umol/kg 250.2 254.4 9 Number_of_bin_records n/a 241 241 10 Sample_Number n/a 74 86 11 Temperature:Draw 'deg C (ITS90)' 8.1 8.3 12 Oxygen:Dissolved mL/L 5.617 5.845 13 Oxygen:Dissolved umol/kg 245.0801 255.0293 14 Flag:Oxygen:Dissolved n/a $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 3 I I 0 2 -99 ' ' 3 I I 0 3 -99 ' ' 7 F ' ' 1 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 8 F ' ' 3 6 -99 ' ' 9 F ' ' 4 7 -99 ' ' 7 F ' ' 2 8 -99 ' ' 6 F ' ' 1 9 ' ' ' ' 5 I I 0 10 -99 ' ' 5 I I ' ' 11 -99 ' ' 6 F R4 1 12 -99 ' ' 8 F R4 3 13 -99 ' ' 6 F ' ' 1 14 0 ' ' 3 NQ C ' ' $END $REMARKS Flag channels initialized with zeros. Non-zero values have the following significance: -------------------------------------------------------------------------------------- 1 = Sample for this measurement was drawn from water bottle but not analyzed (not normally used). 2 = Acceptable measurement (not normally used). 3 = Questionable measurement (no problem observed in sampling or analysis, but value is not trusted, nonetheless; includes outlyers). 4 = Bad measurement (known problem with sampling or analysis, but not serious enough to completely discard the value). 5 = Not reported (lost sample; unredeemably bad measurement). 6 = Mean of replicate measurements. 7 = Manual chromatographic peak measurement. 8 = Irregular digital chromatographic peak integration. 9 = Sample not drawn for this measurement from this bottle (not normally used). -------------------------------------------------------------------------------------- $END *ADMINISTRATION MISSION : 2011-44 AGENCY : IOS, Ocean Sciences Division, Sidney, B.C. COUNTRY : Canada PROJECT : Aquaculture, La Perouse, Effingham etc. SCIENTIST : Juhasz T. PLATFORM : John P. Tully *LOCATION GEOGRAPHIC AREA : WCVI, BC Inlets, Discovery Passage STATION : JSDP EVENT NUMBER : 9 LATITUDE : 50 20.26000 N ! (deg min) LONGITUDE : 125 27.47000 W ! (deg min) WATER DEPTH : 335 ALTIMETER (M) : 8.99 ! custom item $REMARKS Altimeter value is distance from bottom and is calculated as the median of the deepest 2 metres of data. $END *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 585 $REMARKS SOFTWARE VERSION SEASAVE V 7.21B $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.1 2011/11/16 14:35:50 3133 3133 CLEAN 5.0.4 2011/11/16 14:37:05 ? ? ADDSAMP 3.5 2011/11/16 14:37:28 3133 3133 BINAVE 4.1.1 2011/11/16 14:37:50 3133 13 MERGE 3.4 2011/11/17 15:40:09 13 13 CLEAN 5.0.4 2011/11/17 16:15:34 13 13 CALIB 11.7 2011/11/21 15:13:12 13 13 SORT 3.5 2011/11/21 15:15:34 13 13 REMOVECH 8.1.1 2011/11/21 15:22:13 13 13 CHGUNITS 3.0 2011/11/21 15:22:36 13 13 CHGUNITS 3.0 2011/11/21 15:22:49 13 13 REORDER 1.3 2011/11/21 15:22:56 ? ? HDREDIT2 2.5.1 2011/11/21 15:25:33 ? ? CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:36:42 13 13 CHANGE_FLAGS 2.0 2014/11/20 09:57:53 13 13 HDREDIT2 3.2 2024/04/15 16:24:38 ? ? $END $REMARKS -CLEAN functions: 2011/11/16 14:36:59 20 Set event to last 4 characters of file name -The following ADDSAMP parameters were used: Sample Number Lookup File: P:\Cruise_Data_Processing\2011-44\Processing\hydro\addsamp.csv Bottle Channel Name: Bottle_Number -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -The following MERGE parameters were used: 2011/11/17 15:40:09 2011/11/17 15:40:09 2011/11/17 15:40: Merge Channel: Bottle_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Salinity:Bottle, Flag:Salinity:Bottle, Oxygen:Dissolved, Flag:Oxygen:Dissolved, Temperature:Draw, Nitrate_plus_Nitrite, Flag:Nitrate_plus_Nitrite, Silicate, Flag:Silicate, Phosphate, Flag:Phosphate Primary file : P:\Cruise_Data_Processing\2011-44\Processing\hydro\2011-44-0009.samavg Secondary file: P:\Cruise_Data_Processing\2011-44\Processing\hydro\2011-44-0009.mrgcln1s Comments from secondary file: P:\Cruise_Data_Processing\2011-44\Processing\hydro\2011-44-0009.mrgcln1s ------------------------------------------------------------------------ -SORT parameters: 2011/11/17 15:39:55 Sorted in ascending order of channel Bottle_Number -CLEAN functions: 2011/11/17 16:15:34 20 Reset #RECS, MIN & MAX values in header. Remove Sea-Bird comments from the header. -CALIB parameters: 2011/11/21 15:13:12 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = P:\Cruise_Data_Processing\2011-44\Processing\doc\2011-44-recal.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 9 Fluorescence:Wetlabs:ECO-AFL mg/m^3 10 0.3600000E-01 0.1000000E+01 -SORT parameters: 2011/11/21 15:15:34 Sorted in ascending order of channel Pressure [dbars] -REMOVECH 2011/11/21 15:22:13 The following CHANNEL(S) were removed: Scan_Number Temperature:Primary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Transmissivity [%/metre] Oxygen:Voltage:SBE [volts] Altimeter [metres] Status:Pump Descent_Rate [m/s] Salinity:T0:C0 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -CHANGE units: 'Oxygen:Dissolved' changed from mL/L to umol/kg -HEADER EDITS: 2011/11/21 15:25:33 Applied edit header: P:\Cruise_Data_Processing\2011-44\Processing\doc\2011-44-bot-hdr.txt Channel 2: Bottle:Firing_Sequence [n/a] Name: Bottle_Number ==> Bottle:Firing_Sequence Channel 3: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 1: Bottle_Number [n/a] Name: Bottle:Position ==> Bottle_Number Channel 1: Bottle_Number [n/a] Name: Bottle:Position ==> Bottle_Number Channel 7: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 12: Oxygen:Dissolved [mL/L] Units: ==> mL/L Channel 11: Temperature:Draw [deg C (ITS90)] Format: F9.4 ==> F5.1 Channel 8: Oxygen:Dissolved:SBE [umol/kg] Format: F6.2 ==> F6.1 Channel 13: Oxygen:Dissolved [umol/kg] Format: F6.2 ==> F6.1 Channel 5: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs -HEADER EDITS: 2024/04/15 16:24:38 Channel 11: Temperature:Draw [deg C (ITS90)] Format: F5.1 ==> F6.1 $END *COMMENTS Comments from secondary file: P:\Cruise_Data_Processing\2011-44\Processing\hydro\2011-44-0009.mrgcln1s ------------------------------------------------------------------------ Comments from secondary file: P:\Cruise_Data_Processing\2011-44\Processing\hydro\2011-44-0009.oxy ------------------------------------------------------------------- Sample_Number 74: OXY: Curve does not flatten, unreliable endpoint; outlier in comparison of CTD and bottles. Analysis methods: ----------------- Oxygen samples were analyzed at sea using an automated Winkler titration system (Brinkmann Dosimat model 765 and a PC950 Colorimeter controlled by AutoOxy software V3.4) with modifications based on Carpenter (1965) and adhering to WOCE protocols (Culberson 1991). For details including a duplicate analysis, see document 2011-44oxy*.xls. Salinity samples were collected in glass bottles and analyzed on Guildline Autosal model 8400B, S/N 68572, at IOS. Salinometers are standardized with IAPSO standard seawater. Full results are in file 2011-44-sal*.xls. Nutrient samples were collected in plastic tubes. Samples were stored frozen and later analysed at IOS. An Astoria analyzer was used following methods described in Barwell-Clarke and Whitney (1996). File "QF 2011-44nuts*.xls" includes the raw data and a precision study. References: 1. Barwell-Clarke, J. and Whitney, F. 1996. Institute of Ocean Sciences Nutrient Methods and Analysis. Canadian Technical Report of Hydrography and Ocean Sciences, No. 182, 43 pp. 2. Carpenter, J.H. 1965. The Chesapeake Bay Institute Technique for the Winkler Dissolved Oxygen Method. Limmnol. & Oceanogr., 10: 141-143. 3. Culberson, C.H. 1991. Dissolved oxygen. WOCE Hydrographic Programme Operations and Methods (July 1991). 15pp. 4. Holm-Hansen, O., Lorenzen, C.J., Holmes, R.W., and Strickland J.D.H. 1965. Fluorometric Determination of Chlorophyll. J.du Cons. Intl. Pour l’Epl. De la Mer. 30:3-15. * For PDF versions of these papers see folder \\Cruise_Data\DOCUMENTS\Analysis Reference Papers Data Processing Notes: ---------------------- Transmissivity and SBE Fluorescence data are nominal and unedited. Transmissivity was removed from casts #1-9 because there was no signal. For details on how the transmissivity calibration parameters were calculated see the document in folder "\cruise_data\documents\transmissivity". SBE DO calibration was done using the method described in the SeaBird Application NOte #64-2. For further processing details see the processing report 2011-44-proc.doc. *CALIBRATION $TABLE: CORRECTED CHANNELS !Name Units Fmla Pad Coefficients !------------------------------ -------- ---- ------ ------------ Fluorescence:Wetlabs:ECO-AFL mg/m^3 10 -99 () (0.36E-01 1) $END !1- 2- --3--- ---4---- ---5--- ---6---- --7--- --8-- -9-- -10- --11- ---12-- --13- 14 !Bo Bo Pressu Temperat Fluores Salinity Oxygen Oxyge Numb Samp Tempe Oxygen: Oxyge Fl !tt tt re ure: cence: :T1:C1 : n: er_o le_ ratur Dissolv n: ag !~u ~u Secondar URU: Dissol Disso ~bin Numb e: ed Disso ~o !mb en y Wetlabs ved: lved: _rec er Draw lved lv !er ce SBE SBE ords ed !-- -- ------ -------- ------- -------- ------ ----- ---- ---- ----- ------- ----- -- *END OF HEADER 13 13 1.9 8.4967 0.502 29.6109 5.73 250.2 241 86 8.3 5.818 253.9 0 12 12 10.4 8.5006 0.501 29.6062 5.76 251.2 241 85 8.3 5.809 253.5 0 11 11 20.4 8.4913 0.469 29.6190 5.75 250.8 241 84 8.3 5.798 253.0 0 10 10 30.4 8.5133 0.496 29.5934 5.78 252.0 241 83 8.3 5.826 254.3 0 9 9 50.2 8.4827 0.485 29.6331 5.77 251.8 241 82 8.3 5.809 253.5 6 8 8 74.1 8.4145 0.422 29.7244 5.82 253.9 241 81 8.2 5.812 253.6 0 7 7 100.5 8.4350 0.487 29.7015 5.82 254.1 241 80 8.2 5.810 253.5 0 6 6 125.2 8.3806 0.440 29.7747 5.82 254.0 241 79 8.2 5.826 254.2 0 5 5 150.9 8.3822 0.504 29.7751 5.82 253.8 241 78 8.1 5.823 254.1 0 4 4 174.0 8.3562 0.451 29.8145 5.82 254.0 241 77 8.1 5.834 254.6 0 3 3 200.8 8.3568 0.446 29.8171 5.82 254.0 241 76 8.1 5.835 254.6 0 2 2 251.0 8.3535 0.483 29.8290 5.82 254.0 241 75 8.1 5.845 255.0 0 1 1 316.8 8.3554 0.458 29.8354 5.83 254.4 241 74 8.1 5.617 245.1 4