*2023/03/19 10:46:33.34 *IOS HEADER VERSION 2.0 2016/04/28 2016/06/13 IVF16 *FILE START TIME : UTC 2011/08/11 20:03:52.000 TIME INCREMENT : 0 0 0 1 0 ! (day hr min sec ms) NUMBER OF RECORDS : 7 DATA DESCRIPTION : Bottle:Rosette:Up:Stop + CTD:Up FILE TYPE : ASCII CRC : 40C0637B NUMBER OF CHANNELS : 23 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Bottle_Number n/a 1 7 2 Bottle:Firing_Sequence n/a 1 7 3 Pressure decibar 2.1 36.6 4 Temperature:Secondary 'deg C (ITS90)' 10.478 17.6615 5 Transmissivity %/metre 34.5 54.6 6 Fluorescence:URU:Wetlabs mg/m^3 0.455 4.388 7 Salinity:T1:C1 PSS-78 23.6189 28.1912 8 Oxygen:Dissolved:SBE mL/L 3.92 6.66 9 Oxygen:Dissolved:SBE umol/kg 171.5 292.4 10 Number_of_bin_records n/a 9 11 11 Sample_Number n/a 132 138 12 Temperature:Draw 'deg C (ITS90)' 10.5 17.8 13 Salinity:Bottle PSS-78 25.1955 25.1955 14 Flag:Salinity:Bottle n/a 15 Oxygen:Dissolved mL/L 4.031 6.74 16 Oxygen:Dissolved umol/kg 176.2 296 17 Flag:Oxygen:Dissolved n/a 18 Nitrate_plus_Nitrite umol/L 2.2 24.4 19 Flag:Nitrate_plus_Nitrite n/a 20 Phosphate umol/L 0.48 2.25 21 Flag:Phosphate n/a 22 Silicate umol/L 35.77724 56.3 23 Silicate:Flag n/a $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 3 I I 0 2 -99 ' ' 3 I I 0 3 -99 ' ' 7 F ' ' 1 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 6 F ' ' 1 6 -99 ' ' 8 F ' ' 3 7 -99 ' ' 9 F ' ' 4 8 -99 ' ' 7 F ' ' 2 9 -99 ' ' 6 F ' ' 1 10 ' ' ' ' 5 I I 0 11 -99 ' ' 5 I I 0 12 -99 ' ' 5 F R4 1 13 -99 ' ' 9 F R4 4 14 0 ' ' 3 NQ C ' ' 15 -99 ' ' 8 F R4 3 16 -99 ' ' 6 F ' ' 1 17 0 ' ' 3 NQ C ' ' 18 -99 ' ' 6 F R4 1 19 0 ' ' 3 NQ C ' ' 20 -99 ' ' 7 F R4 2 21 0 ' ' 3 NQ C ' ' 22 -99 ' ' 6 F R4 1 23 0 ' ' 3 NQ C ' ' $END $REMARKS Flag channels initialized with zeros. Non-zero values have the following significance: -------------------------------------------------------------------------------------- 1 = Sample for this measurement was drawn from water bottle but not analyzed (not normally used). 2 = Acceptable measurement (not normally used). 3 = Questionable measurement (no problem observed in sampling or analysis, but value is not trusted, nonetheless; includes outlyers). 4 = Bad measurement (known problem with sampling or analysis, but not serious enough to completely discard the value). 5 = Not reported (lost sample; unredeemably bad measurement). 6 = Mean of replicate measurements. 7 = Manual chromatographic peak measurement. 8 = Irregular digital chromatographic peak integration. 9 = Sample not drawn for this measurement from this bottle (not normally used). -------------------------------------------------------------------------------------- $END *ADMINISTRATION MISSION : 2011-25 AGENCY : 'WVL, Marine Environment and Habitat Science,' CONTINUED : ' Vancouver, B.C.' COUNTRY : Canada PROJECT : Aquaculture - Environment Interactions SCIENTIST : Sutherland T. PLATFORM : Vector *LOCATION GEOGRAPHIC AREA : Strait of Georgia STATION : BS20 EVENT NUMBER : 59 LATITUDE : 49 28.33000 N ! (deg min) LONGITUDE : 124 44.90000 W ! (deg min) WATER DEPTH : 35 ALTIMETER (M) : 3.71 ! custom item $REMARKS Altimeter value is distance from bottom and is calculated as the median of the deepest 2 metres of data. $END *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0443 $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.1.1 2012/04/24 10:30:43 75 75 CLEAN 5.0.4 2012/04/24 10:31:00 ? ? ADDSAMP 3.5 2012/04/24 11:46:12 75 75 BINAVE 4.1.1 2012/04/24 11:46:16 75 7 MERGE 3.4 2012/04/26 12:17:06 7 7 CLEAN 5.0.4 2012/04/26 12:17:27 7 7 SORT 3.5 2012/04/26 16:54:17 7 7 REMOVECH 8.1.1 2012/04/26 16:54:56 7 7 CHGUNITS 3.0 2012/04/26 16:56:19 7 7 CHGUNITS 3.0 2012/04/26 16:57:27 7 7 REORDER 1.3 2012/04/26 16:59:06 ? ? HDREDIT2 2.5.1 2012/04/26 17:04:41 ? ? CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:36:14 7 7 CHANGE_FLAGS 2.0 2014/11/20 09:57:43 7 7 Silicate_Correction 1.0 2018/02/20 14:43:41 7 7 Silicate_Modification 1.2 2023/03/19 10:46:33 7 7 $END $REMARKS -CLEAN functions: 2012/04/24 10:30:59 20 Set event to last 4 characters of file name -The following ADDSAMP parameters were used: Sample Number Lookup File: P:\Cruise_Data_Processing\2011-25\Processing\hydro\addsamp.csv Bottle Channel Name: Bottle_Number -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -The following MERGE parameters were used: 2012/04/26 12:17:05 2012/04/26 12:17:05 2012/04/26 12:17: Merge Channel: Bottle_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Event_Number, Bottle:Position, Salinity:Bottle, Flag:Salinity:Bottle, Chlorophyll:Extracted, Flag:Chlorophyll:Extracted, Phaeo-Pigment:Extracted, Oxygen:Dissolved, Flag:Oxygen:Dissolved, Temperature:Draw, Nitrate_plus_Nitrite, Flag:Nitrate_plus_Nitrite, Silicate, Flag:Silicate, Phosphate, Flag:Phosphate, Ammonium, Flag:Ammonium, pH, Flag:pH, Dimethyl_Sulphide, Flag:Dimethyl_Sulphide Primary file : P:\Cruise_Data_Processing\2011-25\Processing\hydro\2011-25-0059.samavg Secondary file: P:\Cruise_Data_Processing\2011-25\Processing\hydro\2011-25-0059.mrgcln1s -SORT parameters: 2012/04/23 16:17:37 Sorted in ascending order of channel Bottle_Number -CLEAN functions: 2012/04/26 12:17:26 20 Reset #RECS, MIN & MAX values in header. Remove Sea-Bird comments from the header. Remove remark heading: "Comments from secondary" -SORT parameters: 2012/04/26 16:54:17 Sorted in ascending order of channel Pressure [dbars] -REMOVECH 2012/04/26 16:54:56 The following CHANNEL(S) were removed: Scan_Number Temperature:Primary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] pH:SBE [pH Units] Altimeter [metres] Status:Pump Descent_Rate [m/s] Salinity:T0:C0 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE' changed from mL/L to umol/kg -CHANGE units: 'Oxygen:Dissolved' changed from mL/L to umol/kg -HEADER EDITS: 2012/04/26 17:04:41 Applied edit header: P:\Cruise_Data_Processing\2011-25\Processing\doc\2011-25-bot-hdr.txt Channel 2: Bottle:Firing_Sequence [n/a] Name: Bottle_Number ==> Bottle:Firing_Sequence Channel 1: Bottle_Number [n/a] Name: Bottle:Position ==> Bottle_Number Channel 3: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 6: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs Channel 7: Salinity:Practical:T1:C1 [PSS-78] Name: Salinity:T1:C1 ==> Salinity:Practical:T1:C1 Channel 8: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 12: Temperature:Draw [deg C (ITS90)] Units: ==> deg C (ITS90) Channel 14: Flag:Salinity:Bottle [n/a] Units: ==> n/a Channel 15: Oxygen:Dissolved [mL/L] Units: mg/m^3 ==> mL/L Format: F7.3 ==> F8.3 Channel 17: Flag:Oxygen:Dissolved [n/a] Units: ==> n/a Channel 18: Nitrate_plus_Nitrite [umol/L] Units: ==> umol/L Channel 19: Flag:Nitrate_plus_Nitrite [n/a] Units: ==> n/a Channel 20: Silicate [umol/L] Units: ==> umol/L Format: F7.2 ==> F6.1 Channel 21: Flag:Silicate [n/a] Units: ==> n/a Channel 22: Phosphate [umol/L] Units: ==> umol/L Channel 23: Flag:Phosphate [n/a] Units: ==> n/a $END *COMMENTS ===================================================================================== Silicate correction was applied after the original processing. 2023/03/19 ------------------------------------------------------------------------------------- Silicate data has been adjusted to account for salinity effect and analysis on the Water Properties Group Astoria Pacific continuous flow nutrient analyser. Adjustment was made for salinity values (when available) of <= 25 psu. Adjustment equation: Silicate:Corrected = Silicate * [1+((-0.003)*(32-S))] where, Silicate:Corrected = corrected silicate concentration in micromoles/litre Silicate = uncorrected silicate concentration in micromoles/litre -0.003 = salt correction factor 32 = salt concentration of artificial seawater used by the WPG Astoria Pacific continuous flow analyser S = salinity of the sample At Station: BS20, Sample Number: 138, Silicate corrected using CTD salinity. ===================================================================================== Sample_Number 133: OXY: Bubbles in Thio line. Flushed out after this sample. Sample_Number 137: OXY: Replicate outlier (rejected value 5.797 which had a bubble - check after COMPARE) Analysis methods: ----------------- Oxygen samples were analyzed at sea using an automated Winkler titration system (Brinkmann Dosimat model 765 and a PC950 Colorimeter controlled by AutoOxy software V3.4) with modifications based on Carpenter (1965) and adhering to WOCE protocols (Culberson 1991). For details including a duplicate analysis, see document QF2011-25oxy*.xls. Salinity samples were collected in glass bottles and analyzed on Guildline Autosal model 8400B, S/N 68572, at IOS within a month of collection. Salinometers are standardized with IAPSO standard seawater. Full results are in file 2011-25-sal*.xls. Nutrient samples were collected in 15mL plastic tubes and frozen and later analysed at IOS using an Astoria analyzer following methods described in Barwell-Clarke and Whitney (1996). For details including a duplicate analysis see file QF 2011-25nuts*.xls. References: 1. Barwell-Clarke, J. and Whitney, F. 1996. Institute of Ocean Sciences Nutrient Methods and Analysis. Canadian Technical Report of Hydrography and Ocean Sciences, No. 182, 43 pp. 2. Carpenter, J.H. 1965. The Chesapeake Bay Institute Technique for the Winkler Dissolved Oxygen Method. Limmnol. & Oceanogr., 10: 141-143. 3. Culberson, C.H. 1991. Dissolved oxygen. WOCE Hydrographic Programme Operations and Methods (July 1991). 15pp. 4. Holm-Hansen, O., Lorenzen, C.J., Holmes, R.W., and Strickland J.D.H. 1965. Fluorometric Determination of Chlorophyll. J.du Cons. Intl. Pour l’Epl. De la Mer. 30:3-15. * For PDF versions of these papers see folder \\Cruise_Data\DOCUMENTS\Analysis Reference Papers Data Processing Notes: ---------------------- Transmissivity and SBE Fluorescence data are nominal and unedited. The SBE data are considered of lower quality than normal because 24 scans were averaged in acquisition. These averages may contain spikes that would normally be removed in processing and might be systematic in nature. The pH data have been removed as they are not considered suitable for archiving. For details on how the transmissivity calibration parameters were calculated see the document in folder "\cruise_data\documents\transmissivity". SBE DO calibration was done using the method described in the SeaBird Application NOte #64-2. For further processing details see the processing report 2011-25-proc.doc. !1- 2- --3--- ---4---- --5-- ---6--- ---7---- --8--- --9-- -10- -11- -12- ---13--- 14 ---15-- --16- 17 --18- 19 --20-- 21 --22- 23 !Bo Bo Pressu Temperat Trans Fluores Salinity Oxygen Oxyge Numb Samp Temp Salinity Fl Oxygen: Oxyge Fl Nitra Fl Phosph Fl Silic Si !tt tt re ure: missi cence: :T1:C1 : n: er_o le_ erat :Bottle ag Dissolv n: ag te_ ag ate ag ate li !~u ~u Secondar vity URU: Dissol Disso ~bin Numb ure: ~o ed Disso ~o plus_ ~t ~p ~: !mb en y Wetlabs ved: lved: _rec er Draw tt lved lv Nitri ri ha Fl !er ce SBE SBE ords le ed te te te ag !-- -- ------ -------- ----- ------- -------- ------ ----- ---- ---- ---- -------- -- ------- ----- -- ----- -- ------ -- ----- -- *END OF HEADER 7 7 2.1 17.6615 34.5 4.338 23.6189 6.66 292.4 9 138 17.8 -99.0000 0 6.740 296.0 0 2.2 0 0.48 0 35.8 0 6 6 4.4 16.4778 37.8 4.388 24.3405 6.19 271.6 11 137 15.1 25.1955 0 5.867 257.4 3 8.4 0 1.02 0 41.1 0 5 5 9.7 13.1901 48.3 3.405 26.4221 4.86 212.9 11 136 11.9 -99.0000 0 4.689 205.2 0 19.0 0 1.59 0 52.3 0 4 4 25.1 10.9876 54.5 0.719 27.8448 4.04 176.8 11 135 10.9 -99.0000 0 4.298 187.9 0 22.5 0 1.79 0 55.3 0 3 3 34.0 10.6499 54.6 0.530 28.0691 3.95 172.8 11 134 10.5 -99.0000 0 4.031 176.2 0 23.8 0 2.20 0 56.3 0 2 2 34.1 10.5800 54.3 0.503 28.1200 3.95 172.6 11 133 10.5 -99.0000 0 4.033 176.3 3 24.1 0 2.10 0 55.7 0 1 1 36.6 10.4780 54.0 0.455 28.1912 3.92 171.5 11 132 10.6 -99.0000 0 4.176 182.5 0 24.4 0 2.25 0 56.3 0