*2014/11/20 09:57:43.15 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2011/08/10 19:06:31.000 TIME INCREMENT : 0 0 0 1 0 ! (day hr min sec ms) NUMBER OF RECORDS : 8 DATA DESCRIPTION : Bottle:Rosette:Up:Stop + CTD:Up FILE TYPE : ASCII CRC : B308AA81 NUMBER OF CHANNELS : 21 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Bottle_Number n/a 1 8 2 Bottle:Firing_Sequence n/a 1 8 3 Pressure decibar 2.032 305.494 4 Temperature:Secondary 'deg C (ITS90)' 9.7799 10.1255 5 Transmissivity %/metre 47.5 54.4 6 Fluorescence:URU:Wetlabs mg/m^3 0.22 0.752 7 Salinity:T1:C1 PSS-78 28.2708 29.5559 8 Oxygen:Dissolved:SBE mL/L 4.29 4.51 9 Oxygen:Dissolved:SBE umol/kg 187.4 197.1 10 Number_of_bin_records n/a 11 11 11 Sample_Number n/a 82 89 12 Temperature:Draw 'deg C (ITS90)' 9.6 9.9 13 Oxygen:Dissolved mL/L 4.317 4.563 14 Oxygen:Dissolved umol/kg 188.5606 199.3751 15 Flag:Oxygen:Dissolved n/a 16 Nitrate_plus_Nitrite umol/L 24.3 26.3 17 Flag:Nitrate_plus_Nitrite n/a 18 Silicate umol/L 45.8 52.5 19 Flag:Silicate n/a 20 Phosphate umol/L 2.01 2.19 21 Flag:Phosphate n/a $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 3 I I 0 2 -99 ' ' 3 I I 0 3 -99 ' ' 7 F ' ' 1 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 6 F ' ' 1 6 -99 ' ' 8 F ' ' 3 7 -99 ' ' 9 F ' ' 4 8 -99 ' ' 7 F ' ' 2 9 -99 ' ' 6 F ' ' 1 10 ' ' ' ' 5 I I 0 11 -99 ' ' 5 I I 0 12 -99 ' ' 5 F R4 1 13 -99 ' ' 8 F R4 3 14 -99 ' ' 6 F ' ' 1 15 0 ' ' 3 NQ C ' ' 16 -99 ' ' 6 F R4 1 17 0 ' ' 3 NQ C ' ' 18 -99 ' ' 6 F R4 1 19 0 ' ' 3 NQ C ' ' 20 -99 ' ' 7 F R4 2 21 0 ' ' 3 NQ C ' ' $END $REMARKS Flag channels initialized with zeros. Non-zero values have the following significance: -------------------------------------------------------------------------------------- 1 = Sample for this measurement was drawn from water bottle but not analyzed (not normally used). 2 = Acceptable measurement (not normally used). 3 = Questionable measurement (no problem observed in sampling or analysis, but value is not trusted, nonetheless; includes outlyers). 4 = Bad measurement (known problem with sampling or analysis, but not serious enough to completely discard the value). 5 = Not reported (lost sample; unredeemably bad measurement). 6 = Mean of replicate measurements. 7 = Manual chromatographic peak measurement. 8 = Irregular digital chromatographic peak integration. 9 = Sample not drawn for this measurement from this bottle (not normally used). -------------------------------------------------------------------------------------- $END *ADMINISTRATION MISSION : 2011-25 AGENCY : 'WVL, Marine Environment and Habitat Science,' CONTINUED : ' Vancouver, B.C.' COUNTRY : Canada PROJECT : Aquaculture - Environment Interactions SCIENTIST : Sutherland T. PLATFORM : Vector *LOCATION GEOGRAPHIC AREA : Strait of Georgia STATION : NC13 EVENT NUMBER : 14 LATITUDE : 50 26.95000 N ! (deg min) LONGITUDE : 125 18.07000 W ! (deg min) WATER DEPTH : 308 ALTIMETER (M) : 4.03 ! custom item $REMARKS Altimeter value is distance from bottom and is calculated as the median of the deepest 2 metres of data. $END *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0443 $REMARKS SOFTWARE VERSION SEASAVE V 7.21D $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.1.1 2012/04/24 10:30:42 88 88 CLEAN 5.0.4 2012/04/24 10:31:00 ? ? ADDSAMP 3.5 2012/04/24 11:46:12 88 88 BINAVE 4.1.1 2012/04/24 11:46:16 88 8 MERGE 3.4 2012/04/26 12:17:06 8 8 CLEAN 5.0.4 2012/04/26 12:17:27 8 8 SORT 3.5 2012/04/26 16:54:17 8 8 REMOVECH 8.1.1 2012/04/26 16:54:56 8 8 CHGUNITS 3.0 2012/04/26 16:56:19 8 8 CHGUNITS 3.0 2012/04/26 16:57:27 8 8 REORDER 1.3 2012/04/26 16:59:05 ? ? HDREDIT2 2.5.1 2012/04/26 17:04:41 ? ? CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:36:14 8 8 CHANGE_FLAGS 2.0 2014/11/20 09:57:43 8 8 $END $REMARKS -CLEAN functions: 2012/04/24 10:30:59 20 Set event to last 4 characters of file name -The following ADDSAMP parameters were used: Sample Number Lookup File: P:\Cruise_Data_Processing\2011-25\Processing\hydro\addsamp.csv Bottle Channel Name: Bottle_Number -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -The following MERGE parameters were used: 2012/04/26 12:17:05 2012/04/26 12:17:05 2012/04/26 12:17: Merge Channel: Bottle_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Event_Number, Bottle:Position, Salinity:Bottle, Flag:Salinity:Bottle, Chlorophyll:Extracted, Flag:Chlorophyll:Extracted, Phaeo-Pigment:Extracted, Oxygen:Dissolved, Flag:Oxygen:Dissolved, Temperature:Draw, Nitrate_plus_Nitrite, Flag:Nitrate_plus_Nitrite, Silicate, Flag:Silicate, Phosphate, Flag:Phosphate, Ammonium, Flag:Ammonium, pH, Flag:pH, Dimethyl_Sulphide, Flag:Dimethyl_Sulphide Primary file : P:\Cruise_Data_Processing\2011-25\Processing\hydro\2011-25-0014.samavg Secondary file: P:\Cruise_Data_Processing\2011-25\Processing\hydro\2011-25-0014.mrgcln1s -SORT parameters: 2012/04/23 16:17:37 Sorted in ascending order of channel Bottle_Number -CLEAN functions: 2012/04/26 12:17:26 20 Reset #RECS, MIN & MAX values in header. Remove Sea-Bird comments from the header. Remove remark heading: "Comments from secondary" -SORT parameters: 2012/04/26 16:54:17 Sorted in ascending order of channel Pressure [dbars] -REMOVECH 2012/04/26 16:54:56 The following CHANNEL(S) were removed: Scan_Number Temperature:Primary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] pH:SBE [pH Units] Altimeter [metres] Status:Pump Descent_Rate [m/s] Salinity:T0:C0 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE' changed from mL/L to umol/kg -CHANGE units: 'Oxygen:Dissolved' changed from mL/L to umol/kg -HEADER EDITS: 2012/04/26 17:04:41 Applied edit header: P:\Cruise_Data_Processing\2011-25\Processing\doc\2011-25-bot-hdr.txt Channel 2: Bottle:Firing_Sequence [n/a] Name: Bottle_Number ==> Bottle:Firing_Sequence Channel 1: Bottle_Number [n/a] Name: Bottle:Position ==> Bottle_Number Channel 3: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 6: Fluorescence:URU:Wetlabs [mg/m^3] Name: Fluorescence:Wetlabs:ECO-AFL ==> Fluorescence:URU:Wetlabs Channel 7: Salinity:Practical:T1:C1 [PSS-78] Name: Salinity:T1:C1 ==> Salinity:Practical:T1:C1 Channel 8: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 12: Temperature:Draw [deg C (ITS90)] Units: ==> deg C (ITS90) Channel 13: Oxygen:Dissolved [mL/L] Units: mg/m^3 ==> mL/L Format: F7.3 ==> F8.3 Channel 15: Flag:Oxygen:Dissolved [n/a] Units: ==> n/a Channel 16: Nitrate_plus_Nitrite [umol/L] Units: ==> umol/L Channel 17: Flag:Nitrate_plus_Nitrite [n/a] Units: ==> n/a Channel 18: Silicate [umol/L] Units: ==> umol/L Format: F7.2 ==> F6.1 Channel 19: Flag:Silicate [n/a] Units: ==> n/a Channel 20: Phosphate [umol/L] Units: ==> umol/L Channel 21: Flag:Phosphate [n/a] Units: ==> n/a $END *COMMENTS Sample_Number 82: OXY: Replicate Outlier (rejected value 4.408 debris in sample but check in COMPARE.) Analysis methods: ----------------- Oxygen samples were analyzed at sea using an automated Winkler titration system (Brinkmann Dosimat model 765 and a PC950 Colorimeter controlled by AutoOxy software V3.4) with modifications based on Carpenter (1965) and adhering to WOCE protocols (Culberson 1991). For details including a duplicate analysis, see document QF2011-25oxy*.xls. Salinity samples were collected in glass bottles and analyzed on Guildline Autosal model 8400B, S/N 68572, at IOS within a month of collection. Salinometers are standardized with IAPSO standard seawater. Full results are in file 2011-25-sal*.xls. Nutrient samples were collected in 15mL plastic tubes and frozen and later analysed at IOS using an Astoria analyzer following methods described in Barwell-Clarke and Whitney (1996). For details including a duplicate analysis see file QF 2011-25nuts*.xls. References: 1. Barwell-Clarke, J. and Whitney, F. 1996. Institute of Ocean Sciences Nutrient Methods and Analysis. Canadian Technical Report of Hydrography and Ocean Sciences, No. 182, 43 pp. 2. Carpenter, J.H. 1965. The Chesapeake Bay Institute Technique for the Winkler Dissolved Oxygen Method. Limmnol. & Oceanogr., 10: 141-143. 3. Culberson, C.H. 1991. Dissolved oxygen. WOCE Hydrographic Programme Operations and Methods (July 1991). 15pp. 4. Holm-Hansen, O., Lorenzen, C.J., Holmes, R.W., and Strickland J.D.H. 1965. Fluorometric Determination of Chlorophyll. J.du Cons. Intl. Pour l’Epl. De la Mer. 30:3-15. * For PDF versions of these papers see folder \\Cruise_Data\DOCUMENTS\Analysis Reference Papers Data Processing Notes: ---------------------- Transmissivity and SBE Fluorescence data are nominal and unedited. The SBE data are considered of lower quality than normal because 24 scans were averaged in acquisition. These averages may contain spikes that would normally be removed in processing and might be systematic in nature. The pH data have been removed as they are not considered suitable for archiving. For details on how the transmissivity calibration parameters were calculated see the document in folder "\cruise_data\documents\transmissivity". SBE DO calibration was done using the method described in the SeaBird Application NOte #64-2. For further processing details see the processing report 2011-25-proc.doc. !1- 2- --3--- ---4---- --5-- ---6--- ---7---- --8--- --9-- -10- -11- -12- ---13-- --14- 15 --16- 17 --18- 19 --20-- 21 !Bo Bo Pressu Temperat Trans Fluores Salinity Oxygen Oxyge Numb Samp Temp Oxygen: Oxyge Fl Nitra Fl Silic Fl Phosph Fl !tt tt re ure: missi cence: :T1:C1 : n: er_o le_ erat Dissolv n: ag te_ ag ate ag ate ag !~u ~u Secondar vity URU: Dissol Disso ~bin Numb ure: ed Disso ~o plus_ ~t ~i ~p !mb en y Wetlabs ved: lved: _rec er Draw lved lv Nitri ri ca ha !er ce SBE SBE ords ed te te te te !-- -- ------ -------- ----- ------- -------- ------ ----- ---- ---- ---- ------- ----- -- ----- -- ----- -- ------ -- *END OF HEADER 8 8 2.0 10.1255 47.5 0.447 28.2708 4.51 197.1 11 89 9.9 4.563 199.4 0 24.3 0 50.4 0 2.05 0 7 7 10.4 9.9555 47.9 0.672 28.4630 4.40 192.4 11 88 9.7 4.451 194.4 0 25.6 0 51.7 0 2.13 0 6 6 20.9 9.8338 51.1 0.752 28.5595 4.33 189.0 11 87 9.6 4.366 190.7 0 26.0 0 52.5 0 2.16 0 5 5 30.0 9.8125 50.2 0.683 28.6079 4.32 188.6 11 86 9.6 4.338 189.5 0 25.4 0 50.7 0 2.14 0 4 4 50.0 9.7799 51.0 0.641 28.6686 4.29 187.4 11 85 9.6 4.317 188.6 0 26.3 0 52.1 0 2.19 0 3 3 100.0 9.9215 51.6 0.339 29.0492 4.33 189.0 11 84 9.7 4.378 191.2 0 25.5 0 49.4 0 2.10 0 2 2 150.2 9.9586 54.4 0.220 29.3151 4.36 190.3 11 83 9.8 4.411 192.6 0 24.3 0 45.8 0 2.01 0 1 1 305.5 9.9691 47.5 0.278 29.5559 4.41 192.5 11 82 9.9 4.473 195.3 3 25.0 0 47.0 0 2.07 0