*2014/11/20 09:57:28.43 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2010/09/21 20:53:03.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 9 DATA DESCRIPTION : Bottle:Rosette:Up:Stop + CTD:Up FILE TYPE : ASCII CRC : A3840C50 NUMBER OF CHANNELS : 15 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Bottle_Number n/a 1 9 2 Bottle:Firing_Sequence n/a 1 9 3 Pressure decibar 1.824 145.719 4 Temperature:Secondary 'deg C (ITS90)' 8.1917 13.2896 5 Transmissivity %/metre 24.4 58 6 Fluorescence:URU:Seapoint mg/m^3 0.38E-01 1.528 7 Salinity:T1:C1 PSS-78 29.9801 32.8518 8 Oxygen:Dissolved:SBE mL/L 1.214 5.346 9 Oxygen:Dissolved:SBE umol/kg 52.8478 233.4199 10 Number_of_bin_records n/a 241 241 11 Sample_Number n/a 156 164 12 Salinity:Bottle PSS-78 32.812 32.812 13 Flag:Salinity:Bottle n/a 14 Oxygen:Dissolved mL/L 1.164 5.505 15 Flag:Oxygen:Dissolved n/a $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 3 I I 0 2 -99 ' ' 3 I I 0 3 -99 ' ' 7 F ' ' 1 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 6 F ' ' 1 6 -99 ' ' 8 F ' ' 3 7 -99 ' ' 9 F ' ' 4 8 -99 ' ' 7 F ' ' 2 9 -99 ' ' 6 F ' ' 1 10 ' ' ' ' 5 I I 0 11 -99 ' ' 5 I I ' ' 12 -99 ' ' 9 F R4 4 13 0 ' ' 3 NQ C ' ' 14 -99 ' ' 8 F R4 3 15 0 ' ' 3 NQ C ' ' $END $REMARKS Flag channels initialized with zeros. Non-zero values have the following significance: -------------------------------------------------------------------------------------- 1 = Sample for this measurement was drawn from water bottle but not analyzed (not normally used). 2 = Acceptable measurement (not normally used). 3 = Questionable measurement (no problem observed in sampling or analysis, but value is not trusted, nonetheless; includes outlyers). 4 = Bad measurement (known problem with sampling or analysis, but not serious enough to completely discard the value). 5 = Not reported (lost sample; unredeemably bad measurement). 6 = Mean of replicate measurements. 7 = Manual chromatographic peak measurement. 8 = Irregular digital chromatographic peak integration. 9 = Sample not drawn for this measurement from this bottle (not normally used). -------------------------------------------------------------------------------------- $END *ADMINISTRATION MISSION : 2010-69 AGENCY : IOS, Ocean Sciences Division, Sidney, B.C. COUNTRY : Canada PROJECT : La Perouse, Aquaculture, Effingham, Neptune SCIENTIST : Juhasz T. PLATFORM : John P. Tully *LOCATION GEOGRAPHIC AREA : Johnstone Strait / WCVI STATION : EF06 EVENT NUMBER : 26 LATITUDE : 49 1.77000 N ! (deg min) LONGITUDE : 125 9.18000 W ! (deg min) WATER DEPTH : 149 ALTIMETER (M) : 5.15 ! custom item $REMARKS Altimeter value is distance from bottom and is calculated as the median of the deepest 2 metres of data. $END *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0506 LOCATION : Mid-ship ! custom item $REMARKS SOFTWARE VERSION SEASAVE V 7.20G $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.1 2011/07/08 14:15:17 2169 2169 CLEAN 5.0.3 2011/07/08 14:15:44 ? ? ADDSAMP 3.5 2011/07/12 09:13:06 2169 2169 BINAVE 4.1.1 2011/07/12 09:13:19 2169 9 SORT 3.5 2011/07/12 09:13:36 9 9 MERGE 3.4 2011/07/14 10:24:38 9 9 CLEAN 5.0.3 2011/07/14 10:24:41 ? ? CALIB 11.7 2011/07/14 15:34:59 9 9 SORT 3.5 2011/07/14 16:00:16 9 9 REMOVECH 8.0 2011/07/14 16:02:44 9 9 CHGUNITS 3.0 2011/07/14 17:45:39 9 9 REORDER 1.3 2011/07/19 13:19:20 ? ? HDREDIT2 2.5.1 2011/07/19 14:00:05 ? ? CHANGE_FLAGS 1.0 2013/07/29 14:31:46 9 9 CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:35:12 9 9 CHANGE_FLAGS 2.0 2014/11/20 09:57:28 9 9 $END $REMARKS -CLEAN functions: 2011/07/08 14:15:32 20 Set event to last 4 characters of file name -The following ADDSAMP parameters were used: Sample Number Lookup File: Q:\Cruise_Data_Processing\2010-69\Processing\hydro\addsamp.csv Bottle Channel Name: Bottle_Number -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -SORT parameters: 2011/07/12 09:13:36 Sorted in ascending order of channel Sample_Number -The following MERGE parameters were used: 2011/07/14 10:24:37 2011/07/14 10:24:37 2011/07/14 10:24: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Salinity:Bottle, Flag:Salinity:Bottle, Chlorophyll:Extracted, Flag:Chlorophyll:Extracted, Phaeo-Pigment:Extracted, Oxygen:Dissolved, Flag:Oxygen:Dissolved, Nitrate_plus_Nitrite, Flag:Nitrate_plus_Nitrite, Silicate, Flag:Silicate, Phosphate, Flag:Phosphate Primary file : Q:\Cruise_Data_Processing\2010-69\Processing\hydro\2010-69-0026.samavgsort Secondary file: Q:\Cruise_Data_Processing\2010-69\Processing\hydro\2010-69-0026.mrgcln1 -CLEAN functions: 2011/07/14 10:24:40 20 Remove Sea-Bird comments from the header. -CALIB parameters: 2011/07/14 15:34:59 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = Q:\Cruise_Data_Processing\2010-69\Processing\doc\2010-69-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 14 Oxygen:Dissolved:SBE mL/L 10 -0.1150000E-01 0.1049700E+01 15 Salinity:T0:C0 PSS-78 10 0.3200000E-02 0.1000000E+01 16 Salinity:T1:C1 PSS-78 10 -0.5000000E-03 0.1000000E+01 -SORT parameters: 2011/07/14 16:00:16 Sorted in ascending order of channel Pressure -REMOVECH 2011/07/14 16:02:44 The following CHANNEL(S) were removed: Scan_Number Temperature:Primary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] Altimeter [metres] Descent_Rate [m/s] Status:Pump Salinity:T0:C0 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2011/07/19 14:00:05 Applied edit header: Q:\Cruise_Data_Processing\2010-69\Processing\doc\2010-69-bot-hdr-0506.txt Channel 2: Bottle:Firing_Sequence [n/a] Name: Bottle_Number ==> Bottle:Firing_Sequence Channel 3: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 6: Fluorescence:URU:Seapoint [mg/m^3] Name: Fluorescence:Seapoint ==> Fluorescence:URU:Seapoint Channel 1: Bottle_Number [n/a] Name: Bottle:Position ==> Bottle_Number Channel 8: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 14: Oxygen:Dissolved [mL/L] Units: ==> mL/L Channel 9: Oxygen:Dissolved:SBE [umol/kg] Format: F6.2 ==> F6.1 $END *COMMENTS Comments from secondary file: Q:\Cruise_Data_Processing\2010-69\Processing\hydro\2010-69-0026.mrgcln1 ----------------------------------------------------------------------- Comments from secondary file: Q:\Cruise_Data_Processing\2010-69\Processing\hydro\2010-69-0026.add ------------------------------------------------------------------- Sample_Number 163: DO: chunky ppt, sample not well shaken; outlier in COMPARE Analysis methods: - ----------------- Oxygen samples are analyzed on an automated Winkler titration system following the procedures of Carpenter (1965). Samples were analyzed using an automated titration system consisting of a Brinkman Dosimat (model 665) and a PC 950 Colorimeter. Samples from events #1-11 were analyzed at sea. Samples from events #22-30 were analyzed at the Institute of Ocean Sciences within a week of collection. File 2010-69oxy.xls includes the raw data and duplicate analysis. Salinity samples were collected in glass bottles and analyzed at IOS on a Guildline model 8400B Autosal standardized with IAPSO standard seawater. See file 2010-69-sal.xls for analysis output. There were no duplicates. References: 1. Carpenter, J.H. 1965. The Chesapeake Bay Institute Technique for the Winkler Dissolved Oxygen Method. Limmnol. & Oceanogr., 10: 141-143. 2. Culberson, C. H., and R. T. Williams. 1991. A comparison of methods for the determination of dissolved oxygen in seawater. Report No. WHPO 91-2. WOCE Hydrographic Programme Office. Woods Hole Oceanographic Institution, Woods Hole, Mass. ------------------------------------------------------------------------- Fluorescence, Transmissivity and PAR data are nominal and unedited except that some records were removed in editing temperature and salinity. There is insufficient information to make a precision estimate for the SBE dissolved oxygen channel for sensor #1176 (CTD #0506). Almost half the samples had been flagged by the analyst due to sampling problems, and many others were major outliers in the comparison with the CTD. All sampling was in Effingham Inlet where shallow casts, large gradients and other challenging conditions make comparisons unreliable. For details on the processing see processing report: 2010-69-proc.doc. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- -------- ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (-0.115E-01 1.0497) Salinity:T0:C0 PSS-78 10 -99 () (0.32E-02 1) Salinity:T1:C1 PSS-78 10 -99 () (-0.5E-03 1) $END !1- 2- --3--- ---4---- --5-- ---6--- ---7---- --8--- --9-- -10- -11- ---12--- 13 ---14-- 15 !Bo Bo Pressu Temperat Trans Fluores Salinity Oxygen Oxyge Numb Samp Salinity Fl Oxygen: Fl !tt tt re ure: missi cence: :T1:C1 : n: er_o le_ :Bottle ag Dissolv ag !~u ~u Secondar vity URU: Dissol Disso ~bin Numb ~o ed ~o !mb en y Seapoin ved: lved: _rec er tt lv !er ce t SBE SBE ords le ed !-- -- ------ -------- ----- ------- -------- ------ ----- ---- ---- -------- -- ------- -- *END OF HEADER 9 9 1.8 13.2896 24.4 1.528 29.9801 5.35 233.4 241 164 -99.0000 0 5.505 0 8 8 10.7 11.2938 57.5 0.182 31.6920 4.22 183.9 241 163 -99.0000 0 3.005 4 7 7 20.6 10.2721 58.0 0.131 31.9521 3.61 157.1 241 162 -99.0000 0 2.800 0 6 6 30.7 9.6100 57.6 0.060 32.1825 3.24 141.1 241 161 -99.0000 0 2.922 0 5 5 51.0 8.9620 54.7 0.040 32.4544 2.46 107.3 241 160 -99.0000 0 2.329 0 4 4 75.9 8.2085 49.7 0.038 32.8037 1.21 52.8 241 159 32.8120 0 1.178 0 3 3 101.2 8.1948 46.4 0.039 32.8387 1.47 63.8 241 158 -99.0000 0 1.416 0 2 2 125.9 8.1917 44.1 0.039 32.8487 1.53 66.6 241 157 -99.0000 0 1.484 0 1 1 145.7 8.1926 43.5 0.041 32.8518 1.56 68.0 241 156 -99.0000 0 1.164 0