*2014/11/20 09:57:28.18 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2010/09/18 05:07:09.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 19 DATA DESCRIPTION : Bottle:Rosette:Up:Stop + CTD:Up FILE TYPE : ASCII CRC : F472183E NUMBER OF CHANNELS : 15 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Bottle_Number n/a 1 19 2 Bottle:Firing_Sequence n/a 1 19 3 Pressure decibar 2.982 1283.249 4 Temperature:Secondary 'deg C (ITS90)' 2.9082 14.769 5 Transmissivity %/metre 42 60.5 6 Fluorescence:URU:Seapoint mg/m^3 0.91E-01 2.334 7 Salinity:T1:C1 PSS-78 31.7353 34.4562 8 Oxygen:Dissolved:SBE mL/L 0.273 6.053 9 Oxygen:Dissolved:SBE umol/kg 11.86489 263.9737 10 Number_of_bin_records n/a 241 241 11 Sample_Number n/a 85 103 12 Salinity:Bottle PSS-78 34.3717 34.3717 13 Flag:Salinity:Bottle n/a 14 Oxygen:Dissolved mL/L 0.273 6.052 15 Flag:Oxygen:Dissolved n/a $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 3 I I 0 2 -99 ' ' 3 I I 0 3 -99 ' ' 7 F ' ' 1 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 6 F ' ' 1 6 -99 ' ' 8 F ' ' 3 7 -99 ' ' 9 F ' ' 4 8 -99 ' ' 7 F ' ' 2 9 -99 ' ' 6 F ' ' 1 10 ' ' ' ' 5 I I 0 11 -99 ' ' 5 I I ' ' 12 -99 ' ' 9 F R4 4 13 0 ' ' 3 NQ C ' ' 14 -99 ' ' 8 F R4 3 15 0 ' ' 3 NQ C ' ' $END $REMARKS Flag channels initialized with zeros. Non-zero values have the following significance: -------------------------------------------------------------------------------------- 1 = Sample for this measurement was drawn from water bottle but not analyzed (not normally used). 2 = Acceptable measurement (not normally used). 3 = Questionable measurement (no problem observed in sampling or analysis, but value is not trusted, nonetheless; includes outlyers). 4 = Bad measurement (known problem with sampling or analysis, but not serious enough to completely discard the value). 5 = Not reported (lost sample; unredeemably bad measurement). 6 = Mean of replicate measurements. 7 = Manual chromatographic peak measurement. 8 = Irregular digital chromatographic peak integration. 9 = Sample not drawn for this measurement from this bottle (not normally used). -------------------------------------------------------------------------------------- $END *ADMINISTRATION MISSION : 2010-69 AGENCY : IOS, Ocean Sciences Division, Sidney, B.C. COUNTRY : Canada PROJECT : La Perouse, Aquaculture, Effingham, Neptune SCIENTIST : Juhasz T. PLATFORM : John P. Tully *LOCATION GEOGRAPHIC AREA : Johnstone Strait / WCVI STATION : LBP5 EVENT NUMBER : 9 LATITUDE : 50 0.01000 N ! (deg min) LONGITUDE : 128 0.04000 W ! (deg min) WATER DEPTH : 1000 ALTIMETER (M) : 10.6 ! custom item $REMARKS Altimeter value is distance from bottom and is calculated as the median of the deepest 2 metres of data. $END *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0443 LOCATION : Mid-ship ! custom item $REMARKS SOFTWARE VERSION SEASAVE V 7.20G $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.1 2011/07/08 13:52:47 4579 4579 CLEAN 5.0.3 2011/07/08 14:15:38 ? ? ADDSAMP 3.5 2011/07/12 09:13:00 4579 4579 BINAVE 4.1.1 2011/07/12 09:13:16 4579 19 SORT 3.5 2011/07/12 09:13:36 19 19 MERGE 3.4 2011/07/14 10:24:37 19 19 CLEAN 5.0.3 2011/07/14 10:24:41 ? ? CALIB 11.7 2011/07/14 15:34:59 19 19 SORT 3.5 2011/07/14 16:00:16 19 19 REMOVECH 8.0 2011/07/14 16:02:44 19 19 CHGUNITS 3.0 2011/07/14 17:45:39 19 19 REORDER 1.3 2011/07/19 13:19:19 ? ? HDREDIT2 2.5.1 2011/07/19 13:54:26 ? ? CHANGE_FLAGS 1.0 2013/07/29 14:31:46 19 19 CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:35:12 19 19 CHANGE_FLAGS 2.0 2014/11/20 09:57:28 19 19 $END $REMARKS -CLEAN functions: 2011/07/08 14:15:32 20 Set event to last 4 characters of file name -The following ADDSAMP parameters were used: Sample Number Lookup File: Q:\Cruise_Data_Processing\2010-69\Processing\hydro\addsamp.csv Bottle Channel Name: Bottle_Number -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -SORT parameters: 2011/07/12 09:13:36 Sorted in ascending order of channel Sample_Number -The following MERGE parameters were used: 2011/07/14 10:24:37 2011/07/14 10:24:37 2011/07/14 10:24: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Salinity:Bottle, Flag:Salinity:Bottle, Chlorophyll:Extracted, Flag:Chlorophyll:Extracted, Phaeo-Pigment:Extracted, Oxygen:Dissolved, Flag:Oxygen:Dissolved, Nitrate_plus_Nitrite, Flag:Nitrate_plus_Nitrite, Silicate, Flag:Silicate, Phosphate, Flag:Phosphate Primary file : Q:\Cruise_Data_Processing\2010-69\Processing\hydro\2010-69-0009.samavgsort Secondary file: Q:\Cruise_Data_Processing\2010-69\Processing\hydro\2010-69-0009.mrgcln1 -CLEAN functions: 2011/07/14 10:24:40 20 Remove Sea-Bird comments from the header. -CALIB parameters: 2011/07/14 15:34:59 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = Q:\Cruise_Data_Processing\2010-69\Processing\doc\2010-69-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 15 Oxygen:Dissolved:SBE mL/L 10 0.9000000E-03 0.1088200E+01 16 Salinity:T0:C0 PSS-78 10 0.5000000E-02 0.1000000E+01 17 Salinity:T1:C1 PSS-78 10 0.2500000E-02 0.1000000E+01 -SORT parameters: 2011/07/14 16:00:16 Sorted in ascending order of channel Pressure -REMOVECH 2011/07/14 16:02:44 The following CHANNEL(S) were removed: Scan_Number Temperature:Primary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] PAR [uE/m^2/sec] Altimeter [metres] Descent_Rate [m/s] Status:Pump Salinity:T0:C0 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2011/07/19 13:54:26 Applied edit header: Q:\Cruise_Data_Processing\2010-69\Processing\doc\2010-69-bot-hdr-0443.txt Channel 2: Bottle:Firing_Sequence [n/a] Name: Bottle_Number ==> Bottle:Firing_Sequence Channel 3: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 6: Fluorescence:URU:Seapoint [mg/m^3] Name: Fluorescence:Seapoint ==> Fluorescence:URU:Seapoint Channel 1: Bottle_Number [n/a] Name: Bottle:Position ==> Bottle_Number Channel 8: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 14: Oxygen:Dissolved [mL/L] Units: ==> mL/L Channel 9: Oxygen:Dissolved:SBE [umol/kg] Format: F6.2 ==> F6.1 $END *COMMENTS Comments from secondary file: Q:\Cruise_Data_Processing\2010-69\Processing\hydro\2010-69-0009.mrgcln1 ----------------------------------------------------------------------- Comments from secondary file: Q:\Cruise_Data_Processing\2010-69\Processing\hydro\2010-69-0009.sal ------------------------------------------------------------------- Sample #86: Salinity: Outlier in comparison of bottles with CTD salinity. Analysis methods: - ----------------- Oxygen samples are analyzed on an automated Winkler titration system following the procedures of Carpenter (1965). Samples were analyzed using an automated titration system consisting of a Brinkman Dosimat (model 665) and a PC 950 Colorimeter. Samples from events #1-11 were analyzed at sea. Samples from events #22-30 were analyzed at the Institute of Ocean Sciences within a week of collection. File 2010-69oxy.xls includes the raw data and duplicate analysis. Salinity samples were collected in glass bottles and analyzed at IOS on a Guildline model 8400B Autosal standardized with IAPSO standard seawater. See file 2010-69-sal.xls for analysis output. There were no duplicates. References: 1. Carpenter, J.H. 1965. The Chesapeake Bay Institute Technique for the Winkler Dissolved Oxygen Method. Limmnol. & Oceanogr., 10: 141-143. 2. Culberson, C. H., and R. T. Williams. 1991. A comparison of methods for the determination of dissolved oxygen in seawater. Report No. WHPO 91-2. WOCE Hydrographic Programme Office. Woods Hole Oceanographic Institution, Woods Hole, Mass. ------------------------------------------------------------------------- Fluorescence, Transmissivity and PAR data are nominal and unedited except that some records were removed in editing temperature and salinity. The precision of the SBE dissolved oxygen channel is difficult to estimate because the comparison with bottles was complex and noisy, and the history of the sensor confusing, but roughly, DO from sensor #1483 (CTD #0443) is considered: • ±0.4ml/l from 0-100 db • ±0.2ml/l from 100-300 db • ±0.05ml/l below 300db For details on the processing see processing report: 2010-69-proc.doc. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- -------- ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (0.9E-03 1.0882) Salinity:T0:C0 PSS-78 10 -99 () (0.5E-02 1) Salinity:T1:C1 PSS-78 10 -99 () (0.25E-02 1) $END !1- 2- --3--- ---4---- --5-- ---6--- ---7---- --8--- --9-- -10- -11- ---12--- 13 ---14-- 15 !Bo Bo Pressu Temperat Trans Fluores Salinity Oxygen Oxyge Numb Samp Salinity Fl Oxygen: Fl !tt tt re ure: missi cence: :T1:C1 : n: er_o le_ :Bottle ag Dissolv ag !~u ~u Secondar vity URU: Dissol Disso ~bin Numb ~o ed ~o !mb en y Seapoin ved: lved: _rec er tt lv !er ce t SBE SBE ords le ed !-- -- ------ -------- ----- ------- -------- ------ ----- ---- ---- -------- -- ------- -- *END OF HEADER 19 19 3.0 14.7690 46.4 1.509 31.7353 6.00 261.8 241 103 -99.0000 0 6.052 0 18 18 10.8 14.1075 42.0 2.334 31.7751 6.05 264.0 241 102 -99.0000 0 6.012 0 17 17 21.1 10.8831 49.3 0.775 32.3336 5.20 226.4 241 101 -99.0000 0 5.261 0 16 16 31.4 8.8296 57.6 0.241 32.5234 4.91 213.7 241 100 -99.0000 0 4.868 0 15 15 51.4 7.6498 58.9 0.153 33.0794 3.92 170.6 241 99 -99.0000 0 3.969 0 14 14 76.5 7.0310 59.7 0.105 33.3799 3.80 165.5 241 98 -99.0000 0 3.800 0 13 13 100.5 6.8284 59.9 0.098 33.6927 3.34 145.3 241 97 -99.0000 0 3.359 0 12 12 125.8 6.7637 60.3 0.098 33.8465 2.98 129.4 241 96 -99.0000 0 2.990 0 11 11 151.2 6.6575 60.5 0.097 33.8727 2.91 126.6 241 95 -99.0000 0 2.923 0 10 10 176.2 6.5205 59.3 0.097 33.8906 2.35 102.2 241 94 -99.0000 0 2.388 0 9 9 201.2 6.3157 60.0 0.096 33.9229 2.15 93.4 241 93 -99.0000 0 2.161 0 8 8 251.4 5.9864 60.3 0.094 33.9537 1.76 76.4 241 92 -99.0000 0 1.793 0 7 7 301.0 5.8148 59.4 0.093 33.9918 1.38 60.2 241 91 -99.0000 0 1.394 0 6 6 400.7 5.5111 59.6 0.092 34.0383 0.99 43.2 241 90 -99.0000 0 1.013 0 5 5 500.6 5.2384 59.1 0.092 34.0783 0.79 34.4 241 89 -99.0000 0 0.790 6 4 4 600.6 4.9625 59.8 0.092 34.1203 0.57 24.8 241 88 -99.0000 0 0.577 0 3 3 801.1 4.1256 60.2 0.091 34.2677 0.27 11.9 241 87 -99.0000 0 0.273 0 2 2 1000.6 3.5650 58.7 0.092 34.3573 0.31 13.3 241 86 34.3717 3 0.307 0 1 1 1283.2 2.9082 56.6 0.092 34.4562 0.49 21.3 241 85 -99.0000 0 0.484 0