*2011/08/18 17:03:47.14 *IOS HEADER VERSION 1.8 2007/05/25 2007/05/25 *FILE START TIME : UTC 2010/10/13 22:04:46.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 98 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 3A6C28A4 NUMBER OF CHANNELS : 8 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Pressure decibar 5.443 102.031 2 Temperature:Primary 'deg C (ITS90)' 8.7548 11.5585 3 Transmissivity %/metre 33 54.7 4 Fluorescence:URU:Seapoint mg/m^3 0.244 0.653 5 Salinity:T0:C0 PSS-78 31.3204 32.3437 6 Oxygen:Dissolved:SBE mL/L 3.013 5.471 7 Oxygen:Dissolved:SBE umol/kg 131.2184 238.5601 8 Number_of_bin_records n/a 8 68 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 6 F ' ' 1 4 -99 ' ' 8 F ' ' 3 5 -99 ' ' 9 F ' ' 4 6 -99 ' ' 7 F ' ' 2 7 -99 ' ' 6 F ' ' 1 8 ' ' ' ' 5 I I 0 $END $REMARKS This file converted from Sea-Bird file: Q:\Cruise_Data_Processing\2010-18\Pro $END *ADMINISTRATION MISSION : 2010-18 AGENCY : PBS, Salmon And Freshwater Ecosystems, Nanaimo, B.C. COUNTRY : Canada PROJECT : High Seas Salmon SCIENTIST : Trudel M. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : Strait of Georgia/Juan de Fuca Strait/WCVI/BC Inlets STATION : JF 05 EVENT NUMBER : 125 LATITUDE : 48 30.31000 N ! (deg min) LONGITUDE : 124 27.76000 W ! (deg min) WATER DEPTH : 113 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0585 $REMARKS SOFTWARE VERSION SEASAVE V 7.19 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.1 2011/08/11 16:11:12 7314 7314 CLEAN 5.0.3 2011/08/11 16:27:02 7287 7287 SHIFTDAT 3.4 2011/08/12 10:50:53 7287 7287 SHIFTDAT 3.4 2011/08/12 13:20:39 7287 7287 SHIFTDAT 3.4 2011/08/12 13:30:54 7287 7287 DELETE 6.3 2011/08/12 13:40:29 7287 2745 CTDEDIT 4.61 2011/08/15 10:16:33 2745 2584 FILTERS 4.3 2011/08/18 14:31:33 2584 2584 BINAVE 4.1.1 2011/08/18 14:33:12 2584 98 REMOVECH 8.0 2011/08/18 14:59:13 98 98 CHGUNITS 3.0 2011/08/18 14:59:29 98 98 REORDER 1.3 2011/08/18 14:59:44 ? ? HDREDIT2 2.5.1 2011/08/18 17:03:47 ? ? $END $REMARKS -CLEAN functions: 2011/08/11 16:24:49 20 Interpolation by Record Number, in Pressure Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:Seapoint # of Records to Advance (-ve for Delay): At REC# 0 Shift= 24.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= 0.40 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Conductivity:Secondary # of Records to Advance (-ve for Delay): At REC# 0 Shift= 1.50 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 92.68 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT 2011/08/15 10:16:33 161 records were deleted in this editing session. 42 changes in channel Salinity:T0:C0 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2011/08/18 14:59:13 The following CHANNEL(S) were removed: Scan_Number Temperature:Secondary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] pH:SBE [pH Units] Status:Pump Descent_Rate [m/s] Salinity:T1:C1 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2011/08/18 17:03:47 Applied edit header: Q:\Cruise_Data_Processing\2010-18\Processing\doc\2010-18-HDR.TXT Channel 1: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 4: Fluorescence:URU:Seapoint [mg/m^3] Name: Fluorescence:Seapoint ==> Fluorescence:URU:Seapoint Channel 6: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 7: Oxygen:Dissolved:SBE [umol/kg] Format: F7.2 ==> F6.1 $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\DATA\2010\2010-18\2010-18-0125.hex Software Version Seasave V 7.19 Temperature SN = 4054 Conductivity SN = 3321 Number of Bytes Per Scan = 37 Number of Voltage Words = 4 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Oct 13 2010 22:04:39 NMEA Latitude = 48 30.31 N NMEA Longitude = 124 27.76 W NMEA UTC (Time) = Oct 13 2010 22:04:46 Store Lat/Lon Data = Append to Every Scan W.E.Ricker 2010-18 Station: JF 05 Depth(m): 113 # nquan = 16 # nvalues = 7314 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = sbeox0V: Oxygen raw, SBE 43 [V] # name 7 = xmiss: Beam Transmission, Chelsea/Seatech [%] # name 8 = flSP: Fluorescence, Seapoint # name 9 = ph: pH # name 10 = pumps: Pump Status # name 11 = dz/dtM: Descent Rate [m/s] # name 12 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 13 = sal00: Salinity, Practical [PSU] # name 14 = sal11: Salinity, Practical, 2 [PSU] # name 15 = flag: flag # span 0 = 1, 7314 # span 1 = 0.621, 102.681 # span 2 = 8.7496, 11.6503 # span 3 = 8.7508, 11.6507 # span 4 = 3.442293, 3.600172 # span 5 = 3.442175, 3.599277 # span 6 = 1.5165, 2.5031 # span 7 = 0.3424, 86.1415 # span 8 = 0.0000e+00, 8.0220e-01 # span 9 = 7.555, 7.885 # span 10 = 0, 1 # span 11 = -1.555, 1.503 # span 12 = 3.00587, 5.53212 # span 13 = 31.2057, 32.3484 # span 14 = 31.2057, 32.3497 # span 15 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Oct 13 2010 22:04:46 [NMEA time, header] # bad_flag = -9.990e-29 # # # # # 4054 # 29-Dec-10 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.38606214e-003 # 6.43815959e-004 # 2.28358480e-005 # 2.05028550e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 3321 # 29-dec-2010 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -9.95131588e+000 # 1.44518593e+000 # 7.46215400e-004 # 2.39047302e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0585 # 10-feb-11 # -3.951550e+004 # -4.415130e-001 # 1.282560e-002 # 3.560600e-002 # 0.000000e+000 # 3.030045e+001 # -4.415690e-004 # 4.342710e-006 # 1.736800e-009 # 0.99992000 # -1.74950 # 0.000000e+000 # 1.288270e-002 # -8.164490e+000 # # # # # # 4700 # 29-Dec-10 # 1 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.000 # 4.34734844e-003 # 6.38032358e-004 # 2.09765828e-005 # 1.76787001e-006 # 1000.000 # 1.00000000 # 0.0000 # # # # # # 1766 # 28-Dec-10 # 1 # # 0.0000 # 2000.0000 # 0 # # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.00000000e+000 # 0.0 # -9.57000000e-008 # # # -4.13546819e+000 # 4.88372744e-001 # -5.99437046e-004 # 5.18753457e-005 # -9.57000000e-008 # 3.2500e-006 # # 0.00000000e+000 # # 1.00000000 # 0.00000 # # # # # # 0997 # 24-Dec-10p # 1 # # # 0.0000 # 0.0000e+000 # 0.0000 # 0.00e+000 # 0.0000 # 0.0 # # # # 4.3190e-001 # -0.4877 # 5.8449e-004 # 1.0171e-004 # -2.3810e-006 # 2.5826e+000 # 1.92630e-004 # -4.64800e-002 # 3.6000e-002 # 1.5400 #

-3.3000e-002

#

5.0000e+003

#

1.4500e+003

#
#
#
# # # # # # # 2648 # # # 1 # 0.000 # # # # # # # # # # # # 0692 # 23-dec-10 # 4.6547 # 2.7833 # # # # # # 1005dr # 20-Jul-10 # 26.7184 # -1.5497 # 0.250 # # # # # #
# datcnv_date = Aug 11 2011 13:31:24, 7.21d [datcnv_vars = 12] # datcnv_in = Q:\Cruise_Data_Processing\2010-18\RAW\CTD\2010-18-0125.hex Q:\Crui se_Data_Processing\2010-18\Processing\doc\2010-18-ctd2-postcal.con # datcnv_skipover = 0 # datcnv_ox_hysteresis_correction = no # wildedit_date = Aug 11 2011 13:40:37, 7.21d # wildedit_in = Q:\Cruise_Data_Processing\2010-18\Processing\convert\2010-18-012 5.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # alignctd_date = Aug 11 2011 15:15:30, 7.21d # alignctd_in = Q:\Cruise_Data_Processing\2010-18\Processing\wildedit\2010-18-01 25.cnv # alignctd_adv = sbeox0V 4.000 # celltm_date = Aug 11 2011 15:46:00, 7.21d # celltm_in = Q:\Cruise_Data_Processing\2010-18\Processing\Align\2010-18-0125.cn v # celltm_alpha = 0.0300, 0.0300 # celltm_tau = 9.0000, 9.0000 # celltm_temp_sensor_use_for_cond = primary, secondary # Derive_date = Aug 11 2011 15:55:27, 7.21d [derive_vars = 3] # Derive_in = Q:\Cruise_Data_Processing\2010-18\Processing\celltm\2010-18-0125.c nv Q:\Cruise_Data_Processing\2010-18\Processing\doc\2010-18-ctd2-postcal.con # derive_time_window_docdt = seconds: 2 # derive_ox_tau_correction = no # file_type = ascii END* CTDEDIT was used to remove records near the top and some other records corrupted by shed wakes; salinity was cleaned. ***************************************************************************************** The transmissivity, SBE fluorescence and SBE Dissolved Oxygen data are nominal and unedited except that some records were removed in editing temperature and salinity. SBE Fluorescence values are almost constant with some spikes for Events #372 to #567. The odd fluorescence signals may be related to the extremely low extracted chlorophyll values in the northern part of the cruise. (See file 2010-18_Bottles_plus_CTD_Data.xls) Post-cruise calibrations were used for all sensors on the CTD except the transmissometer. No estimate can be made of the precision of the SBE Dissolved Oxygen channel since there was no DO sampling. The availability of a post-cruise calibration in late December 2010 should minimize errors due to calibration drift, but not those due to slow response time. SBE:pH data have been removed from the file because of quality concerns. ***************************************************************************************** !--1--- ---2---- --3-- ---4--- ---5---- --6--- --7-- -8-- !Pressu Temperat Trans Fluores Salinity Oxygen Oxyge Numb !re ure: missi cence: :T0:C0 : n: er_o ! Primary vity URU: Dissol Disso ~bin ! Seapoin ved: lved: _rec ! t SBE SBE ords !------ -------- ----- ------- -------- ------ ----- ---- *END OF HEADER 5.4 11.5585 49.2 0.440 31.3204 5.47 238.6 8 6.0 11.5309 49.3 0.475 31.4407 5.45 237.4 41 7.0 11.5144 50.3 0.499 31.4998 5.39 235.2 37 8.0 11.5014 50.6 0.521 31.5226 5.33 232.4 26 9.0 11.3980 51.0 0.557 31.5860 5.28 230.1 28 10.0 11.3616 51.1 0.542 31.5860 5.22 227.6 25 11.0 11.2570 51.0 0.559 31.5798 5.17 225.6 24 12.0 11.1824 50.4 0.553 31.5983 5.14 224.1 21 13.0 11.1054 48.9 0.536 31.5873 5.11 222.9 24 14.0 11.0665 49.5 0.574 31.5751 5.08 221.6 27 15.0 10.9934 48.8 0.549 31.5595 5.06 220.6 29 16.0 10.9570 48.4 0.524 31.5509 5.04 219.8 29 17.0 10.9377 48.1 0.555 31.5479 5.02 219.0 26 18.0 10.9094 48.2 0.582 31.5457 5.01 218.6 26 19.0 10.9054 48.0 0.566 31.5465 5.00 217.8 30 20.0 10.8882 48.0 0.577 31.5486 4.97 216.6 28 21.0 10.8752 47.9 0.579 31.5428 4.93 215.1 24 22.0 10.6973 47.1 0.614 31.5375 4.91 214.2 24 23.0 10.6954 46.4 0.595 31.5339 4.88 212.6 24 24.0 10.5862 46.1 0.621 31.5265 4.86 211.8 24 25.0 10.5661 45.7 0.637 31.5238 4.84 211.0 27 26.0 10.5595 45.6 0.624 31.5253 4.82 210.2 31 27.0 10.5558 45.4 0.649 31.5329 4.80 209.4 29 28.0 10.5454 46.1 0.653 31.5608 4.78 208.2 24 29.0 10.5584 46.6 0.618 31.6126 4.72 205.7 25 30.0 10.5482 48.0 0.631 31.6812 4.63 201.9 27 31.0 10.3612 47.6 0.631 31.6631 4.57 199.0 23 32.0 10.0061 45.0 0.614 31.6395 4.55 198.3 24 33.0 10.1455 44.1 0.589 31.7220 4.52 196.9 23 34.0 10.1973 47.0 0.575 31.7378 4.50 196.2 28 35.0 10.4003 48.3 0.552 31.8354 4.47 194.7 27 36.0 10.4088 51.0 0.514 31.8788 4.43 193.2 33 37.0 10.4219 51.0 0.487 31.9000 4.38 190.7 28 38.0 10.3603 52.8 0.443 31.9430 4.34 189.1 22 39.0 10.3196 53.2 0.419 31.9476 4.31 187.7 21 40.0 10.3173 53.5 0.408 31.9544 4.27 186.2 22 41.0 10.3122 54.0 0.393 31.9698 4.24 184.7 24 42.0 10.2379 54.4 0.366 31.9752 4.21 183.4 29 43.0 10.2241 54.7 0.351 31.9751 4.17 181.7 33 44.0 10.1800 54.7 0.338 31.9764 4.12 179.4 37 45.0 10.1141 54.6 0.329 31.9793 4.07 177.2 29 46.0 10.0335 54.5 0.318 32.0028 4.04 175.9 25 47.0 10.0194 54.6 0.310 32.0083 4.01 174.6 23 48.0 10.0150 54.6 0.305 32.0096 3.96 172.8 21 49.0 9.9788 54.6 0.311 32.0103 3.92 170.8 21 50.0 9.8271 53.8 0.306 32.0083 3.88 169.0 24 51.0 9.6215 52.0 0.310 31.9940 3.84 167.2 30 52.0 9.5615 50.7 0.318 31.9844 3.78 164.7 37 53.0 9.4763 49.6 0.324 31.9824 3.72 162.2 35 54.0 9.4025 47.7 0.332 31.9900 3.67 159.8 27 55.0 9.3886 48.0 0.326 32.0285 3.61 157.4 23 56.0 9.2907 48.9 0.321 32.0466 3.58 155.9 23 57.0 9.2177 46.7 0.310 32.0566 3.55 154.6 21 58.0 9.1978 45.2 0.313 32.0597 3.53 153.6 22 59.0 9.1796 44.8 0.310 32.0698 3.50 152.5 27 60.0 9.1596 44.4 0.303 32.0816 3.47 151.0 41 61.0 9.1301 45.5 0.307 32.1011 3.43 149.6 42 62.0 9.1184 45.5 0.293 32.1062 3.42 148.8 26 63.0 9.1161 45.3 0.309 32.1074 3.40 148.3 21 64.0 9.1152 44.8 0.308 32.1075 3.39 147.9 18 65.0 9.1021 44.7 0.296 32.1124 3.38 147.4 18 66.0 9.0891 44.0 0.288 32.1195 3.37 146.8 19 67.0 9.0636 44.2 0.294 32.1355 3.36 146.2 25 67.9 9.0481 44.2 0.293 32.1454 3.34 145.5 34 68.9 9.0306 43.8 0.287 32.1564 3.30 143.8 39 70.0 8.9912 42.9 0.282 32.1806 3.27 142.6 22 71.0 8.9586 43.0 0.280 32.1995 3.26 141.9 18 72.0 8.9551 43.0 0.289 32.2013 3.25 141.6 17 73.0 8.9496 43.1 0.293 32.2042 3.24 141.1 17 74.0 8.9470 43.3 0.278 32.2057 3.23 140.7 19 75.0 8.9426 43.5 0.284 32.2085 3.22 140.3 22 76.1 8.9371 43.9 0.274 32.2117 3.21 139.9 36 76.9 8.9325 44.3 0.276 32.2146 3.20 139.3 37 77.9 8.9204 44.6 0.272 32.2217 3.18 138.6 29 79.0 8.9168 44.2 0.274 32.2237 3.18 138.3 20 80.0 8.9153 44.0 0.280 32.2246 3.17 137.9 18 81.0 8.9112 43.5 0.301 32.2274 3.16 137.5 17 82.0 8.8999 43.6 0.274 32.2351 3.14 136.9 17 83.0 8.8638 43.1 0.257 32.2577 3.13 136.4 19 84.0 8.8478 43.3 0.255 32.2674 3.12 136.0 21 85.1 8.8440 44.2 0.255 32.2697 3.11 135.5 30 86.0 8.8430 44.5 0.253 32.2705 3.10 135.0 50 86.9 8.8307 44.7 0.251 32.2792 3.08 134.3 33 88.0 8.8070 44.1 0.253 32.2977 3.07 133.6 29 89.0 8.7888 42.0 0.251 32.3117 3.06 133.2 21 90.0 8.7845 41.0 0.260 32.3145 3.05 132.8 20 91.0 8.7820 40.4 0.285 32.3172 3.04 132.6 17 92.0 8.7801 39.9 0.265 32.3190 3.04 132.4 18 93.0 8.7747 39.2 0.252 32.3241 3.04 132.3 20 94.0 8.7706 38.6 0.255 32.3283 3.03 132.1 23 95.0 8.7702 38.5 0.283 32.3291 3.03 132.0 28 96.0 8.7668 38.1 0.250 32.3325 3.03 131.9 38 96.9 8.7693 37.9 0.263 32.3300 3.02 131.7 68 98.0 8.7696 38.4 0.249 32.3298 3.02 131.6 28 99.0 8.7569 36.0 0.255 32.3417 3.02 131.6 22 100.0 8.7601 33.2 0.244 32.3386 3.02 131.4 20 101.0 8.7566 33.6 0.249 32.3419 3.02 131.3 19 102.0 8.7548 33.0 0.258 32.3437 3.01 131.2 21