*2014/11/20 09:57:01.38 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2010/05/31 15:58:12.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 20 DATA DESCRIPTION : Bottle:Rosette:Up:Stop + CTD:Up FILE TYPE : ASCII CRC : C9AC3722 NUMBER OF CHANNELS : 26 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- ------------------------------ --------------- -------------- -------------- 1 Sample_Number n/a 398 417 2 Pressure decibar 5.9 2000.6 3 Temperature:Secondary 'deg C (ITS90)' 1.9285 10.2993 4 Transmissivity %/metre 51 62.2 5 Fluorescence:URU:Seapoint mg/m^3 0.42E-01 1.051 6 Oxygen:Dissolved:SBE mL/L 0.26 6.7 7 Oxygen:Dissolved:SBE umol/kg 11.3 291.9 8 Salinity:T1:C1 PSS-78 31.76 34.5898 9 Number_of_bin_records n/a 121 121 10 Bottle_Number n/a 1 20 11 Salinity:Bottle PSS-78 31.761 34.5029 12 Flag:Salinity:Bottle n/a 13 Chlorophyll:Extracted mg/m^3 1.04 1.37 14 Flag:Chlorophyll:Extracted n/a 15 Phaeo-Pigment:Extracted mg/m^3 0.51 0.73 16 Flag:Phaeo-Pigment:Extracted n/a 17 Oxygen:Dissolved mL/L 0.242 6.755 18 Flag:Oxygen:Dissolved n/a 19 Nitrate_plus_Nitrite umol/L 3.70322 45.50234 20 Flag:Nitrate_plus_Nitrite n/a 21 Silicate umol/L 8.2 174 22 Flag:Silicate n/a 23 Phosphate umol/L 0.67243 3.312445 24 Flag:Phosphate n/a 25 Ammonium umol/L 0.28 0.37 26 Flag:Ammonium n/a $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 5 I I 0 2 -99 ' ' 7 F ' ' 1 3 -99 ' ' 9 F ' ' 4 4 -99 ' ' 6 F ' ' 1 5 -99 ' ' 8 F ' ' 3 6 -99 ' ' 7 F ' ' 2 7 -99 ' ' 6 F ' ' 1 8 -99 ' ' 9 F ' ' 4 9 ' ' ' ' 5 I I 0 10 -99 ' ' 3 I I 0 11 -99 ' ' 9 F R4 4 12 0 ' ' 3 NQ C ' ' 13 -99 ' ' 7 F R4 2 14 0 ' ' 3 NQ C ' ' 15 -99 ' ' 7 F R4 2 16 0 ' ' 3 NQ C ' ' 17 -99 ' ' 8 F R4 3 18 0 ' ' 3 NQ C ' ' 19 -99 ' ' 6 F R4 1 20 0 ' ' 3 NQ C ' ' 21 -99 ' ' 6 F R4 1 22 0 ' ' 3 NQ C ' ' 23 -99 ' ' 7 F R4 2 24 0 ' ' 3 NQ C ' ' 25 -99 ' ' 7 F R4 2 26 0 ' ' 3 NQ C ' ' $END $REMARKS Flag channels initialized with zeros. Non-zero values have the following significance: -------------------------------------------------------------------------------------- 1 = Sample for this measurement was drawn from water bottle but not analyzed (not normally used). 2 = Acceptable measurement (not normally used). 3 = Questionable measurement (no problem observed in sampling or analysis, but value is not trusted, nonetheless; includes outlyers). 4 = Bad measurement (known problem with sampling or analysis, but not serious enough to completely discard the value). 5 = Not reported (lost sample; unredeemably bad measurement). 6 = Mean of replicate measurements. 7 = Manual chromatographic peak measurement. 8 = Irregular digital chromatographic peak integration. 9 = Sample not drawn for this measurement from this bottle (not normally used). -------------------------------------------------------------------------------------- $END *ADMINISTRATION MISSION : 2010-12 AGENCY : IOS, Ocean Sciences Division, Sidney, B.C. COUNTRY : Canada PROJECT : La Perouse SCIENTIST : Yelland D. PLATFORM : John P. Tully *LOCATION GEOGRAPHIC AREA : North-East Pacific STATION : CS00 EVENT NUMBER : 99 LATITUDE : 50 27.64000 N ! (deg min) LONGITUDE : 129 55.07000 W ! (deg min) WATER DEPTH : 2175 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0506 LOCATION : Mid-ship ! custom item $REMARKS SOFTWARE VERSION SEASAVE V 7.18C $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.1 2010/08/30 15:02:08 2420 2420 CLEAN 5.0.2 2010/08/30 15:44:50 ? ? ADDSAMP 3.4 2010/08/31 08:42:26 2420 2420 BINAVE 4.1.1 2010/08/31 08:42:59 2420 20 MERGE 3.4 2010/11/04 15:35:39 20 20 CLEAN 5.0.2 2010/11/04 15:35:46 ? ? CALIB 11.7 2010/11/04 15:36:01 20 20 SORT 3.5 2010/11/04 15:36:17 20 20 REMOVECH 8.0 2010/11/04 15:37:54 20 20 CHGUNITS 3.0 2010/11/04 15:38:11 20 20 REORDER 1.2.1 2010/11/04 15:38:51 ? ? HDREDIT2 2.5.1 2010/11/04 15:39:55 ? ? CALIB 11.7 2013/06/04 13:14:34 20 20 HDREDIT2 2.6 2013/07/08 08:50:14 ? ? CHANGE_FLAGS 1.0 2013/07/29 14:31:28 20 20 CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:34:46 20 20 CHANGE_FLAGS 2.0 2014/11/20 09:57:01 20 20 $END $REMARKS -CLEAN functions: 2010/08/30 15:44:32 20 Set event to last 4 characters of file name -The following ADDSAMP parameters were used: Sample Number Lookup File: Q:\Cruise_Data_Processing\2010-12\Processing\hydro\addsamp.csv Bottle Channel Name: Bottle_Number -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -The following MERGE parameters were used: 2010/11/04 15:35:36 2010/11/04 15:35:36 2010/11/04 15:35: Merge Channel: Bottle_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Salinity:Bottle, Flag:Salinity:Bottle, Chlorophyll:Extracted, Flag:Chlorophyll:Extracted, Phaeo-Pigment:Extracted, Flag:Phaeo-Pigment:Extracted, Oxygen:Dissolved, Flag:Oxygen:Dissolved, Nitrate_plus_Nitrite, Flag:Nitrate_plus_Nitrite, Silicate, Flag:Silicate, Phosphate, Flag:Phosphate, Ammonium, Flag:Ammonium, Dimethyl_Sulphide, Flag:Dimethyl_Sulphide Primary file : Q:\Cruise_Data_Processing\2010-12\Processing\hydro\2010-12-0099.samavg Secondary file: Q:\Cruise_Data_Processing\2010-12\Processing\hydro\2010-12-0099.mrgcln1 Comments from secondary file: Q:\Cruise_Data_Processing\2010-12\Processing\hydro\2010-12-0099.mrgcln1 ----------------------------------------------------------------------- -CLEAN functions: 2010/11/04 15:35:08 20 Reduce header to sections: FIL ADM LOC DEP REC INS HIS RAW CAL COM Remarks removed from kept sections. -CLEAN functions: 2010/11/04 15:35:44 20 Remove Sea-Bird comments from the header. -CALIB parameters: 2010/11/04 15:36:01 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = Q:\Cruise_Data_Processing\2010-12\Processing\doc\2010-12-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 3 Pressure dbars 10 0.8000000E+00 0.9998800E+00 8 Transmissivity %/metre 10 0.0000000E+00 0.2440000E+01 16 Oxygen:Dissolved:SBE mL/L 10 -0.4300000E-02 0.1033900E+01 18 Salinity:T1:C1 PSS-78 10 -0.2500000E-02 0.1000000E+01 -SORT parameters: 2010/11/04 15:36:17 Sorted in ascending order of channel Pressure [dbars] -REMOVECH 2010/11/04 15:37:54 The following CHANNEL(S) were removed: Scan_Number Temperature:Primary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] PAR [uE/m^2/sec] Altimeter [metres] Descent_Rate [m/s] Status:Pump Salinity:T0:C0 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2010/11/04 15:39:55 Applied edit header: Q:\Cruise_Data_Processing\2010-12\Processing\doc\2010-12-bot-hdr.txt Channel 2: Pressure [decibar] Units: dbars ==> decibar Channel 5: Fluorescence:URU:Seapoint [mg/m^3] Name: Fluorescence:Seapoint ==> Fluorescence:URU:Seapoint Channel 6: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 12: Flag:Salinity:Bottle [n/a] Units: ==> n/a Channel 13: Chlorophyll:Extracted [mg/m^3] Units: ==> mg/m^3 Format: F8.3 ==> F7.2 Channel 14: Flag:Chlorophyll:Extracted [n/a] Units: ==> n/a Channel 17: Oxygen:Dissolved [mL/L] Units: ==> mL/L Channel 18: Flag:Oxygen:Dissolved [n/a] Units: ==> n/a Channel 15: Phaeo-Pigment:Extracted [mg/m^3] Units: ==> mg/m^3 Channel 25: Ammonium [umol/L] Units: ==> umol/L Format: F8.4 ==> F7.2 -CALIB parameters: 2013/06/04 13:14:34 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = C:\DATA\Nutrients\doc\Nutrients-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 19 Nitrate_plus_Nitrite umol/L 10 0.1709000E+00 0.9812000E+00 23 Phosphate umol/L 10 0.4530000E-01 0.1011500E+01 -HEADER EDITS: 2013/07/08 08:50:14 Applied edit header: C:\DATA\Nutrients\doc\headedit-correction.txt $END *COMMENTS Comments from secondary file: Q:\Cruise_Data_Processing\2010-12\Processing\hydro\2010-12-0099.mrgcln1 ----------------------------------------------------------------------- Comments from secondary file: Q:\Cruise_Data_Processing\2010-12\Processing\hydro\2010-12-0099.sal ------------------------------------------------------------------- Sample_Number 400: SAL: Outlier in COMPARE Comments from secondary file: Q:\Cruise_Data_Processing\2010-12\Processing\hydro\2010-12-0099.nut ------------------------------------------------------------------- Sample_Number 400: Nuts: SI cool dup, strange Si value Analysis methods: ----------------- Chlorophyll samples were analyzed at sea using a Chemistry Turner Designs 10AU fluorometer which was calibrated on May 12, 2009 using pure chlorophyll a. Chlorophyll precision was determined by analyzing replicate samples drawn from one Niskin. For details see worksheet “Precision” in file QF2010-12 CHL.xls. Oxygen samples were analyzed at sea using an automated Winkler titration system consisting of a Brinkmann 765 Dosimat, with a PC950 colorimeter with a 450nm filter, using the procedures of Carpenter (1965). For details and precision analysis see document 2010-12oxy.xlsx. Salinity samples were collected in glass bottles and analyzed at IOS on a Guildline model 8400B Autosal (S/N 69086) standardized with IAPSO standard seawater. See file 2009-12-salinity-duplicates.xls for information on precision and 2010-12-sals.xls for analysis output. Nutrient samples were collected in plastic tubes and most were analyzed frozen at IOS using an Astoria autoanalyzer following methods described in Barwell-Clarke and Whitney (1996). Deep Silicate samples (400m and below) were analyzed cool at IOS. For full data and details on nutrient duplicates and precision see file QF2010-12nuts.xls. Ammonia samples were analysed fresh at sea using a TD700 fluorometer. For more information including details on precision see 2010-12_NH4.xls. References: 1. Carpenter, J.H. 1965. The Chesapeake Bay Institute Technique for the Winkler Dissolved Oxygen Method. Limmnol. & Oceanogr., 10: 141-143. 2. J. Barwell-Clarke and F. Whitney. 1996. Institute of Ocean Sciences Nutrient Methods and Analysis. Canadian Technical Report of Hydrography and Ocean Sciences, No. 182, 43 pp. ********************************************************************************** Transmissometer #1005DR was calibrated in March 2008, and drifted significantly but steadily until July 2009; then a sudden shift occurred, so that maximum values between September 2009 and July 2010 were very low, ~25%/m. In August 2010 a study was made of transmissivity that led to a decision to apply post-processing corrections to all cruises between March 2008 and June 2010. Transmissivity data from this cruise were corrected by multiplying the original values by correction factor 2.44, which was based on the assumption that deep offshore transmissivity should be about 62%/m. For details on the transmissometer post-processing see: OSD_Data_Archive:\Cruise_Data\DOCUMENTS\Transmissometer 1005DR Corrections.doc These data should still be considered nominal. ********************************************************************************** July 2013: A correction has been applied to Nitrate_plus_Nitrite and Phosphate data from deep-water cruises analyzed at IOS between 2009 and 2012. For details see the following report: Corrections to Nitrate and Phosphate for Deep-Water Cruises from 2009 to 2012.pdf which is stored in folder: \\Cruise_Data\DOCUMENTS\Analysis Reference Papers *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- --------- ---- ------ ------------ Pressure dbars 10 -99 () (0.8 0.99988) Transmissivity %/metre 10 -99 () (0 2.44) Oxygen:Dissolved:SBE mL/L 10 -99 () (-0.43E-02 1.0339) Salinity:T1:C1 PSS-78 10 -99 () (-0.25E-02 1) Nitrate_plus_Nitrite umol/L 10 -99 () (0.1709 0.9812) Phosphate umol/L 10 -99 () (0.453E-01 1.0115) $END !-1-- --2--- ---3---- --4-- ---5--- --6--- --7-- ---8---- -9-- 10 ---11--- 12 --13-- 14 --15-- 16 ---17-- 18 --19- 20 --21- 22 --23-- 24 --25-- 26 !Samp Pressu Temperat Trans Fluores Oxygen Oxyge Salinity Numb Bo Salinity Fl Chloro Fl Phaeo- Fl Oxygen: Fl Nitra Fl Silic Fl Phosph Fl Ammoni Fl !le_ re ure: missi cence: : n: :T1:C1 er_o tt :Bottle ag phyll: ag Pigmen ag Dissolv ag te_ ag ate ag ate ag um ag !Numb Secondar vity URU: Dissol Disso ~bin ~u ~o Extrac ~a t: ~a ed ~o plus_ ~t ~i ~p ~o !er y Seapoin ved: lved: _rec mb tt ted ct Extrac ct lv Nitri ri ca ha ni ! t SBE SBE ords er le ed ted ed ed te te te te um !---- ------ -------- ----- ------- ------ ----- -------- ---- -- -------- -- ------ -- ------ -- ------- -- ----- -- ----- -- ------ -- ------ -- *END OF HEADER 417 5.9 10.2993 51.0 1.013 6.65 289.9 31.7600 121 20 31.7610 0 1.37 6 0.73 6 6.675 0 3.7 0 8.2 0 0.67 0 0.28 6 416 11.4 10.2935 51.2 1.051 6.66 290.1 31.7614 121 19 -99.0000 0 1.22 6 0.62 6 6.664 0 3.7 0 8.2 0 0.69 0 0.34 6 415 21.6 10.2892 53.0 0.975 6.63 289.1 31.7985 121 18 -99.0000 0 1.04 6 0.51 6 6.652 6 3.7 0 8.3 0 0.68 0 0.37 6 414 32.3 9.9455 54.7 0.881 6.62 288.3 32.0499 121 17 -99.0000 0 -99.00 0 -99.00 0 6.625 0 4.3 0 9.5 0 0.74 0 -99.00 0 413 52.7 8.6856 59.8 0.538 6.68 291.0 32.3706 121 16 -99.0000 0 -99.00 0 -99.00 0 6.696 0 6.6 0 11.7 0 0.91 0 -99.00 0 412 76.5 8.0408 60.8 0.559 6.70 291.9 32.4436 121 15 -99.0000 0 -99.00 0 -99.00 0 6.755 0 7.6 6 12.4 6 0.98 6 -99.00 0 411 101.5 7.4455 61.7 0.257 6.30 274.3 32.5805 121 14 -99.0000 0 -99.00 0 -99.00 0 6.409 0 11.1 0 14.8 0 1.04 0 -99.00 0 410 127.0 7.2714 61.0 0.055 3.47 151.0 33.3535 121 13 -99.0000 0 -99.00 0 -99.00 0 3.536 0 26.1 0 37.1 0 2.03 0 -99.00 0 409 151.6 6.6927 60.8 0.047 2.50 108.7 33.7877 121 12 -99.0000 0 -99.00 0 -99.00 0 2.541 0 32.2 0 48.8 0 2.38 0 -99.00 0 408 175.2 6.3951 61.0 0.047 2.17 94.4 33.8960 121 11 -99.0000 0 -99.00 0 -99.00 0 2.265 0 34.4 0 54.1 0 2.51 0 -99.00 0 407 199.9 6.1807 61.5 0.047 1.96 85.1 33.9373 121 10 -99.0000 0 -99.00 0 -99.00 0 1.959 6 35.9 0 57.4 0 2.60 0 -99.00 0 406 250.2 5.7881 61.7 0.047 1.54 67.0 33.9792 121 9 -99.0000 0 -99.00 0 -99.00 0 1.553 0 38.0 0 64.8 0 2.74 0 -99.00 0 405 300.8 5.3104 62.2 0.046 1.36 59.2 33.9859 121 8 -99.0000 0 -99.00 0 -99.00 0 1.359 0 39.8 0 71.9 0 2.83 0 -99.00 0 404 400.4 5.0562 62.0 0.045 0.74 32.2 34.0812 121 7 -99.0000 0 -99.00 0 -99.00 0 0.734 0 42.0 0 83.4 0 3.09 0 -99.00 0 403 501.6 4.6416 62.2 0.045 0.51 22.0 34.1348 121 6 -99.0000 0 -99.00 0 -99.00 0 0.518 0 43.3 0 94.0 0 3.17 0 -99.00 0 402 751.3 3.8710 62.0 0.047 0.26 11.4 34.2888 121 5 -99.0000 0 -99.00 0 -99.00 0 0.258 0 45.0 0 118.9 0 3.30 0 -99.00 0 401 1000.5 3.3132 61.7 0.046 0.26 11.3 34.3808 121 4 -99.0000 0 -99.00 0 -99.00 0 0.242 6 45.5 0 136.2 0 3.31 0 -99.00 0 400 1250.8 2.8571 61.2 0.045 0.38 16.6 34.4500 121 3 34.2174 4 -99.00 0 -99.00 0 0.307 0 44.4 0 105.5 63 3.23 0 -99.00 0 399 1500.4 2.4412 61.0 0.043 0.65 28.1 34.5037 121 2 34.5029 0 -99.00 0 -99.00 0 0.641 0 45.0 0 161.9 0 3.26 0 -99.00 0 398 2000.6 1.9285 60.3 0.042 1.38 59.8 34.5898 121 1 -99.0000 0 -99.00 0 -99.00 0 1.374 0 43.0 0 174.0 0 3.00 0 -99.00 0