*2014/11/20 09:57:01.06 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2010/05/30 14:59:56.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 18 DATA DESCRIPTION : Bottle:Rosette:Up:Stop + CTD:Up FILE TYPE : ASCII CRC : 4F76AB23 NUMBER OF CHANNELS : 26 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- ------------------------------ --------------- -------------- -------------- 1 Sample_Number n/a 345 362 2 Pressure decibar 6.3 1275.4 3 Temperature:Secondary 'deg C (ITS90)' 2.8423 10.3205 4 Transmissivity %/metre 49.5 61.7 5 Fluorescence:URU:Seapoint mg/m^3 0.46E-01 1.137 6 Oxygen:Dissolved:SBE mL/L 0.28 6.55 7 Oxygen:Dissolved:SBE umol/kg 12.1 285.5 8 Salinity:T1:C1 PSS-78 31.7194 34.465 9 Number_of_bin_records n/a 121 121 10 Bottle_Number n/a 1 18 11 Salinity:Bottle PSS-78 31.722 34.3885 12 Flag:Salinity:Bottle n/a 13 Chlorophyll:Extracted mg/m^3 1.31 1.37 14 Flag:Chlorophyll:Extracted n/a 15 Phaeo-Pigment:Extracted mg/m^3 0.62 0.65 16 Flag:Phaeo-Pigment:Extracted n/a 17 Oxygen:Dissolved mL/L 0.274 6.563 18 Flag:Oxygen:Dissolved n/a 19 Nitrate_plus_Nitrite umol/L 3.40886 45.50234 20 Flag:Nitrate_plus_Nitrite n/a 21 Silicate umol/L 7.2 137.3 22 Flag:Silicate n/a 23 Phosphate umol/L 0.621855 3.34279 24 Flag:Phosphate n/a 25 Ammonium umol/L 0.66 0.78 26 Flag:Ammonium n/a $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 5 I I 0 2 -99 ' ' 7 F ' ' 1 3 -99 ' ' 9 F ' ' 4 4 -99 ' ' 6 F ' ' 1 5 -99 ' ' 8 F ' ' 3 6 -99 ' ' 7 F ' ' 2 7 -99 ' ' 6 F ' ' 1 8 -99 ' ' 9 F ' ' 4 9 ' ' ' ' 5 I I 0 10 -99 ' ' 3 I I 0 11 -99 ' ' 9 F R4 4 12 0 ' ' 3 NQ C ' ' 13 -99 ' ' 7 F R4 2 14 0 ' ' 3 NQ C ' ' 15 -99 ' ' 7 F R4 2 16 0 ' ' 3 NQ C ' ' 17 -99 ' ' 8 F R4 3 18 0 ' ' 3 NQ C ' ' 19 -99 ' ' 6 F R4 1 20 0 ' ' 3 NQ C ' ' 21 -99 ' ' 6 F R4 1 22 0 ' ' 3 NQ C ' ' 23 -99 ' ' 7 F R4 2 24 0 ' ' 3 NQ C ' ' 25 -99 ' ' 7 F R4 2 26 0 ' ' 3 NQ C ' ' $END $REMARKS Flag channels initialized with zeros. Non-zero values have the following significance: -------------------------------------------------------------------------------------- 1 = Sample for this measurement was drawn from water bottle but not analyzed (not normally used). 2 = Acceptable measurement (not normally used). 3 = Questionable measurement (no problem observed in sampling or analysis, but value is not trusted, nonetheless; includes outlyers). 4 = Bad measurement (known problem with sampling or analysis, but not serious enough to completely discard the value). 5 = Not reported (lost sample; unredeemably bad measurement). 6 = Mean of replicate measurements. 7 = Manual chromatographic peak measurement. 8 = Irregular digital chromatographic peak integration. 9 = Sample not drawn for this measurement from this bottle (not normally used). -------------------------------------------------------------------------------------- $END *ADMINISTRATION MISSION : 2010-12 AGENCY : IOS, Ocean Sciences Division, Sidney, B.C. COUNTRY : Canada PROJECT : La Perouse SCIENTIST : Yelland D. PLATFORM : John P. Tully *LOCATION GEOGRAPHIC AREA : North-East Pacific STATION : LBP5 EVENT NUMBER : 88 LATITUDE : 50 0.00000 N ! (deg min) LONGITUDE : 128 0.04000 W ! (deg min) WATER DEPTH : 1280 ALTIMETER (M) : 12.92 ! custom item $REMARKS Altimeter value is distance from bottom and is calculated as the median of the deepest 2 metres of data. $END *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0506 LOCATION : Mid-ship ! custom item $REMARKS SOFTWARE VERSION SEASAVE V 7.18C $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.1 2010/08/30 15:02:06 2178 2178 CLEAN 5.0.2 2010/08/30 15:44:48 ? ? ADDSAMP 3.4 2010/08/31 08:42:24 2178 2178 BINAVE 4.1.1 2010/08/31 08:42:58 2178 18 MERGE 3.4 2010/11/04 15:35:39 18 18 CLEAN 5.0.2 2010/11/04 15:35:46 ? ? CALIB 11.7 2010/11/04 15:36:01 18 18 SORT 3.5 2010/11/04 15:36:17 18 18 REMOVECH 8.0 2010/11/04 15:37:53 18 18 CHGUNITS 3.0 2010/11/04 15:38:11 18 18 REORDER 1.2.1 2010/11/04 15:38:51 ? ? HDREDIT2 2.5.1 2010/11/04 15:39:55 ? ? CALIB 11.7 2013/06/04 13:14:34 18 18 HDREDIT2 2.6 2013/07/08 08:50:14 ? ? CHANGE_FLAGS 1.0 2013/07/29 14:31:28 18 18 CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:34:46 18 18 CHANGE_FLAGS 2.0 2014/11/20 09:57:01 18 18 $END $REMARKS -CLEAN functions: 2010/08/30 15:44:32 20 Set event to last 4 characters of file name -The following ADDSAMP parameters were used: Sample Number Lookup File: Q:\Cruise_Data_Processing\2010-12\Processing\hydro\addsamp.csv Bottle Channel Name: Bottle_Number -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -The following MERGE parameters were used: 2010/11/04 15:35:36 2010/11/04 15:35:36 2010/11/04 15:35: Merge Channel: Bottle_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Salinity:Bottle, Flag:Salinity:Bottle, Chlorophyll:Extracted, Flag:Chlorophyll:Extracted, Phaeo-Pigment:Extracted, Flag:Phaeo-Pigment:Extracted, Oxygen:Dissolved, Flag:Oxygen:Dissolved, Nitrate_plus_Nitrite, Flag:Nitrate_plus_Nitrite, Silicate, Flag:Silicate, Phosphate, Flag:Phosphate, Ammonium, Flag:Ammonium, Dimethyl_Sulphide, Flag:Dimethyl_Sulphide Primary file : Q:\Cruise_Data_Processing\2010-12\Processing\hydro\2010-12-0088.samavg Secondary file: Q:\Cruise_Data_Processing\2010-12\Processing\hydro\2010-12-0088.mrgcln1 Comments from secondary file: Q:\Cruise_Data_Processing\2010-12\Processing\hydro\2010-12-0088.mrgcln1 ----------------------------------------------------------------------- -CLEAN functions: 2010/11/04 15:35:08 20 Reduce header to sections: FIL ADM LOC DEP REC INS HIS RAW CAL COM Remarks removed from kept sections. -CLEAN functions: 2010/11/04 15:35:44 20 Remove Sea-Bird comments from the header. -CALIB parameters: 2010/11/04 15:36:01 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = Q:\Cruise_Data_Processing\2010-12\Processing\doc\2010-12-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 3 Pressure dbars 10 0.8000000E+00 0.9998800E+00 8 Transmissivity %/metre 10 0.0000000E+00 0.2440000E+01 16 Oxygen:Dissolved:SBE mL/L 10 -0.4300000E-02 0.1033900E+01 18 Salinity:T1:C1 PSS-78 10 -0.2500000E-02 0.1000000E+01 -SORT parameters: 2010/11/04 15:36:17 Sorted in ascending order of channel Pressure [dbars] -REMOVECH 2010/11/04 15:37:53 The following CHANNEL(S) were removed: Scan_Number Temperature:Primary [deg C (ITS90)] Conductivity:Primary [S/m] Conductivity:Secondary [S/m] Oxygen:Voltage:SBE [volts] PAR [uE/m^2/sec] Altimeter [metres] Descent_Rate [m/s] Status:Pump Salinity:T0:C0 [PSS-78] Flag -CHANGE units: 'Oxygen:Dissolved:SBE [mL/L]' changed from mL/L to umol/kg -HEADER EDITS: 2010/11/04 15:39:55 Applied edit header: Q:\Cruise_Data_Processing\2010-12\Processing\doc\2010-12-bot-hdr.txt Channel 2: Pressure [decibar] Units: dbars ==> decibar Channel 5: Fluorescence:URU:Seapoint [mg/m^3] Name: Fluorescence:Seapoint ==> Fluorescence:URU:Seapoint Channel 6: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 12: Flag:Salinity:Bottle [n/a] Units: ==> n/a Channel 13: Chlorophyll:Extracted [mg/m^3] Units: ==> mg/m^3 Format: F8.3 ==> F7.2 Channel 14: Flag:Chlorophyll:Extracted [n/a] Units: ==> n/a Channel 17: Oxygen:Dissolved [mL/L] Units: ==> mL/L Channel 18: Flag:Oxygen:Dissolved [n/a] Units: ==> n/a Channel 15: Phaeo-Pigment:Extracted [mg/m^3] Units: ==> mg/m^3 Channel 25: Ammonium [umol/L] Units: ==> umol/L Format: F8.4 ==> F7.2 -CALIB parameters: 2013/06/04 13:14:34 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = C:\DATA\Nutrients\doc\Nutrients-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 19 Nitrate_plus_Nitrite umol/L 10 0.1709000E+00 0.9812000E+00 23 Phosphate umol/L 10 0.4530000E-01 0.1011500E+01 -HEADER EDITS: 2013/07/08 08:50:14 Applied edit header: C:\DATA\Nutrients\doc\headedit-correction.txt $END *COMMENTS Comments from secondary file: Q:\Cruise_Data_Processing\2010-12\Processing\hydro\2010-12-0088.mrgcln1 ----------------------------------------------------------------------- Comments from secondary file: Q:\Cruise_Data_Processing\2010-12\Processing\hydro\2010-12-0088.add ------------------------------------------------------------------- Sample_Number 345: DO: Niskin didn't close Sample_Number 346: DO: vent open Sample_Number 348: DO: bad curve Comments from secondary file: Q:\Cruise_Data_Processing\2010-12\Processing\hydro\2010-12-0088.nut ------------------------------------------------------------------- Sample_Number 345: Nuts: no cool Si Sample_Number 347: Nuts: SI cool dup Analysis methods: ----------------- Chlorophyll samples were analyzed at sea using a Chemistry Turner Designs 10AU fluorometer which was calibrated on May 12, 2009 using pure chlorophyll a. Chlorophyll precision was determined by analyzing replicate samples drawn from one Niskin. For details see worksheet “Precision” in file QF2010-12 CHL.xls. Oxygen samples were analyzed at sea using an automated Winkler titration system consisting of a Brinkmann 765 Dosimat, with a PC950 colorimeter with a 450nm filter, using the procedures of Carpenter (1965). For details and precision analysis see document 2010-12oxy.xlsx. Salinity samples were collected in glass bottles and analyzed at IOS on a Guildline model 8400B Autosal (S/N 69086) standardized with IAPSO standard seawater. See file 2009-12-salinity-duplicates.xls for information on precision and 2010-12-sals.xls for analysis output. Nutrient samples were collected in plastic tubes and most were analyzed frozen at IOS using an Astoria autoanalyzer following methods described in Barwell-Clarke and Whitney (1996). Deep Silicate samples (400m and below) were analyzed cool at IOS. For full data and details on nutrient duplicates and precision see file QF2010-12nuts.xls. Ammonia samples were analysed fresh at sea using a TD700 fluorometer. For more information including details on precision see 2010-12_NH4.xls. References: 1. Carpenter, J.H. 1965. The Chesapeake Bay Institute Technique for the Winkler Dissolved Oxygen Method. Limmnol. & Oceanogr., 10: 141-143. 2. J. Barwell-Clarke and F. Whitney. 1996. Institute of Ocean Sciences Nutrient Methods and Analysis. Canadian Technical Report of Hydrography and Ocean Sciences, No. 182, 43 pp. ********************************************************************************** Transmissometer #1005DR was calibrated in March 2008, and drifted significantly but steadily until July 2009; then a sudden shift occurred, so that maximum values between September 2009 and July 2010 were very low, ~25%/m. In August 2010 a study was made of transmissivity that led to a decision to apply post-processing corrections to all cruises between March 2008 and June 2010. Transmissivity data from this cruise were corrected by multiplying the original values by correction factor 2.44, which was based on the assumption that deep offshore transmissivity should be about 62%/m. For details on the transmissometer post-processing see: OSD_Data_Archive:\Cruise_Data\DOCUMENTS\Transmissometer 1005DR Corrections.doc These data should still be considered nominal. ********************************************************************************** July 2013: A correction has been applied to Nitrate_plus_Nitrite and Phosphate data from deep-water cruises analyzed at IOS between 2009 and 2012. For details see the following report: Corrections to Nitrate and Phosphate for Deep-Water Cruises from 2009 to 2012.pdf which is stored in folder: \\Cruise_Data\DOCUMENTS\Analysis Reference Papers *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- --------- ---- ------ ------------ Pressure dbars 10 -99 () (0.8 0.99988) Transmissivity %/metre 10 -99 () (0 2.44) Oxygen:Dissolved:SBE mL/L 10 -99 () (-0.43E-02 1.0339) Salinity:T1:C1 PSS-78 10 -99 () (-0.25E-02 1) Nitrate_plus_Nitrite umol/L 10 -99 () (0.1709 0.9812) Phosphate umol/L 10 -99 () (0.453E-01 1.0115) $END !-1-- --2--- ---3---- --4-- ---5--- --6--- --7-- ---8---- -9-- 10 ---11--- 12 --13-- 14 --15-- 16 ---17-- 18 --19- 20 --21- 22 --23-- 24 --25-- 26 !Samp Pressu Temperat Trans Fluores Oxygen Oxyge Salinity Numb Bo Salinity Fl Chloro Fl Phaeo- Fl Oxygen: Fl Nitra Fl Silic Fl Phosph Fl Ammoni Fl !le_ re ure: missi cence: : n: :T1:C1 er_o tt :Bottle ag phyll: ag Pigmen ag Dissolv ag te_ ag ate ag ate ag um ag !Numb Secondar vity URU: Dissol Disso ~bin ~u ~o Extrac ~a t: ~a ed ~o plus_ ~t ~i ~p ~o !er y Seapoin ved: lved: _rec mb tt ted ct Extrac ct lv Nitri ri ca ha ni ! t SBE SBE ords er le ed ted ed ed te te te te um !---- ------ -------- ----- ------- ------ ----- -------- ---- -- -------- -- ------ -- ------ -- ------- -- ----- -- ----- -- ------ -- ------ -- *END OF HEADER 362 6.3 10.3205 49.5 1.053 6.55 285.5 31.7194 121 18 31.7220 0 1.36 6 0.64 6 6.553 0 3.4 0 7.2 0 0.62 0 0.68 6 361 11.0 10.3167 49.5 1.079 6.54 285.1 31.7209 121 17 -99.0000 0 1.37 6 0.65 6 6.563 0 3.5 0 7.2 0 0.65 0 0.66 6 360 21.0 10.3165 49.8 1.137 6.53 284.8 31.7203 121 16 -99.0000 0 1.31 6 0.62 6 6.542 0 3.6 0 7.3 0 0.68 0 0.78 6 359 30.7 9.9180 53.7 0.825 6.30 274.5 31.7857 121 15 -99.0000 0 -99.00 0 -99.00 0 6.352 0 4.4 0 8.2 0 0.75 0 -99.00 0 358 51.0 9.2304 55.4 0.216 5.57 242.4 32.1674 121 14 -99.0000 0 -99.00 0 -99.00 0 5.612 0 9.5 0 15.2 0 1.09 0 -99.00 0 357 76.3 7.8721 59.8 0.082 4.57 198.8 32.9060 121 13 -99.0000 0 -99.00 0 -99.00 0 4.595 0 19.0 6 26.1 6 1.60 6 -99.00 0 356 100.8 7.2690 59.5 0.062 3.20 139.2 33.5216 121 12 -99.0000 0 -99.00 0 -99.00 0 3.216 0 28.3 0 38.0 0 2.13 0 -99.00 0 355 126.3 7.1779 58.3 0.062 2.88 125.4 33.6446 121 11 -99.0000 0 -99.00 0 -99.00 0 2.900 0 30.3 0 41.0 0 2.23 0 -99.00 0 354 151.2 6.9992 59.8 0.051 2.65 115.5 33.7988 121 10 -99.0000 0 -99.00 0 -99.00 0 2.670 0 32.0 0 43.8 0 3.26 3 -99.00 0 353 175.9 6.7702 59.0 0.050 2.39 104.1 33.8643 121 9 -99.0000 0 -99.00 0 -99.00 0 2.415 0 33.6 0 48.3 0 2.41 0 -99.00 0 352 200.4 6.6138 59.3 0.051 2.19 95.3 33.8828 121 8 -99.0000 0 -99.00 0 -99.00 0 2.194 0 33.4 0 49.9 0 2.42 0 -99.00 0 351 251.1 6.3084 60.3 0.049 1.96 85.1 33.9340 121 7 -99.0000 0 -99.00 0 -99.00 0 1.992 6 36.1 0 56.1 0 2.49 0 -99.00 0 350 300.1 5.8628 61.5 0.047 1.51 65.7 33.9792 121 6 -99.0000 0 -99.00 0 -99.00 0 1.523 0 36.2 0 56.1 0 2.58 0 -99.00 0 349 401.0 5.2977 61.7 0.049 0.90 39.2 34.0576 121 5 -99.0000 0 -99.00 0 -99.00 0 0.896 0 38.3 0 78.1 0 2.76 0 -99.00 0 348 501.3 4.8947 61.5 0.046 0.63 27.3 34.1130 121 4 -99.0000 0 -99.00 0 -99.00 0 0.609 2 41.9 0 88.8 0 3.01 0 -99.00 0 347 751.7 4.0150 61.0 0.048 0.28 12.1 34.2820 121 3 34.2818 0 -99.00 0 -99.00 0 0.274 0 43.1 0 116.2 6 3.15 0 -99.00 0 346 1001.5 3.3685 58.8 0.049 0.34 14.8 34.3897 121 2 34.3885 0 -99.00 0 -99.00 0 0.333 46 45.0 0 137.3 0 3.31 0 -99.00 0 345 1275.4 2.8423 54.4 0.055 0.50 21.9 34.4650 121 1 -99.0000 0 -99.00 0 -99.00 0 -99.000 9 45.5 0 133.6 0 3.34 0 -99.00 0