*2009/03/03 17:21:02.03 *IOS HEADER VERSION 1.8 2007/05/25 2007/05/25 *FILE START TIME : UTC 2008/11/06 22:11:33.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 73 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 56D2B81 NUMBER OF CHANNELS : 7 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Pressure decibar 4.2 75.9 2 Temperature:Primary 'deg C (ITS90)' 8.6441 8.9711 3 Fluorescence:URU:Seapoint mg/m^3 0.375 0.88 4 Salinity:T0:C0 PSS-78 31.4893 32.3031 5 Oxygen:Dissolved:SBE mL/L 3.43 5.27 6 Number_of_bin_records n/a 18 47 7 Oxygen:Dissolved:SBE umol/kg 149.3812 229.6642 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 7 F ' ' 2 6 ' ' ' ' 5 I I 0 7 -99 ' ' 6 F ' ' 1 $END $REMARKS This file converted from Sea-Bird file: Q:\Cruise_Data_Processing\2008-15\Pro Comments from secondary file: Q:\Cruise_Data_Processing\2008-15\Processing\align\2008-15-0365.delo -------------------------------------------------------------------- This file converted from Sea-Bird file: Q:\Cruise_Data_Processing\2008-15\Pro $END *ADMINISTRATION MISSION : 2008-15 AGENCY : PBS, Ocean Science and Productivity, Nanaimo, B.C. COUNTRY : Canada PROJECT : High Seas Salmon SCIENTIST : Trudel M. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : SoG/JdeF/WCVI/North Coast STATION : JF06 EVENT NUMBER : 365 LATITUDE : 48 27.76000 N ! (deg min) LONGITUDE : 124 19.40000 W ! (deg min) WATER DEPTH : 85 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0506 $TABLE: SENSORS ! Name Abs Depth Serial No ! ------------------------- -------------- ---------- temperature:primary ' ' 4752 conductivity:primary ' ' 2173 pressure ' ' 0506 temperature:secondary ' ' 2968 conductivity:secondary ' ' 3038 Fluorometer ' ' Seapoint transmissometer:primary ' ' 953DR Oxygen:SBE ' ' 0047 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.16A Comments from secondary file: Q:\Cruise_Data_Processing\2008-15\Processing\align\2008-15-0365.delo -------------------------------------------------------------------- SOFTWARE VERSION SEASAVE V 7.16A $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.1 2009/01/30 17:12:10 9388 9388 CLEAN 5.0.2 2009/01/30 18:22:03 ? ? MERGEHDR 1.1 2009/01/31 15:20:14 9330 9330 SHIFTDAT 3.4 2009/01/31 17:51:51 9330 9330 SHIFTDAT 3.4 2009/02/02 12:21:11 9330 9330 DELETE 6.3 2009/02/02 12:55:34 9330 1997 CTDEDIT 4.61 2009/02/06 15:53:33 1997 1910 REMOVECH 8.0 2009/02/07 13:58:32 1910 1910 MERGE 3.3 2009/02/07 14:09:35 1910 1910 CALIB 11.7 2009/02/07 15:51:14 1910 1910 FILTERS 4.3 2009/02/07 16:01:03 1910 1910 BINAVE 4.1.1 2009/02/07 16:05:24 1910 73 REMOVECH 8.0 2009/02/07 16:20:44 73 73 HDREDIT2 2.5.1 2009/02/07 16:40:24 ? ? CHGUNITS 3.0 2009/03/03 17:21:02 73 73 $END $REMARKS -CLEAN functions: 2009/01/30 18:02:49 20 Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:Seapoint # of Records to Advance (-ve for Delay): At REC# 0 Shift= 24.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 66.35 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT 2009/02/06 15:53:33 87 records were deleted in this editing session. 6 changes in channel Salinity:T0:C0 -REMOVECH 2009/02/07 13:58:32 2 channels removed. -The following MERGE parameters were used: 2009/02/07 14:08:28 2009/02/07 14:08:39 2009/02/07 14:08: Merge Channel: Scan_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Oxygen:Voltage:SBE, Oxygen:Dissolved:SBE Primary file : Q:\Cruise_Data_Processing\2008-15\Processing\align\2008-15-0365.remo Secondary file: Q:\Cruise_Data_Processing\2008-15\Processing\align\2008-15-0365.delo Comments from secondary file: Q:\Cruise_Data_Processing\2008-15\Processing\align\2008-15-0365.delo -------------------------------------------------------------------- -CLEAN functions: 2009/01/30 18:02:49 20 Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:Seapoint # of Records to Advance (-ve for Delay): At REC# 0 Shift= 24.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Oxygen:Dissolved:SBE # of Records to Advance (-ve for Delay): At REC# 0 Shift= 60.00 -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 66.35 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CALIB parameters: 2009/02/07 15:51:14 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = Q:\Cruise_Data_Processing\2008-15\Processing\doc\2008-15-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 15 Oxygen:Dissolved:SBE mL/L 10 -0.1940000E-01 0.1063300E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2009/02/07 16:20:44 10 channels removed. -HEADER EDITS: 2009/02/07 16:40:24 Applied edit header: Q:\Cruise_Data_Processing\2008-15\Processing\doc\2008-15-hdr-leg2.txt Channel 1: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 3: Fluorescence:URU:Seapoint [mg/m^3] Name: Fluorescence:Seapoint ==> Fluorescence:URU:Seapoint Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 -CHANGE units: 'Oxygen:Dissolved:SBE' changed from mL/L to umol/kg $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\DATA\2008\2008-15\2008-15-365.hex Software Version Seasave V 7.16a Temperature SN = 4752 Conductivity SN = 2173 Number of Bytes Per Scan = 31 Number of Voltage Words = 2 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Nov 06 2008 22:09:37 NMEA Latitude = 48 27.76 N NMEA Longitude = 124 19.40 W NMEA UTC (Time) = Nov 06 2008 22:11:33 Store Lat/Lon Data = Append to Every Scan Ship: Ricker Station: jf06 Operator: Hugh # nquan = 15 # nvalues = 9388 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = xmiss: Beam Transmission, Chelsea/Seatech/Wetlab CStar [%] # name 7 = flSP: Fluorescence, Seapoint # name 8 = sbeox0V: Oxygen Voltage, SBE 43 # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity [PSU] # name 12 = sal11: Salinity, 2 [PSU] # name 13 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 14 = flag: flag # span 0 = 1, 9388 # span 1 = -0.357, 76.348 # span 2 = 8.6400, 9.9300 # span 3 = 8.6401, 10.1422 # span 4 = -0.476422, 3.428713 # span 5 = 99.000000, 99.000000 # span 6 = -0.6249, 13.2581 # span 7 = 0.0000e+00, 3.9267e+00 # span 8 = 1.9023, 3.2466 # span 9 = -1.229, 1.260 # span 10 = 0, 1 # span 11 = 0.0000, 32.3099 # span 12 = 0.0000, 2000.0000 # span 13 = 3.21992, 7.75062 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Nov 06 2008 22:09:37 # bad_flag = -9.990e-29 # sensor 0 = Frequency 0 temperature, primary, 4752, 06-Mar-07 # sensor 1 = Frequency 1 conductivity, primary, 2173, 07 May 08, cpcor = -9.57 00e-08 # sensor 2 = Frequency 2 pressure, 0506, 26-May-06 # sensor 3 = Frequency 3 temperature, secondary, 2968, 22-Aug-07 # sensor 4 = Frequency 4 conductivity, secondary, 3038, 11-Oct-07, cpcor = -9. 5700e-08 # sensor 5 = Extrnl Volt 0 Fluorometer, Seapoint, primary # sensor 6 = Extrnl Volt 2 transmissometer, primary, 953DR, 22-Apr-07 # sensor 7 = Extrnl Volt 3 Oxygen, SBE, primary, 0047, 01-Jun-07 # datcnv_date = Jan 30 2009 09:29:37, 7.18 # datcnv_in = Q:\Cruise_Data_Processing\2008-15\RAW\CTD\2008-15-0365.hex Q:\Crui se_Data_Processing\2008-15\Processing\doc\2008-15-ctd2.CON # datcnv_skipover = 0 # wildedit_date = Jan 30 2009 10:03:44, 7.18 # wildedit_in = Q:\Cruise_Data_Processing\2008-15\Processing\convert\2008-15-036 5.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # celltm_date = Jan 30 2009 15:04:23, 7.18 # celltm_in = Q:\Cruise_Data_Processing\2008-15\Processing\wildedit\2008-15-0365 .cnv # celltm_alpha = 0.0300, 0.0000 # celltm_tau = 9.0000, 0.0000 # celltm_temp_sensor_use_for_cond = primary, # Derive_date = Jan 30 2009 15:17:23, 7.18 # Derive_in = Q:\Cruise_Data_Processing\2008-15\Processing\celltm\2008-15-0365.c nv Q:\Cruise_Data_Processing\2008-15\Processing\doc\2008-15-ctd1.CON # derive_time_window_docdt = seconds: 2 # file_type = ascii END* CTDEDIT was used to remove surface records and a few records corrupted by shed wakes; salinity was cleaned lightly. Comments from secondary file: Q:\Cruise_Data_Processing\2008-15\Processing\align\2008-15-0365.delo -------------------------------------------------------------------- SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\DATA\2008\2008-15\2008-15-365.hex Software Version Seasave V 7.16a Temperature SN = 4752 Conductivity SN = 2173 Number of Bytes Per Scan = 31 Number of Voltage Words = 2 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Nov 06 2008 22:09:37 NMEA Latitude = 48 27.76 N NMEA Longitude = 124 19.40 W NMEA UTC (Time) = Nov 06 2008 22:11:33 Store Lat/Lon Data = Append to Every Scan Ship: Ricker Station: jf06 Operator: Hugh # nquan = 15 # nvalues = 9388 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = xmiss: Beam Transmission, Chelsea/Seatech/Wetlab CStar [%] # name 7 = flSP: Fluorescence, Seapoint # name 8 = sbeox0V: Oxygen Voltage, SBE 43 # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity [PSU] # name 12 = sal11: Salinity, 2 [PSU] # name 13 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 14 = flag: flag # span 0 = 1, 9388 # span 1 = -0.357, 76.348 # span 2 = 8.6400, 9.9300 # span 3 = 8.6401, 10.1422 # span 4 = -0.476422, 3.428713 # span 5 = 99.000000, 99.000000 # span 6 = -0.6249, 13.2581 # span 7 = 0.0000e+00, 3.9267e+00 # span 8 = 1.9023, 3.2466 # span 9 = -1.229, 1.260 # span 10 = 0, 1 # span 11 = 0.0000, 32.3099 # span 12 = 0.0000, 2000.0000 # span 13 = 3.21992, 7.75062 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Nov 06 2008 22:09:37 # bad_flag = -9.990e-29 # sensor 0 = Frequency 0 temperature, primary, 4752, 06-Mar-07 # sensor 1 = Frequency 1 conductivity, primary, 2173, 07 May 08, cpcor = -9.57 00e-08 # sensor 2 = Frequency 2 pressure, 0506, 26-May-06 # sensor 3 = Frequency 3 temperature, secondary, 2968, 22-Aug-07 # sensor 4 = Frequency 4 conductivity, secondary, 3038, 11-Oct-07, cpcor = -9. 5700e-08 # sensor 5 = Extrnl Volt 0 Fluorometer, Seapoint, primary # sensor 6 = Extrnl Volt 2 transmissometer, primary, 953DR, 22-Apr-07 # sensor 7 = Extrnl Volt 3 Oxygen, SBE, primary, 0047, 01-Jun-07 # datcnv_date = Jan 30 2009 09:29:37, 7.18 # datcnv_in = Q:\Cruise_Data_Processing\2008-15\RAW\CTD\2008-15-0365.hex Q:\Crui se_Data_Processing\2008-15\Processing\doc\2008-15-ctd2.CON # datcnv_skipover = 0 # wildedit_date = Jan 30 2009 10:03:44, 7.18 # wildedit_in = Q:\Cruise_Data_Processing\2008-15\Processing\convert\2008-15-036 5.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # celltm_date = Jan 30 2009 15:04:23, 7.18 # celltm_in = Q:\Cruise_Data_Processing\2008-15\Processing\wildedit\2008-15-0365 .cnv # celltm_alpha = 0.0300, 0.0000 # celltm_tau = 9.0000, 0.0000 # celltm_temp_sensor_use_for_cond = primary, # Derive_date = Jan 30 2009 15:17:23, 7.18 # Derive_in = Q:\Cruise_Data_Processing\2008-15\Processing\celltm\2008-15-0365.c nv Q:\Cruise_Data_Processing\2008-15\Processing\doc\2008-15-ctd1.CON # derive_time_window_docdt = seconds: 2 # file_type = ascii END* ******************************************************************* The fluorescence data are nominal and unedited except that some records were removed in editing T and S. The transmissometer malfunctioned so no useful data are available. There were no DO bottle samples available so the Dissolved Oxygen data were recalibrated using the results of another cruise that used the same sensor. ******************************************************************* *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (-0.194E-01 1.0633) $END !--1--- ---2---- ---3--- ---4---- --5--- -6-- --7-- !Pressu Temperat Fluores Salinity Oxygen Numb Oxyge !re ure: cence: :T0:C0 : er_o n: ! Primary URU: Dissol ~bin Disso ! Seapoin ved: _rec lved: ! t SBE ords SBE !------ -------- ------- -------- ------ ---- ----- *END OF HEADER 4.2 8.8898 0.873 31.5045 5.27 24 229.7 4.9 8.8901 0.880 31.4893 5.26 26 229.2 6.1 8.8883 0.873 31.6329 5.15 23 224.4 7.1 8.8728 0.834 31.7102 5.12 36 223.1 8.0 8.8696 0.812 31.7197 5.12 39 223.1 9.0 8.8720 0.806 31.7277 5.13 26 223.5 10.0 8.9395 0.734 31.7749 5.11 26 222.6 11.0 8.9711 0.701 31.8225 5.04 21 219.6 12.0 8.9369 0.707 31.8955 4.93 29 214.8 13.0 8.9124 0.738 31.9194 4.84 26 210.9 14.0 8.8928 0.662 31.9302 4.70 23 204.8 15.0 8.8387 0.664 31.9662 4.57 19 199.1 16.0 8.7983 0.634 32.0056 4.50 24 196.0 17.0 8.7883 0.635 32.0192 4.44 31 193.4 18.0 8.7716 0.628 32.0636 4.41 29 192.1 19.0 8.7696 0.597 32.0657 4.40 25 191.7 20.0 8.7670 0.587 32.0678 4.39 23 191.2 21.0 8.7643 0.566 32.0704 4.39 21 191.2 22.0 8.7617 0.558 32.0732 4.37 23 190.4 23.0 8.7606 0.545 32.0758 4.34 24 189.0 24.0 8.7610 0.535 32.0808 4.30 27 187.3 25.0 8.7620 0.524 32.0838 4.24 26 184.7 26.0 8.7649 0.516 32.0882 4.20 23 182.9 27.0 8.7662 0.521 32.0924 4.14 25 180.3 28.0 8.7643 0.516 32.0984 4.08 38 177.7 29.0 8.7607 0.487 32.1050 4.03 30 175.5 30.0 8.7501 0.474 32.1093 4.00 20 174.2 31.0 8.7441 0.459 32.1145 3.97 20 172.9 32.0 8.7402 0.469 32.1169 3.96 23 172.5 33.0 8.7401 0.454 32.1178 3.95 28 172.1 34.0 8.7399 0.461 32.1183 3.94 26 171.6 35.0 8.7400 0.465 32.1193 3.93 22 171.2 36.0 8.7397 0.464 32.1216 3.91 23 170.3 37.0 8.7401 0.440 32.1245 3.89 25 169.4 38.0 8.7409 0.446 32.1252 3.88 29 169.0 39.0 8.7401 0.449 32.1303 3.87 36 168.6 40.0 8.7401 0.462 32.1307 3.86 26 168.1 41.0 8.7399 0.439 32.1312 3.86 21 168.1 42.0 8.7402 0.429 32.1317 3.86 20 168.1 43.0 8.7415 0.437 32.1313 3.86 23 168.1 44.0 8.7416 0.439 32.1319 3.87 28 168.6 45.0 8.7416 0.454 32.1327 3.86 26 168.1 46.0 8.7428 0.470 32.1343 3.87 26 168.6 47.0 8.7435 0.456 32.1340 3.86 28 168.1 48.0 8.7431 0.454 32.1357 3.83 22 166.8 49.0 8.7403 0.442 32.1419 3.82 24 166.4 50.0 8.7399 0.442 32.1431 3.82 24 166.4 51.0 8.7396 0.459 32.1443 3.82 24 166.4 52.0 8.7394 0.440 32.1451 3.80 28 165.5 53.0 8.7371 0.443 32.1516 3.77 30 164.2 54.0 8.7340 0.451 32.1588 3.73 27 162.5 55.0 8.7309 0.464 32.1657 3.68 27 160.3 56.0 8.7260 0.419 32.1756 3.65 26 159.0 57.0 8.7242 0.413 32.1790 3.64 22 158.5 58.0 8.7243 0.424 32.1788 3.62 22 157.7 59.0 8.7201 0.417 32.1871 3.56 25 155.1 60.0 8.7032 0.390 32.2166 3.52 28 153.3 61.0 8.6924 0.385 32.2331 3.51 33 152.9 62.0 8.6810 0.395 32.2499 3.49 30 152.0 63.0 8.6816 0.387 32.2499 3.49 23 152.0 64.0 8.6806 0.385 32.2513 3.49 20 152.0 65.0 8.6837 0.381 32.2472 3.49 19 152.0 66.0 8.6832 0.387 32.2484 3.49 21 152.0 67.0 8.6821 0.392 32.2501 3.49 31 152.0 68.0 8.6809 0.386 32.2518 3.49 34 152.0 69.0 8.6794 0.403 32.2537 3.49 23 152.0 70.0 8.6776 0.380 32.2561 3.49 26 152.0 71.0 8.6677 0.386 32.2693 3.48 35 151.6 72.0 8.6557 0.380 32.2860 3.47 25 151.1 73.0 8.6543 0.396 32.2880 3.46 18 150.7 74.0 8.6511 0.375 32.2929 3.45 23 150.3 75.0 8.6466 0.377 32.2995 3.44 33 149.8 75.9 8.6441 0.379 32.3031 3.43 47 149.4