*2009/03/03 17:21:01.90 *IOS HEADER VERSION 1.8 2007/05/25 2007/05/25 *FILE START TIME : UTC 2008/11/06 20:32:36.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 69 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : 41AFEC31 NUMBER OF CHANNELS : 7 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Pressure decibar 3.4 70.5 2 Temperature:Primary 'deg C (ITS90)' 8.5796 9.0412 3 Fluorescence:URU:Seapoint mg/m^3 0.403 0.811 4 Salinity:T0:C0 PSS-78 31.8673 32.3975 5 Oxygen:Dissolved:SBE mL/L 3.6 5.06 6 Number_of_bin_records n/a 2 49 7 Oxygen:Dissolved:SBE umol/kg 156.7722 220.4525 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 7 F ' ' 2 6 ' ' ' ' 5 I I 0 7 -99 ' ' 6 F ' ' 1 $END $REMARKS This file converted from Sea-Bird file: Q:\Cruise_Data_Processing\2008-15\Pro Comments from secondary file: Q:\Cruise_Data_Processing\2008-15\Processing\align\2008-15-0362.delo -------------------------------------------------------------------- This file converted from Sea-Bird file: Q:\Cruise_Data_Processing\2008-15\Pro $END *ADMINISTRATION MISSION : 2008-15 AGENCY : PBS, Ocean Science and Productivity, Nanaimo, B.C. COUNTRY : Canada PROJECT : High Seas Salmon SCIENTIST : Trudel M. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : SoG/JdeF/WCVI/North Coast STATION : JF05 EVENT NUMBER : 362 LATITUDE : 48 25.39000 N ! (deg min) LONGITUDE : 124 10.42000 W ! (deg min) WATER DEPTH : 83 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0506 $TABLE: SENSORS ! Name Abs Depth Serial No ! ------------------------- -------------- ---------- temperature:primary ' ' 4752 conductivity:primary ' ' 2173 pressure ' ' 0506 temperature:secondary ' ' 2968 conductivity:secondary ' ' 3038 Fluorometer ' ' Seapoint transmissometer:primary ' ' 953DR Oxygen:SBE ' ' 0047 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.16A Comments from secondary file: Q:\Cruise_Data_Processing\2008-15\Processing\align\2008-15-0362.delo -------------------------------------------------------------------- SOFTWARE VERSION SEASAVE V 7.16A $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.1 2009/01/30 17:12:04 8907 8907 CLEAN 5.0.2 2009/01/30 18:21:56 ? ? MERGEHDR 1.1 2009/01/31 15:20:08 8875 8875 SHIFTDAT 3.4 2009/01/31 17:51:45 8875 8875 SHIFTDAT 3.4 2009/02/02 12:21:05 8875 8875 DELETE 6.3 2009/02/02 12:55:30 8875 2002 CTDEDIT 4.61 2009/02/06 15:47:57 2002 1816 REMOVECH 8.0 2009/02/07 13:58:23 1816 1816 MERGE 3.3 2009/02/07 14:09:32 1816 1816 CALIB 11.7 2009/02/07 15:51:12 1816 1816 FILTERS 4.3 2009/02/07 16:01:01 1816 1816 BINAVE 4.1.1 2009/02/07 16:05:23 1816 69 REMOVECH 8.0 2009/02/07 16:20:44 69 69 HDREDIT2 2.5.1 2009/02/07 16:40:24 ? ? CHGUNITS 3.0 2009/03/03 17:21:01 69 69 $END $REMARKS -CLEAN functions: 2009/01/30 18:02:49 20 Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:Seapoint # of Records to Advance (-ve for Delay): At REC# 0 Shift= 24.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 62.08 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT 2009/02/06 15:47:57 186 records were deleted in this editing session. 20 changes in channel Salinity:T0:C0 -REMOVECH 2009/02/07 13:58:23 2 channels removed. -The following MERGE parameters were used: 2009/02/07 14:08:28 2009/02/07 14:08:39 2009/02/07 14:08: Merge Channel: Scan_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Oxygen:Voltage:SBE, Oxygen:Dissolved:SBE Primary file : Q:\Cruise_Data_Processing\2008-15\Processing\align\2008-15-0362.remo Secondary file: Q:\Cruise_Data_Processing\2008-15\Processing\align\2008-15-0362.delo Comments from secondary file: Q:\Cruise_Data_Processing\2008-15\Processing\align\2008-15-0362.delo -------------------------------------------------------------------- -CLEAN functions: 2009/01/30 18:02:49 20 Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:Seapoint # of Records to Advance (-ve for Delay): At REC# 0 Shift= 24.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Oxygen:Dissolved:SBE # of Records to Advance (-ve for Delay): At REC# 0 Shift= 60.00 -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 62.08 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CALIB parameters: 2009/02/07 15:51:12 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = Q:\Cruise_Data_Processing\2008-15\Processing\doc\2008-15-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 15 Oxygen:Dissolved:SBE mL/L 10 -0.1940000E-01 0.1063300E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2009/02/07 16:20:44 10 channels removed. -HEADER EDITS: 2009/02/07 16:40:24 Applied edit header: Q:\Cruise_Data_Processing\2008-15\Processing\doc\2008-15-hdr-leg2.txt Channel 1: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 3: Fluorescence:URU:Seapoint [mg/m^3] Name: Fluorescence:Seapoint ==> Fluorescence:URU:Seapoint Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 -CHANGE units: 'Oxygen:Dissolved:SBE' changed from mL/L to umol/kg $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\DATA\2008\2008-15\2008-15-362.hex Software Version Seasave V 7.16a Temperature SN = 4752 Conductivity SN = 2173 Number of Bytes Per Scan = 31 Number of Voltage Words = 2 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Nov 06 2008 20:30:40 NMEA Latitude = 48 25.39 N NMEA Longitude = 124 10.42 W NMEA UTC (Time) = Nov 06 2008 20:32:36 Store Lat/Lon Data = Append to Every Scan Ship: Ricker Station: jf05 Operator: Hugh # nquan = 15 # nvalues = 8907 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = xmiss: Beam Transmission, Chelsea/Seatech/Wetlab CStar [%] # name 7 = flSP: Fluorescence, Seapoint # name 8 = sbeox0V: Oxygen Voltage, SBE 43 # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity [PSU] # name 12 = sal11: Salinity, 2 [PSU] # name 13 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 14 = flag: flag # span 0 = 1, 8907 # span 1 = 1.627, 72.083 # span 2 = 8.5645, 9.0831 # span 3 = 8.5659, 9.1086 # span 4 = 3.407213, 3.432985 # span 5 = 99.000000, 99.000000 # span 6 = -0.9068, 0.2678 # span 7 = 3.8462e-01, 2.4505e+00 # span 8 = 1.8376, 2.5873 # span 9 = -1.127, 1.144 # span 10 = 0, 1 # span 11 = 31.7659, 32.4233 # span 12 = 2000.0000, 2000.0000 # span 13 = 2.99594, 4.88939 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Nov 06 2008 20:30:40 # bad_flag = -9.990e-29 # sensor 0 = Frequency 0 temperature, primary, 4752, 06-Mar-07 # sensor 1 = Frequency 1 conductivity, primary, 2173, 07 May 08, cpcor = -9.57 00e-08 # sensor 2 = Frequency 2 pressure, 0506, 26-May-06 # sensor 3 = Frequency 3 temperature, secondary, 2968, 22-Aug-07 # sensor 4 = Frequency 4 conductivity, secondary, 3038, 11-Oct-07, cpcor = -9. 5700e-08 # sensor 5 = Extrnl Volt 0 Fluorometer, Seapoint, primary # sensor 6 = Extrnl Volt 2 transmissometer, primary, 953DR, 22-Apr-07 # sensor 7 = Extrnl Volt 3 Oxygen, SBE, primary, 0047, 01-Jun-07 # datcnv_date = Jan 30 2009 09:29:37, 7.18 # datcnv_in = Q:\Cruise_Data_Processing\2008-15\RAW\CTD\2008-15-0362.hex Q:\Crui se_Data_Processing\2008-15\Processing\doc\2008-15-ctd2.CON # datcnv_skipover = 0 # wildedit_date = Jan 30 2009 10:03:43, 7.18 # wildedit_in = Q:\Cruise_Data_Processing\2008-15\Processing\convert\2008-15-036 2.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # celltm_date = Jan 30 2009 15:04:22, 7.18 # celltm_in = Q:\Cruise_Data_Processing\2008-15\Processing\wildedit\2008-15-0362 .cnv # celltm_alpha = 0.0300, 0.0000 # celltm_tau = 9.0000, 0.0000 # celltm_temp_sensor_use_for_cond = primary, # Derive_date = Jan 30 2009 15:17:22, 7.18 # Derive_in = Q:\Cruise_Data_Processing\2008-15\Processing\celltm\2008-15-0362.c nv Q:\Cruise_Data_Processing\2008-15\Processing\doc\2008-15-ctd1.CON # derive_time_window_docdt = seconds: 2 # file_type = ascii END* CTDEDIT was used to remove surface records and a few records corrupted by shed wakes; salinity was cleaned lightly. Comments from secondary file: Q:\Cruise_Data_Processing\2008-15\Processing\align\2008-15-0362.delo -------------------------------------------------------------------- SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\DATA\2008\2008-15\2008-15-362.hex Software Version Seasave V 7.16a Temperature SN = 4752 Conductivity SN = 2173 Number of Bytes Per Scan = 31 Number of Voltage Words = 2 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Nov 06 2008 20:30:40 NMEA Latitude = 48 25.39 N NMEA Longitude = 124 10.42 W NMEA UTC (Time) = Nov 06 2008 20:32:36 Store Lat/Lon Data = Append to Every Scan Ship: Ricker Station: jf05 Operator: Hugh # nquan = 15 # nvalues = 8907 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = xmiss: Beam Transmission, Chelsea/Seatech/Wetlab CStar [%] # name 7 = flSP: Fluorescence, Seapoint # name 8 = sbeox0V: Oxygen Voltage, SBE 43 # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity [PSU] # name 12 = sal11: Salinity, 2 [PSU] # name 13 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 14 = flag: flag # span 0 = 1, 8907 # span 1 = 1.627, 72.083 # span 2 = 8.5645, 9.0831 # span 3 = 8.5659, 9.1086 # span 4 = 3.407213, 3.432985 # span 5 = 99.000000, 99.000000 # span 6 = -0.9068, 0.2678 # span 7 = 3.8462e-01, 2.4505e+00 # span 8 = 1.8376, 2.5873 # span 9 = -1.127, 1.144 # span 10 = 0, 1 # span 11 = 31.7659, 32.4233 # span 12 = 2000.0000, 2000.0000 # span 13 = 2.99594, 4.88939 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Nov 06 2008 20:30:40 # bad_flag = -9.990e-29 # sensor 0 = Frequency 0 temperature, primary, 4752, 06-Mar-07 # sensor 1 = Frequency 1 conductivity, primary, 2173, 07 May 08, cpcor = -9.57 00e-08 # sensor 2 = Frequency 2 pressure, 0506, 26-May-06 # sensor 3 = Frequency 3 temperature, secondary, 2968, 22-Aug-07 # sensor 4 = Frequency 4 conductivity, secondary, 3038, 11-Oct-07, cpcor = -9. 5700e-08 # sensor 5 = Extrnl Volt 0 Fluorometer, Seapoint, primary # sensor 6 = Extrnl Volt 2 transmissometer, primary, 953DR, 22-Apr-07 # sensor 7 = Extrnl Volt 3 Oxygen, SBE, primary, 0047, 01-Jun-07 # datcnv_date = Jan 30 2009 09:29:37, 7.18 # datcnv_in = Q:\Cruise_Data_Processing\2008-15\RAW\CTD\2008-15-0362.hex Q:\Crui se_Data_Processing\2008-15\Processing\doc\2008-15-ctd2.CON # datcnv_skipover = 0 # wildedit_date = Jan 30 2009 10:03:43, 7.18 # wildedit_in = Q:\Cruise_Data_Processing\2008-15\Processing\convert\2008-15-036 2.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # celltm_date = Jan 30 2009 15:04:22, 7.18 # celltm_in = Q:\Cruise_Data_Processing\2008-15\Processing\wildedit\2008-15-0362 .cnv # celltm_alpha = 0.0300, 0.0000 # celltm_tau = 9.0000, 0.0000 # celltm_temp_sensor_use_for_cond = primary, # Derive_date = Jan 30 2009 15:17:22, 7.18 # Derive_in = Q:\Cruise_Data_Processing\2008-15\Processing\celltm\2008-15-0362.c nv Q:\Cruise_Data_Processing\2008-15\Processing\doc\2008-15-ctd1.CON # derive_time_window_docdt = seconds: 2 # file_type = ascii END* ******************************************************************* The fluorescence data are nominal and unedited except that some records were removed in editing T and S. The transmissometer malfunctioned so no useful data are available. There were no DO bottle samples available so the Dissolved Oxygen data were recalibrated using the results of another cruise that used the same sensor. ******************************************************************* *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (-0.194E-01 1.0633) $END !--1--- ---2---- ---3--- ---4---- --5--- -6-- --7-- !Pressu Temperat Fluores Salinity Oxygen Numb Oxyge !re ure: cence: :T0:C0 : er_o n: ! Primary URU: Dissol ~bin Disso ! Seapoin ved: _rec lved: ! t SBE ords SBE !------ -------- ------- -------- ------ ---- ----- *END OF HEADER 3.4 9.0331 0.779 31.8888 5.06 10 220.5 4.0 9.0311 0.762 31.8986 5.04 33 219.6 5.1 9.0372 0.775 31.8673 5.05 34 220.0 5.9 9.0381 0.789 31.8981 5.04 49 219.6 7.0 9.0412 0.774 31.9007 5.02 27 218.7 8.0 9.0330 0.734 31.9472 4.98 21 217.0 9.0 9.0059 0.784 31.9673 4.96 28 216.1 10.0 9.0093 0.811 31.9481 4.96 42 216.1 11.0 9.0093 0.786 31.9440 4.96 26 216.1 12.0 9.0010 0.757 31.9525 4.95 24 215.6 13.1 8.9990 0.763 31.9609 4.93 24 214.8 14.0 8.9999 0.769 31.9576 4.93 40 214.8 15.0 8.9825 0.771 31.9814 4.91 32 213.9 16.0 8.9728 0.723 31.9939 4.88 19 212.6 17.0 8.9584 0.731 32.0107 4.85 22 211.3 18.0 8.9436 0.696 32.0248 4.84 27 210.8 19.0 8.9389 0.665 32.0255 4.83 30 210.4 20.0 8.9305 0.663 32.0265 4.80 26 209.1 21.0 8.9164 0.647 32.0269 4.76 26 207.4 22.0 8.8832 0.625 32.0374 4.73 25 206.0 23.0 8.8764 0.633 32.0510 4.72 25 205.6 24.0 8.8761 0.633 32.0548 4.70 27 204.7 25.0 8.8686 0.575 32.0591 4.63 27 201.7 26.0 8.8391 0.599 32.0606 4.55 21 198.2 27.0 8.8140 0.573 32.0646 4.50 26 196.0 28.0 8.8226 0.598 32.0758 4.50 27 196.0 29.0 8.8291 0.617 32.0794 4.52 26 196.9 30.0 8.8437 0.579 32.0937 4.52 24 196.9 31.0 8.8447 0.589 32.1008 4.52 26 196.9 32.0 8.8419 0.593 32.1018 4.50 28 196.0 33.0 8.8305 0.561 32.1063 4.49 27 195.6 34.0 8.8284 0.584 32.1075 4.48 24 195.1 35.0 8.8160 0.573 32.1079 4.44 25 193.4 36.0 8.8032 0.572 32.1077 4.41 24 192.1 37.0 8.7836 0.570 32.1074 4.37 29 190.4 38.0 8.7770 0.538 32.1074 4.34 29 189.0 39.0 8.7666 0.535 32.1076 4.32 23 188.2 40.0 8.7584 0.560 32.1086 4.29 24 186.9 41.0 8.7533 0.518 32.1091 4.26 27 185.6 42.0 8.7492 0.531 32.1097 4.22 31 183.8 43.0 8.7457 0.520 32.1106 4.19 28 182.5 44.0 8.7425 0.518 32.1131 4.18 22 182.1 45.0 8.7421 0.544 32.1170 4.17 23 181.6 46.0 8.7401 0.523 32.1193 4.16 27 181.2 47.0 8.7344 0.512 32.1223 4.13 30 179.9 48.0 8.7274 0.518 32.1353 4.09 25 178.2 49.0 8.7207 0.496 32.1527 4.07 24 177.3 50.0 8.7177 0.499 32.1588 4.05 28 176.4 51.0 8.7154 0.515 32.1631 4.04 28 176.0 52.0 8.7138 0.490 32.1662 4.01 27 174.7 53.0 8.7076 0.494 32.1780 3.97 27 172.9 54.0 8.7006 0.483 32.1914 3.94 27 171.6 55.0 8.6941 0.490 32.2040 3.90 24 169.9 56.0 8.6890 0.504 32.2128 3.89 24 169.4 57.0 8.6882 0.466 32.2147 3.89 27 169.4 58.0 8.6883 0.470 32.2149 3.87 30 168.6 59.0 8.6880 0.467 32.2157 3.88 26 169.0 60.0 8.6880 0.461 32.2159 3.88 23 169.0 61.0 8.6884 0.464 32.2155 3.87 25 168.6 62.0 8.6887 0.470 32.2154 3.87 27 168.6 63.0 8.6885 0.462 32.2157 3.86 29 168.1 64.0 8.6871 0.472 32.2183 3.86 25 168.1 65.0 8.6858 0.459 32.2203 3.86 24 168.1 66.0 8.6883 0.458 32.2168 3.86 26 168.1 67.0 8.6834 0.472 32.2246 3.83 27 166.8 68.0 8.6845 0.455 32.2229 3.76 25 163.8 69.0 8.6451 0.446 32.2885 3.67 28 159.8 70.2 8.5841 0.431 32.3916 3.62 20 157.6 70.5 8.5796 0.403 32.3975 3.60 2 156.8