*2009/03/03 17:21:01.81 *IOS HEADER VERSION 1.8 2007/05/25 2007/05/25 *FILE START TIME : UTC 2008/11/06 19:14:09.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 40 DATA DESCRIPTION : CTD FILE TYPE : ASCII CRC : A76A5FEA NUMBER OF CHANNELS : 7 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------- --------------- -------------- -------------- 1 Pressure decibar 3.1 41.5 2 Temperature:Primary 'deg C (ITS90)' 8.9939 9.1767 3 Fluorescence:URU:Seapoint mg/m^3 0.592 0.939 4 Salinity:T0:C0 PSS-78 31.8638 32.063 5 Oxygen:Dissolved:SBE mL/L 4.78 5.13 6 Number_of_bin_records n/a 5 39 7 Oxygen:Dissolved:SBE umol/kg 208.2254 223.5111 $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 7 F ' ' 1 2 -99 ' ' 9 F ' ' 4 3 -99 ' ' 8 F ' ' 3 4 -99 ' ' 9 F ' ' 4 5 -99 ' ' 7 F ' ' 2 6 ' ' ' ' 5 I I 0 7 -99 ' ' 6 F ' ' 1 $END $REMARKS This file converted from Sea-Bird file: Q:\Cruise_Data_Processing\2008-15\Pro Comments from secondary file: Q:\Cruise_Data_Processing\2008-15\Processing\align\2008-15-0359.delo -------------------------------------------------------------------- This file converted from Sea-Bird file: Q:\Cruise_Data_Processing\2008-15\Pro $END *ADMINISTRATION MISSION : 2008-15 AGENCY : PBS, Ocean Science and Productivity, Nanaimo, B.C. COUNTRY : Canada PROJECT : High Seas Salmon SCIENTIST : Trudel M. PLATFORM : W.E. Ricker *LOCATION GEOGRAPHIC AREA : SoG/JdeF/WCVI/North Coast STATION : JF04 EVENT NUMBER : 359 LATITUDE : 48 23.24000 N ! (deg min) LONGITUDE : 124 1.58000 W ! (deg min) WATER DEPTH : 46 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0506 $TABLE: SENSORS ! Name Abs Depth Serial No ! ------------------------- -------------- ---------- temperature:primary ' ' 4752 conductivity:primary ' ' 2173 pressure ' ' 0506 temperature:secondary ' ' 2968 conductivity:secondary ' ' 3038 Fluorometer ' ' Seapoint transmissometer:primary ' ' 953DR Oxygen:SBE ' ' 0047 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.16A Comments from secondary file: Q:\Cruise_Data_Processing\2008-15\Processing\align\2008-15-0359.delo -------------------------------------------------------------------- SOFTWARE VERSION SEASAVE V 7.16A $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! -------- ------ ---------- -------- --------- --------- SBE_IOS 3.1 2009/01/30 17:12:00 5592 5592 CLEAN 5.0.2 2009/01/30 18:21:52 ? ? MERGEHDR 1.1 2009/01/31 15:20:04 5558 5558 SHIFTDAT 3.4 2009/01/31 17:51:42 5558 5558 SHIFTDAT 3.4 2009/02/02 12:21:01 5558 5558 DELETE 6.3 2009/02/02 12:55:26 5558 1113 CTDEDIT 4.61 2009/02/06 15:39:18 1113 1079 REMOVECH 8.0 2009/02/07 13:58:16 1079 1079 MERGE 3.3 2009/02/07 14:09:28 1079 1079 CALIB 11.7 2009/02/07 15:51:11 1079 1079 FILTERS 4.3 2009/02/07 16:01:00 1079 1079 BINAVE 4.1.1 2009/02/07 16:05:23 1079 40 REMOVECH 8.0 2009/02/07 16:20:44 40 40 HDREDIT2 2.5.1 2009/02/07 16:40:23 ? ? CHGUNITS 3.0 2009/03/03 17:21:01 40 40 $END $REMARKS -CLEAN functions: 2009/01/30 18:02:49 20 Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:Seapoint # of Records to Advance (-ve for Delay): At REC# 0 Shift= 24.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 31.84 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CTDEDIT 2009/02/06 15:39:18 34 records were deleted in this editing session. 134 changes in channel Salinity:T0:C0 -REMOVECH 2009/02/07 13:58:16 2 channels removed. -The following MERGE parameters were used: 2009/02/07 14:08:28 2009/02/07 14:08:39 2009/02/07 14:08: Merge Channel: Scan_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Oxygen:Voltage:SBE, Oxygen:Dissolved:SBE Primary file : Q:\Cruise_Data_Processing\2008-15\Processing\align\2008-15-0359.remo Secondary file: Q:\Cruise_Data_Processing\2008-15\Processing\align\2008-15-0359.delo Comments from secondary file: Q:\Cruise_Data_Processing\2008-15\Processing\align\2008-15-0359.delo -------------------------------------------------------------------- -CLEAN functions: 2009/01/30 18:02:49 20 Set event to last 4 characters of file name -The following SHIFT parameters were used. Shift Channel: Fluorescence:Seapoint # of Records to Advance (-ve for Delay): At REC# 0 Shift= 24.00 -The following SHIFT parameters were used. Shift Channel: Conductivity:Primary # of Records to Advance (-ve for Delay): At REC# 0 Shift= -0.50 Salinity was recalculated after shift -The following SHIFT parameters were used. Shift Channel: Oxygen:Dissolved:SBE # of Records to Advance (-ve for Delay): At REC# 0 Shift= 60.00 -The following DELETE parameters were used: Surface Record Removal: Last Press Min Maximum Surface Pressure (relative): 10.00 Surface Swell Pressure Tolerance: 1.00 Pressure filtered over width: 15 Swells deleted. Warning message if pressure difference of 2.00 Drop rates < 0.30m/s (calculated over 11 points) will be deleted. Drop rate applies in the range 10.00 to 31.84 dbars Sample interval (from FILE section of header) = 0.042 seconds. -CALIB parameters: 2009/02/07 15:51:11 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = Q:\Cruise_Data_Processing\2008-15\Processing\doc\2008-15-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 15 Oxygen:Dissolved:SBE mL/L 10 -0.1940000E-01 0.1063300E+01 -The following FILTER parameters were used. Median filter was used. Filter width = 11 The following channel(s) were filtered. Fluorescence:Seapoint -The following BINAVE parameters were used: Bin channel = Pressure Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -REMOVECH 2009/02/07 16:20:44 10 channels removed. -HEADER EDITS: 2009/02/07 16:40:23 Applied edit header: Q:\Cruise_Data_Processing\2008-15\Processing\doc\2008-15-hdr-leg2.txt Channel 1: Pressure [decibar] Units: dbars ==> decibar Format: F10.3 ==> F7.1 Channel 3: Fluorescence:URU:Seapoint [mg/m^3] Name: Fluorescence:Seapoint ==> Fluorescence:URU:Seapoint Channel 5: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 -CHANGE units: 'Oxygen:Dissolved:SBE' changed from mL/L to umol/kg $END *COMMENTS SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\DATA\2008\2008-15\2008-15-359.hex Software Version Seasave V 7.16a Temperature SN = 4752 Conductivity SN = 2173 Number of Bytes Per Scan = 31 Number of Voltage Words = 2 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Nov 06 2008 19:12:14 NMEA Latitude = 48 23.24 N NMEA Longitude = 124 01.58 W NMEA UTC (Time) = Nov 06 2008 19:14:09 Store Lat/Lon Data = Append to Every Scan Ship: Ricker Station: jf04 Operator: Hugh # nquan = 15 # nvalues = 5592 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = xmiss: Beam Transmission, Chelsea/Seatech/Wetlab CStar [%] # name 7 = flSP: Fluorescence, Seapoint # name 8 = sbeox0V: Oxygen Voltage, SBE 43 # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity [PSU] # name 12 = sal11: Salinity, 2 [PSU] # name 13 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 14 = flag: flag # span 0 = 1, 5592 # span 1 = 1.776, 41.836 # span 2 = 8.9888, 9.1781 # span 3 = 8.9898, 9.1788 # span 4 = 3.397848, 3.447979 # span 5 = 99.000000, 99.000000 # span 6 = -0.8833, -0.1551 # span 7 = 5.1282e-01, 7.1868e+00 # span 8 = 1.9939, 2.6496 # span 9 = -0.971, 0.958 # span 10 = 0, 1 # span 11 = 31.5454, 32.0703 # span 12 = 2000.0000, 2000.0000 # span 13 = 3.35604, 5.09118 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Nov 06 2008 19:12:14 # bad_flag = -9.990e-29 # sensor 0 = Frequency 0 temperature, primary, 4752, 06-Mar-07 # sensor 1 = Frequency 1 conductivity, primary, 2173, 07 May 08, cpcor = -9.57 00e-08 # sensor 2 = Frequency 2 pressure, 0506, 26-May-06 # sensor 3 = Frequency 3 temperature, secondary, 2968, 22-Aug-07 # sensor 4 = Frequency 4 conductivity, secondary, 3038, 11-Oct-07, cpcor = -9. 5700e-08 # sensor 5 = Extrnl Volt 0 Fluorometer, Seapoint, primary # sensor 6 = Extrnl Volt 2 transmissometer, primary, 953DR, 22-Apr-07 # sensor 7 = Extrnl Volt 3 Oxygen, SBE, primary, 0047, 01-Jun-07 # datcnv_date = Jan 30 2009 09:29:36, 7.18 # datcnv_in = Q:\Cruise_Data_Processing\2008-15\RAW\CTD\2008-15-0359.hex Q:\Crui se_Data_Processing\2008-15\Processing\doc\2008-15-ctd2.CON # datcnv_skipover = 0 # wildedit_date = Jan 30 2009 10:03:42, 7.18 # wildedit_in = Q:\Cruise_Data_Processing\2008-15\Processing\convert\2008-15-035 9.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # celltm_date = Jan 30 2009 15:04:22, 7.18 # celltm_in = Q:\Cruise_Data_Processing\2008-15\Processing\wildedit\2008-15-0359 .cnv # celltm_alpha = 0.0300, 0.0000 # celltm_tau = 9.0000, 0.0000 # celltm_temp_sensor_use_for_cond = primary, # Derive_date = Jan 30 2009 15:17:21, 7.18 # Derive_in = Q:\Cruise_Data_Processing\2008-15\Processing\celltm\2008-15-0359.c nv Q:\Cruise_Data_Processing\2008-15\Processing\doc\2008-15-ctd1.CON # derive_time_window_docdt = seconds: 2 # file_type = ascii END* CTDEDIT was used to remove surface records; salinity was cleaned. Comments from secondary file: Q:\Cruise_Data_Processing\2008-15\Processing\align\2008-15-0359.delo -------------------------------------------------------------------- SBE HEADER Sea-Bird SBE 9 Data File: FileName = C:\DATA\2008\2008-15\2008-15-359.hex Software Version Seasave V 7.16a Temperature SN = 4752 Conductivity SN = 2173 Number of Bytes Per Scan = 31 Number of Voltage Words = 2 Number of Scans Averaged by the Deck Unit = 1 System UpLoad Time = Nov 06 2008 19:12:14 NMEA Latitude = 48 23.24 N NMEA Longitude = 124 01.58 W NMEA UTC (Time) = Nov 06 2008 19:14:09 Store Lat/Lon Data = Append to Every Scan Ship: Ricker Station: jf04 Operator: Hugh # nquan = 15 # nvalues = 5592 # units = specified # name 0 = scan: Scan Count # name 1 = prDM: Pressure, Digiquartz [db] # name 2 = t090C: Temperature [ITS-90, deg C] # name 3 = t190C: Temperature, 2 [ITS-90, deg C] # name 4 = c0S/m: Conductivity [S/m] # name 5 = c1S/m: Conductivity, 2 [S/m] # name 6 = xmiss: Beam Transmission, Chelsea/Seatech/Wetlab CStar [%] # name 7 = flSP: Fluorescence, Seapoint # name 8 = sbeox0V: Oxygen Voltage, SBE 43 # name 9 = dz/dtM: Descent Rate [m/s] # name 10 = pumps: Pump Status # name 11 = sal00: Salinity [PSU] # name 12 = sal11: Salinity, 2 [PSU] # name 13 = sbeox0ML/L: Oxygen, SBE 43 [ml/l], WS = 2 # name 14 = flag: flag # span 0 = 1, 5592 # span 1 = 1.776, 41.836 # span 2 = 8.9888, 9.1781 # span 3 = 8.9898, 9.1788 # span 4 = 3.397848, 3.447979 # span 5 = 99.000000, 99.000000 # span 6 = -0.8833, -0.1551 # span 7 = 5.1282e-01, 7.1868e+00 # span 8 = 1.9939, 2.6496 # span 9 = -0.971, 0.958 # span 10 = 0, 1 # span 11 = 31.5454, 32.0703 # span 12 = 2000.0000, 2000.0000 # span 13 = 3.35604, 5.09118 # span 14 = 0.0000e+00, 0.0000e+00 # interval = seconds: 0.0416667 # start_time = Nov 06 2008 19:12:14 # bad_flag = -9.990e-29 # sensor 0 = Frequency 0 temperature, primary, 4752, 06-Mar-07 # sensor 1 = Frequency 1 conductivity, primary, 2173, 07 May 08, cpcor = -9.57 00e-08 # sensor 2 = Frequency 2 pressure, 0506, 26-May-06 # sensor 3 = Frequency 3 temperature, secondary, 2968, 22-Aug-07 # sensor 4 = Frequency 4 conductivity, secondary, 3038, 11-Oct-07, cpcor = -9. 5700e-08 # sensor 5 = Extrnl Volt 0 Fluorometer, Seapoint, primary # sensor 6 = Extrnl Volt 2 transmissometer, primary, 953DR, 22-Apr-07 # sensor 7 = Extrnl Volt 3 Oxygen, SBE, primary, 0047, 01-Jun-07 # datcnv_date = Jan 30 2009 09:29:36, 7.18 # datcnv_in = Q:\Cruise_Data_Processing\2008-15\RAW\CTD\2008-15-0359.hex Q:\Crui se_Data_Processing\2008-15\Processing\doc\2008-15-ctd2.CON # datcnv_skipover = 0 # wildedit_date = Jan 30 2009 10:03:42, 7.18 # wildedit_in = Q:\Cruise_Data_Processing\2008-15\Processing\convert\2008-15-035 9.cnv # wildedit_pass1_nstd = 2.0 # wildedit_pass2_nstd = 5.0 # wildedit_pass2_mindelta = 0.000e+000 # wildedit_npoint = 50 # wildedit_vars = prDM t090C t190C c0S/m c1S/m # wildedit_excl_bad_scans = yes # celltm_date = Jan 30 2009 15:04:22, 7.18 # celltm_in = Q:\Cruise_Data_Processing\2008-15\Processing\wildedit\2008-15-0359 .cnv # celltm_alpha = 0.0300, 0.0000 # celltm_tau = 9.0000, 0.0000 # celltm_temp_sensor_use_for_cond = primary, # Derive_date = Jan 30 2009 15:17:21, 7.18 # Derive_in = Q:\Cruise_Data_Processing\2008-15\Processing\celltm\2008-15-0359.c nv Q:\Cruise_Data_Processing\2008-15\Processing\doc\2008-15-ctd1.CON # derive_time_window_docdt = seconds: 2 # file_type = ascii END* ******************************************************************* The fluorescence data are nominal and unedited except that some records were removed in editing T and S. The transmissometer malfunctioned so no useful data are available. There were no DO bottle samples available so the Dissolved Oxygen data were recalibrated using the results of another cruise that used the same sensor. ******************************************************************* *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------ ---- ------ ------------ Oxygen:Dissolved:SBE mL/L 10 -99 () (-0.194E-01 1.0633) $END !--1--- ---2---- ---3--- ---4---- --5--- -6-- --7-- !Pressu Temperat Fluores Salinity Oxygen Numb Oxyge !re ure: cence: :T0:C0 : er_o n: ! Primary URU: Dissol ~bin Disso ! Seapoin ved: _rec lved: ! t SBE ords SBE !------ -------- ------- -------- ------ ---- ----- *END OF HEADER 3.1 9.1684 0.939 31.8638 5.13 27 223.5 4.0 9.1677 0.919 31.8812 5.13 39 223.5 5.0 9.1649 0.876 31.9058 5.10 34 222.2 6.0 9.1638 0.939 31.9357 5.08 36 221.3 7.0 9.1646 0.907 31.9575 5.05 34 220.0 7.9 9.1652 0.858 31.9676 5.01 28 218.3 9.0 9.1667 0.792 31.9987 4.97 29 216.5 10.0 9.1677 0.732 32.0274 4.95 29 215.6 11.0 9.1683 0.751 32.0325 4.97 24 216.5 12.0 9.1689 0.729 32.0346 4.99 28 217.4 13.0 9.1694 0.703 32.0350 4.99 27 217.4 14.0 9.1708 0.713 32.0359 4.98 27 216.9 15.0 9.1747 0.730 32.0379 4.97 28 216.5 16.0 9.1742 0.703 32.0376 4.99 25 217.4 17.0 9.1767 0.707 32.0467 4.98 27 216.9 18.0 9.1723 0.727 32.0507 4.93 26 214.8 19.0 9.1260 0.699 32.0588 4.91 26 213.9 20.0 9.1223 0.664 32.0594 4.89 27 213.0 21.0 9.0862 0.658 32.0629 4.87 26 212.1 22.0 9.0913 0.702 32.0621 4.87 26 212.1 23.0 9.0810 0.635 32.0625 4.87 26 212.1 24.0 9.0807 0.631 32.0623 4.87 25 212.1 25.0 9.0720 0.681 32.0627 4.86 26 211.7 26.0 9.0757 0.643 32.0627 4.85 25 211.3 27.0 9.0593 0.650 32.0622 4.83 26 210.4 28.0 9.0502 0.666 32.0623 4.82 25 210.0 29.0 9.0398 0.674 32.0619 4.82 26 210.0 30.0 9.0480 0.621 32.0623 4.83 27 210.4 31.0 9.0706 0.638 32.0626 4.85 27 211.3 32.0 9.0747 0.634 32.0630 4.86 27 211.7 33.0 9.0938 0.653 32.0629 4.87 25 212.1 34.0 9.0891 0.675 32.0630 4.87 26 212.1 35.0 9.0790 0.679 32.0630 4.85 27 211.3 36.0 9.0453 0.651 32.0616 4.82 27 210.0 37.0 9.0195 0.614 32.0614 4.80 26 209.1 38.0 9.0219 0.650 32.0614 4.80 25 209.1 39.1 9.0232 0.654 32.0622 4.79 21 208.7 40.0 9.0208 0.592 32.0627 4.79 33 208.7 41.0 9.0142 0.611 32.0618 4.79 31 208.7 41.5 8.9939 0.598 32.0584 4.78 5 208.2