*2014/11/20 09:56:12.56 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2008/09/07 00:11:42.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 12 DATA DESCRIPTION : Bottle:Rosette:Up:Stop + CTD:Up FILE TYPE : ASCII CRC : 165284FB NUMBER OF CHANNELS : 25 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- ---------------------------- --------------- -------------- -------------- 1 Sample_Number n/a 315 326 2 Pressure decibar 5.04 186.86 3 Temperature:Primary 'deg C (ITS90)' 6.3796 11.5052 4 Transmissivity %/metre 26.9 51.2 5 Fluorescence:URU:Seapoint mg/m^3 0.101 2.475 6 PAR uE/m^2/sec 0.52 92.733 7 Salinity:T0:C0 PSS-78 29.5899 33.8729 8 Oxygen:Dissolved:SBE mL/L 2.043 6.083 9 Oxygen:Dissolved:SBE umol/kg 88.84114 265.4104 10 Bottle_Number n/a 1 12 11 Number_of_bin_records n/a 197 241 12 Salinity:Bottle PSS-78 29.5919 33.8718 13 Flag:Salinity:Bottle n/a 14 Chlorophyll:Extracted mg/m^3 0.44 3.93 15 Flag:Chlorophyll:Extracted n/a 16 Oxygen:Dissolved mL/L 2.001 6.076 17 Flag:Oxygen:Dissolved n/a 18 Nitrate_plus_Nitrite umol/L 11.5 37 19 Flag:Nitrate_plus_Nitrite n/a 20 Silicate umol/L 23.9 59.6 21 Flag:Silicate n/a 22 Phosphate umol/L 1.19 2.55 23 Flag:Phosphate n/a 24 Ammonium umol/L 0.69 1.49 25 Flag:Ammonium n/a $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 5 I I 0 2 -99 ' ' 7 F ' ' 1 3 -99 ' ' 9 F ' ' 4 4 -99 ' ' 6 F ' ' 1 5 -99 ' ' 8 F ' ' 3 6 -99 ' ' 7 F ' ' 1 7 -99 ' ' 9 F ' ' 4 8 -99 ' ' 7 F ' ' 2 9 -99 ' ' 6 F ' ' 1 10 -99 ' ' 3 I I 0 11 ' ' ' ' 5 I I 0 12 -99 ' ' 9 F R4 4 13 0 ' ' 3 NQ C ' ' 14 -99 ' ' 7 F R4 2 15 0 ' ' 3 NQ C ' ' 16 -99 ' ' 8 F ' ' 3 17 0 ' ' 3 NQ C ' ' 18 -99 ' ' 6 F R4 1 19 0 ' ' 3 NQ C ' ' 20 -99 ' ' 6 F R4 1 21 0 ' ' 3 NQ C ' ' 22 -99 ' ' 7 F R4 2 23 0 ' ' 3 NQ C ' ' 24 -99 ' ' 7 F R4 2 25 0 ' ' 3 NQ C ' ' $END $REMARKS Flag channels initialized with zeros. Non-zero values have the following significance: -------------------------------------------------------------------------------------- 1 = Sample for this measurement was drawn from water bottle but not analyzed (not normally used). 2 = Acceptable measurement (not normally used). 3 = Questionable measurement (no problem observed in sampling or analysis, but value is not trusted, nonetheless; includes outlyers). 4 = Bad measurement (known problem with sampling or analysis, but not serious enough to completely discard the value). 5 = Not reported (lost sample; unredeemably bad measurement). 6 = Mean of replicate measurements. 7 = Manual chromatographic peak measurement. 8 = Irregular digital chromatographic peak integration. 9 = Sample not drawn for this measurement from this bottle (not normally used). -------------------------------------------------------------------------------------- $END *ADMINISTRATION MISSION : 2008-10 AGENCY : IOS, Ocean Sciences Division, Sidney, B.C. COUNTRY : Canada PROJECT : LaPerouse SCIENTIST : Yelland D. PLATFORM : John P. Tully *LOCATION GEOGRAPHIC AREA : WCVI STATION : CS09 EVENT NUMBER : 105 LATITUDE : 51 12.45000 N ! (deg min) LONGITUDE : 128 27.93000 W ! (deg min) WATER DEPTH : 196 ALTIMETER (M) : 9.55 ! custom item $REMARKS Altimeter value is distance from bottom and is calculated as the median of the deepest 2 metres of data. $END *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0443 $TABLE: SENSORS ! Name Abs Depth Serial No ! ------------------------- -------------- ---------- temperature:primary ' ' 4054 conductivity:primary ' ' 1766 pressure ' ' 63507 temperature:secondary ' ' 4700 conductivity:secondary ' ' 2173 Fluorometer ' ' Seapoint transmissometer:primary ' ' 1005DR Oxygen:SBE ' ' 1176 altimeter: ' ' ' ' irradiance:primary ' ' 4656 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.16 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------ ------ ---------- -------- --------- --------- SBE_IOS 3.1 2009/02/10 15:02:42 2847 2847 CLEAN 5.0.2 2009/02/10 15:11:32 2847 2847 ADDSAMP 3.4 2009/02/10 15:36:11 2847 2847 BINAVE 4.1.1 2009/02/10 15:37:15 2847 12 MERGE 3.3 2009/02/10 15:52:08 12 12 CLEAN 5.0.2 2009/02/11 16:57:38 ? ? CALIB 11.7 2009/02/16 11:16:04 12 12 SORT 3.5 2009/02/20 17:10:26 12 12 REMOVECH 8.0 2009/02/20 17:10:51 12 12 CHGUNITS 3.0 2009/02/20 17:14:21 12 12 REORDER 1.2.1 2009/02/20 17:15:41 ? ? HDREDIT2 2.5.1 2009/02/20 17:26:36 ? ? CHANGE_FLAGS 1.0 2013/07/16 11:49:09 12 12 CHANGE_FLAGS 2.0 2014/11/20 09:56:12 12 12 $END $REMARKS -CLEAN functions: 2009/02/10 15:11:06 20 Reset #RECS, MIN & MAX values in header. Set event to last 4 characters of file name -The following ADDSAMP parameters were used: Sample Number Lookup File: Q:\Cruise_Data_Processing\2008-10\Processing\hydro\addsamp.csv Bottle Channel Name: Bottle_Number -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -The following MERGE parameters were used: 2009/02/10 15:52:00 2009/02/10 15:52:00 2009/02/10 15:52: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Salinity:Bottle, Flag:Salinity:Bottle, Chlorophyll:Extracted, Flag:Chlorophyll:Extracted, Oxygen:Dissolved, Flag:Oxygen:Dissolved, Nitrate_plus_Nitrite, Flag:Nitrate_plus_Nitrite, Silicate, Flag:Silicate, Phosphate, Flag:Phosphate, Ammonium, Flag:Ammonium Primary file : Q:\Cruise_Data_Processing\2008-10\Processing\hydro\2008-10-0105.samavg Secondary file: Q:\Cruise_Data_Processing\2008-10\Processing\hydro\2008-10-0105.mrgcln1 -CLEAN functions: 2009/02/11 16:57:33 20 Remove Sea-Bird comments from the header. Remove remark heading: "Comments from secondary" -CALIB parameters: 2009/02/16 11:16:04 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = Q:\Cruise_Data_Processing\2008-10\Processing\doc\2008-10-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 3 Pressure dbars 10 0.2000000E+00 0.1000000E+01 17 Oxygen:Dissolved:SBE mL/L 10 0.9500000E-02 0.1072700E+01 -SORT parameters: 2009/02/20 17:10:26 Sorted in ascending order of channel Press* -REMOVECH 2009/02/20 17:10:51 10 channels removed. -CHANGE units: 'Oxygen:Dissolved:SBE' changed from mL/L to umol/kg -HEADER EDITS: 2009/02/20 17:26:36 Applied edit header: Q:\Cruise_Data_Processing\2008-10\Processing\doc\2008-10-bot-hdr.txt Channel 2: Pressure [decibar] Units: dbars ==> decibar Format: F11.2 ==> F7.1 Channel 5: Fluorescence:URU:Seapoint [mg/m^3] Name: Fluorescence:Seapoint ==> Fluorescence:URU:Seapoint Channel 6: PAR [uE/m^2/sec] Format: F11.3 ==> F7.1 Channel 8: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 12: Salinity:Bottle [PSS-78] Units: ==> PSS-78 Channel 13: Flag:Salinity:Bottle [n/a] Units: ==> n/a Channel 14: Chlorophyll:Extracted [mg/m^3] Units: ==> mg/m^3 Channel 15: Flag:Chlorophyll:Extracted [n/a] Units: ==> n/a Channel 17: Flag:Oxygen:Dissolved [n/a] Units: ==> n/a Channel 19: Flag:Nitrate_plus_Nitrite [n/a] Units: ==> n/a Channel 21: Flag:Silicate [n/a] Units: ==> n/a Channel 23: Flag:Phosphate [n/a] Units: ==> n/a Channel 24: Ammonium [umol/L] Units: ==> umol/L Channel 25: Flag:Ammonium [n/a] Units: ==> n/a $END *COMMENTS Analysis methods: ----------------- Chlorophyll samples were analyzed at sea using a Chemistry Turner 10 AU fluorometer which was calibrated on April 23, 2008 using pure chlorophyll a. Chlorophyll precision was determined by analyzing replicate samples drawn from one Niskin. For details see worksheet “Precision” in file QF2008-10CHL.xls. Oxygen samples were analyzed on an automated Winkler titration system following the procedures of Carpenter (1965). Samples were analyzed at sea using an automated titration system consisting of a Brinkman Dosimat (model 665) and a PC 900 Colorimeter. For details on precision see file 2008-10-oxy-duplicates.xls. Salinity samples were collected in glass bottles and analyzed on a Guildline model 8400B Autosal at IOS or a Guildline Portasal 8410A at sea. Salinometers are standardized with IAPSO standard seawater. See file 2008-10-sal-duplicates.xls for information on precision. Nutrient samples were analyzed at sea using an Astoria-Pacific analyzer following methods described in Barwell-Clarke and Whitney (1996). For details on nutrient duplicates and precision see file QF2008-10nuts M.xls. Ammonia samples were analyzed at sea using a TD700 fluorometer. For details on precision see document QF2008-10NH4.xls. References: 1. Carpenter, J.H. 1965. The Chesapeake Bay Institute Technique for the Winkler Dissolved Oxygen Method. Limmnol. & Oceanogr., 10: 141-143. 2. J. Barwell-Clarke and F. Whitney. 1996. Institute of Ocean Sciences Nutrient Methods and Analysis. Canadian Technical Report of Hydrography and Ocean Sciences, No. 182, 43 pp. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------- ---- ------ ------------ Pressure dbars 10 -99 () (0.2 1) Oxygen:Dissolved:SBE mL/L 10 -99 () (0.95E-02 1.0727) $END !-1-- --2--- ---3---- --4-- ---5--- --6--- ---7---- --8--- --9-- 10 -11- ---12--- 13 --14-- 15 ---16-- 17 --18- 19 --20- 21 --22-- 23 --24-- 25 !Samp Pressu Temperat Trans Fluores PAR Salinity Oxygen Oxyge Bo Numb Salinity Fl Chloro Fl Oxygen: Fl Nitra Fl Silic Fl Phosph Fl Ammoni Fl !le_ re ure: missi cence: :T0:C0 : n: tt er_o :Bottle ag phyll: ag Dissolv ag te_ ag ate ag ate ag um ag !Numb Primary vity URU: Dissol Disso ~u ~bin ~o Extrac ~a ed ~o plus_ ~t ~i ~p ~o !er Seapoin ved: lved: mb _rec tt ted ct lv Nitri ri ca ha ni ! t SBE SBE er ords le ed ed te te te te um !---- ------ -------- ----- ------- ------ -------- ------ ----- -- ---- -------- -- ------ -- ------- -- ----- -- ----- -- ------ -- ------ -- *END OF HEADER 326 5.0 11.5052 26.9 2.475 92.7 29.5899 6.02 262.9 12 241 29.5919 0 3.93 0 6.018 0 11.5 0 25.9 0 1.19 0 0.69 6 325 9.7 11.3366 41.2 1.689 26.3 30.4535 6.08 265.4 11 241 -99.0000 0 2.15 0 6.076 0 15.2 0 28.1 0 1.43 0 0.70 6 324 20.6 11.0369 50.2 0.350 7.0 31.5820 5.36 233.4 10 241 -99.0000 0 0.44 6 5.359 0 13.6 6 23.9 6 1.33 6 1.49 6 323 29.6 10.9804 50.6 0.311 3.2 31.7884 5.24 228.4 9 241 -99.0000 0 -99.00 0 5.252 6 13.7 0 24.3 0 1.35 0 -99.00 0 321 49.3 10.3728 51.0 0.246 0.8 32.1250 4.87 212.1 7 197 -99.0000 0 -99.00 0 -99.000 0 -99.0 0 -99.0 0 -99.00 0 -99.00 0 322 49.4 10.3736 51.0 0.244 0.8 32.1251 4.88 212.4 8 240 -99.0000 0 -99.00 0 4.867 0 16.5 0 27.9 0 1.52 0 -99.00 0 320 74.3 8.0676 51.2 0.131 0.6 32.5915 3.73 162.6 6 241 -99.0000 0 -99.00 0 3.736 0 25.5 0 39.3 0 2.01 0 -99.00 0 319 99.9 7.1125 49.9 0.111 0.5 33.0427 2.86 124.5 5 241 -99.0000 0 -99.00 0 2.899 0 31.1 0 49.9 0 2.32 0 -99.00 0 318 124.0 6.6056 48.8 0.107 0.5 33.4422 2.30 99.9 4 241 -99.0000 0 -99.00 0 2.303 0 34.7 0 58.0 0 2.50 0 -99.00 0 317 149.2 6.4043 48.6 0.105 0.5 33.7219 2.07 89.8 3 241 33.7324 0 -99.00 0 2.038 0 36.2 0 59.6 0 2.55 0 -99.00 0 316 175.4 6.3796 47.4 0.101 0.5 33.8703 2.04 88.8 2 241 33.8718 6 -99.00 0 2.001 0 36.7 0 58.5 0 2.54 0 -99.00 0 315 186.9 6.3832 46.5 0.102 0.5 33.8729 2.06 89.7 1 241 -99.0000 0 -99.00 0 2.122 0 37.0 0 58.6 0 2.55 0 -99.00 0