*2014/11/20 09:56:00.16 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2008/02/16 08:16:06.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 19 DATA DESCRIPTION : Bottle:Rosette:Up:Stop + CTD:Up FILE TYPE : ASCII CRC : 477F94FE NUMBER OF CHANNELS : 22 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- ---------------------------- --------------- -------------- -------------- 1 Sample_Number n/a 453 471 2 Pressure decibar 4.85 321.24 3 Temperature:Secondary 'deg C (ITS90)' 6.4586 7.6111 4 Transmissivity %/metre 46.6 51.5 5 Fluorescence:URU:Seapoint mg/m^3 0.127 0.605 6 Oxygen:Dissolved:SBE mL/L 2.109 6.829 7 Oxygen:Dissolved:SBE umol/kg 91.76737 298.0467 8 Salinity:T1:C1 PSS-78 29.1496 33.1679 9 Bottle_Number n/a 1 19 10 Number_of_bin_records n/a 53 121 11 Salinity:Bottle PSS-78 29.3478 33.1645 12 Flag:Salinity:Bottle n/a 13 Chlorophyll:Extracted mg/m^3 0.4E-01 0.43 14 Flag:Chlorophyll:Extracted n/a 15 Oxygen:Dissolved mL/L 2.102 6.831 16 Flag:Oxygen:Dissolved n/a 17 Nitrate_plus_Nitrite umol/L 19.3 30.1 18 Flag:Nitrate_plus_Nitrite n/a 19 Silicate umol/L 35.3 64.2 20 Flag:Silicate n/a 21 Phosphate umol/L 1.64 2.75 22 Flag:Phosphate n/a $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 5 I I 0 2 -99 ' ' 7 F ' ' 1 3 -99 ' ' 9 F ' ' 4 4 -99 ' ' 6 F ' ' 1 5 -99 ' ' 8 F ' ' 3 6 -99 ' ' 7 F ' ' 2 7 -99 ' ' 6 F ' ' 1 8 -99 ' ' 9 F ' ' 4 9 -99 ' ' 3 I I 0 10 ' ' ' ' 5 I I 0 11 -99 ' ' 9 F R4 4 12 0 ' ' 3 NQ C ' ' 13 -99 ' ' 7 F R4 2 14 0 ' ' 3 NQ C ' ' 15 -99 ' ' 8 F ' ' 3 16 0 ' ' 3 NQ C ' ' 17 -99 ' ' 6 F R4 1 18 0 ' ' 3 NQ C ' ' 19 -99 ' ' 6 F R4 1 20 0 ' ' 3 NQ C ' ' 21 -99 ' ' 7 F R4 2 22 0 ' ' 3 NQ C ' ' $END $REMARKS Flag channels initialized with zeros. Non-zero values have the following significance: -------------------------------------------------------------------------------------- 1 = Sample for this measurement was drawn from water bottle but not analyzed (not normally used). 2 = Acceptable measurement (not normally used). 3 = Questionable measurement (no problem observed in sampling or analysis, but value is not trusted, nonetheless; includes outlyers). 4 = Bad measurement (known problem with sampling or analysis, but not serious enough to completely discard the value). 5 = Not reported (lost sample; unredeemably bad measurement). 6 = Mean of replicate measurements. 7 = Manual chromatographic peak measurement. 8 = Irregular digital chromatographic peak integration. 9 = Sample not drawn for this measurement from this bottle (not normally used). -------------------------------------------------------------------------------------- $END *ADMINISTRATION MISSION : 2008-01 AGENCY : IOS, Ocean Science and Productivity, Sidney, B.C. COUNTRY : Canada PROJECT : Line P SCIENTIST : Robert M. PLATFORM : John P. Tully *LOCATION GEOGRAPHIC AREA : North-East Pacific STATION : RI 1 EVENT NUMBER : 61 LATITUDE : 51 26.38000 N ! (deg min) LONGITUDE : 127 38.13000 W ! (deg min) WATER DEPTH : 333 ALTIMETER (M) : 11.58 ! custom item $REMARKS Altimeter value is distance from bottom and is calculated as the median of the deepest 2 metres of data. $END *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0550 $TABLE: SENSORS ! Name Abs Depth Serial No ! ------------------------- -------------- ---------- temperature:primary ' ' 4752 conductivity:primary ' ' 3321 pressure ' ' 75636 temperature:secondary ' ' 2968 conductivity:secondary ' ' 3038 Fluorometer ' ' Seapoint transmissometer:primary ' ' 1005DR Oxygen:SBE ' ' 0047 altimeter: ' ' ' ' irradiance:primary ' ' 4565 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.12 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.0 2008/03/14 13:00:23 2143 2143 CLEAN 5.0.2 2008/03/14 13:01:24 ? ? ADDSAMP 3.4 2008/03/14 14:07:55 2143 2143 BINAVE 4.1.1 2008/03/14 14:09:03 2143 19 MERGE 3.3 2008/04/08 13:05:37 19 19 CLEAN 5.0.2 2008/04/08 13:06:41 ? ? CALIB 11.7 2008/04/08 13:07:46 19 19 SORT 3.5 2008/04/08 15:27:37 19 19 REMOVECH 8.0 2008/04/08 15:28:02 19 19 CHGUNITS 3.0 2008/04/08 15:28:39 19 19 REORDER 1.2.1 2008/04/08 15:28:52 ? ? HDREDIT2 2.5.1 2008/04/08 15:29:16 ? ? CHANGE_FLAGS 1.0 2013/07/16 11:48:58 19 19 CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:33:32 19 19 CHANGE_FLAGS 2.0 2014/11/20 09:56:00 19 19 $END $REMARKS -CLEAN functions: 2008/03/14 13:00:37 20 Set event to last 4 characters of file name -The following ADDSAMP parameters were used: Sample Number Lookup File: Q:\Cruise_Data_Processing\2008-01\Processing\hydro\addsamp.csv Bottle Channel Name: Bottle_Number -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -The following MERGE parameters were used: 2008/04/08 13:05:33 2008/04/08 13:05:33 2008/04/08 13:05: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Salinity:Bottle, Flag:Salinity:Bottle, Chlorophyll:Extracted, Flag:Chlorophyll:Extracted, Oxygen:Dissolved, Flag:Oxygen:Dissolved, Nitrate_plus_Nitrite, Flag:Nitrate_plus_Nitrite, Silicate, Flag:Silicate, Phosphate, Flag:Phosphate, Dimethyl_Sulphide, Flag:Dimethyl_Sulphide Primary file : Q:\Cruise_Data_Processing\2008-01\Processing\hydro\2008-01-0061.samavg Secondary file: Q:\Cruise_Data_Processing\2008-01\Processing\hydro\2008-01-0061.mrgcln1 -CLEAN functions: 2008/04/08 13:06:36 20 Remove Sea-Bird comments from the header. Remove remark heading: "Comments from secondary" -CALIB parameters: 2008/04/08 13:07:46 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = Q:\Cruise_Data_Processing\2008-01\Processing\doc\2008-01-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 3 Pressure dbars 10 0.5000000E+00 0.1000000E+01 11 Oxygen:Dissolved:SBE mL/L 10 -0.1940000E-01 0.1063300E+01 -SORT parameters: 2008/04/08 15:27:37 Sorted in ascending order of channel Press* -REMOVECH 2008/04/08 15:28:02 11 channels removed. -CHANGE units: 'Oxygen:Dissolved:SBE' changed from mL/L to umol/kg -HEADER EDITS: 2008/04/08 15:29:16 Applied edit header: Q:\Cruise_Data_Processing\2008-01\Processing\doc\2008-01-bot-hdr.txt Channel 2: Pressure [decibar] Units: dbars ==> decibar Format: F11.2 ==> F7.1 Channel 5: Fluorescence:URU:Seapoint [mg/m^3] Name: Fluorescence:Seapoint ==> Fluorescence:URU:Seapoint Channel 6: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 11: Salinity:Bottle [PSS-78] Units: ==> PSS-78 $END *COMMENTS Dissolved Oxygen Sample #461: Average of values 5.038 and 5.030 Sample_Number 470: Nutrients: N rerun Samples #465-470: ALL PROPERTIES: There were no bottle salinity samples and other samples are unable to resolve whether there were any premature closings of Niskin bottles except for Niskin #14 (sample 466) for which all samples had values that are out of line in profiles. Analysis methods: ----------------- Chlorophyll samples were analyzed at sea using a Chemistry Turner Designs fluorometer which was calibrated in May 2007 using pure chlorophyll a. Chlorophyll precision was determined by analyzing replicate samples drawn from one Niskin. For details see worksheet “Precision” in file QF 2008-01CHL.xls. Oxygen samples are analyzed on an automated Winkler titration system following the procedures of Carpenter (1965). Samples were analyzed at sea using an automated titration system consisting of a Brinkman Dosimat (model 665) and a PC 900 Colorimeter. For details on precision see file 2008-01-DO-duplicates.xls. Salinity samples were collected in glass bottles and analyzed on a Guildline model 8400B Autosal or a Guildline Portasal 8410A. Salinometers are standardized with IAPSO standard seawater. See file 2008-01-duplicates-sal.xls for information on precision. Nutrient samples were collected in plastic tubes and analyzed fresh at sea using a Technicon AAII autoanalyzer following methods described in Barwell-Clarke and Whitney (1996). For details on nutrient duplicates and precision see file QF 2008-01nuts.xls. References: 1. Carpenter, J.H. 1965. The Chesapeake Bay Institute Technique for the Winkler Dissolved Oxygen Method. Limmnol. & Oceanogr., 10: 141-143. 2. J. Barwell-Clarke and F. Whitney. 1996. Institute of Ocean Sciences Nutrient Methods and Analysis. Canadian Technical Report of Hydrography and Ocean Sciences, No. 182, 43 pp. WARNING: All samples from Niskin Bottles #13 to #18 should be treated with care. While the CTD data corresponds to the level at which the bottle was fired, in many cases the bottle closed earlier. Notes in the headers of individual files indicate the probable level at which bottles closed, where evidence exists to make that estimate. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------- ---- ------ ------------ Pressure dbars 10 -99 () (0.5 1) Oxygen:Dissolved:SBE mL/L 10 -99 () (-0.194E-01 1.0633) $END !-1-- --2--- ---3---- --4-- ---5--- --6--- --7-- ---8---- 9- -10- ---11--- 12 --13-- 14 ---15-- 16 --17- 18 --19- 20 --21-- 22 !Samp Pressu Temperat Trans Fluores Oxygen Oxyge Salinity Bo Numb Salinity Fl Chloro Fl Oxygen: Fl Nitra Fl Silic Fl Phosph Fl !le_ re ure: missi cence: : n: :T1:C1 tt er_o :Bottle ag phyll: ag Dissolv ag te_ ag ate ag ate ag !Numb Secondar vity URU: Dissol Disso ~u ~bin ~o Extrac ~a ed ~o plus_ ~t ~i ~p !er y Seapoin ved: lved: mb _rec tt ted ct lv Nitri ri ca ha ! t SBE SBE er ords le ed ed te te te te !---- ------ -------- ----- ------- ------ ----- -------- -- ---- -------- -- ------ -- ------- -- ----- -- ----- -- ------ -- *END OF HEADER 471 4.8 6.4586 46.6 0.605 6.83 298.0 29.1496 19 121 29.3478 0 0.43 0 6.831 0 19.3 0 37.6 0 1.64 0 470 10.2 6.6836 48.8 0.453 6.65 290.1 30.4624 18 120 -99.0000 0 0.35 4 6.700 4 20.2 4 37.6 4 1.76 4 469 10.4 6.6802 48.7 0.456 6.65 290.1 30.4732 17 87 -99.0000 0 -99.00 0 -99.000 0 -99.0 0 -99.0 0 -99.00 0 468 24.9 6.6010 48.4 0.463 6.80 296.4 30.6749 16 121 -99.0000 0 0.36 46 6.830 4 20.6 46 38.1 46 1.79 46 467 25.1 6.6016 48.4 0.465 6.80 296.4 30.6745 15 121 -99.0000 0 -99.00 0 -99.000 0 -99.0 0 -99.0 0 -99.00 0 466 50.3 6.5690 49.6 0.350 6.71 292.6 31.0015 14 120 -99.0000 0 0.04 4 4.226 4 23.2 4 44.9 4 2.06 4 465 50.7 6.5734 49.5 0.344 6.72 292.8 31.0039 13 73 -99.0000 0 -99.00 0 -99.000 0 -99.0 0 -99.0 0 -99.00 0 464 74.8 7.4210 51.5 0.197 5.97 260.2 31.4842 12 121 -99.0000 0 0.09 0 5.935 0 20.0 0 35.5 0 1.75 0 462 99.8 7.6089 51.0 0.152 5.41 235.7 31.9915 10 53 -99.0000 0 -99.00 0 -99.000 0 -99.0 0 -99.0 0 -99.00 0 463 99.9 7.6111 50.9 0.154 5.41 235.8 31.9911 11 120 -99.0000 0 0.05 0 5.451 0 20.0 0 35.3 0 1.77 0 461 125.5 7.5356 49.7 0.145 4.99 217.2 32.2763 9 121 -99.0000 0 -99.00 0 5.034 6 20.5 0 37.3 0 1.83 0 459 149.7 7.4499 48.1 0.136 4.17 181.7 32.5701 7 119 -99.0000 0 -99.00 0 -99.000 0 -99.0 0 -99.0 0 -99.00 0 460 150.0 7.4498 48.2 0.136 4.17 181.7 32.5702 8 120 -99.0000 0 -99.00 0 4.213 0 23.2 0 44.6 0 2.05 0 458 175.8 7.2516 49.5 0.131 3.05 132.7 32.8953 6 121 -99.0000 0 -99.00 0 3.049 0 27.2 0 55.3 0 2.39 0 457 199.4 7.0285 49.4 0.130 2.42 105.1 33.0845 5 121 -99.0000 0 -99.00 0 2.437 0 29.4 0 61.5 0 2.59 0 456 250.4 6.9558 49.4 0.127 2.21 96.2 33.1461 4 121 33.1452 0 -99.00 0 2.191 0 30.0 0 63.7 0 2.66 0 455 250.5 6.9557 49.4 0.128 2.21 96.3 33.1461 3 121 -99.0000 0 -99.00 0 -99.000 0 -99.0 0 -99.0 0 -99.00 0 454 299.2 6.9479 49.3 0.127 2.14 93.0 33.1630 2 121 33.1645 0 -99.00 0 2.113 0 30.1 0 64.2 0 2.75 0 453 321.2 6.9457 48.7 0.129 2.11 91.8 33.1679 1 121 -99.0000 0 -99.00 0 2.102 0 30.0 0 64.1 0 2.74 0