*2014/11/20 09:55:59.91 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2008/02/13 19:40:30.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 24 DATA DESCRIPTION : Bottle:Rosette:Up:Stop + CTD:Up FILE TYPE : ASCII CRC : 390A2627 NUMBER OF CHANNELS : 18 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------------- --------------- -------------- -------------- 1 Sample_Number n/a 389 412 2 Pressure decibar 1499.3 1503.1 3 Temperature:Secondary 'deg C (ITS90)' 2.4014 2.4118 4 Transmissivity %/metre 61.4 61.5 5 Fluorescence:URU:Seapoint mg/m^3 0.11 0.114 6 Oxygen:Dissolved:SBE mL/L 0.66 0.67 7 Oxygen:Dissolved:SBE umol/kg 28.6 28.9 8 Salinity:T1:C1 PSS-78 34.4932 34.4951 9 Bottle_Number n/a 1 24 10 Number_of_bin_records n/a 116 121 11 Salinity:Bottle PSS-78 34.4924 34.4972 12 Flag:Salinity:Bottle n/a 13 Carbon:Dissolved:Inorganic umol/kg 2382.1 2386.4 14 Flag:Carbon:Dissolved:Inorganic n/a 15 Alkalinity:Total umol/kg 2394.4 2399.4 16 Flag:Alkalinity:Total n/a 17 pH n/a 7.334 7.334 18 Flag:pH n/a $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 5 I I 0 2 -99 ' ' 7 F ' ' 1 3 -99 ' ' 9 F ' ' 4 4 -99 ' ' 6 F ' ' 1 5 -99 ' ' 8 F ' ' 3 6 -99 ' ' 7 F ' ' 2 7 -99 ' ' 6 F ' ' 1 8 -99 ' ' 9 F ' ' 4 9 -99 ' ' 3 I I 0 10 ' ' ' ' 5 I I 0 11 -99 ' ' 9 F R4 4 12 0 ' ' 3 NQ C ' ' 13 -99 ' ' ' ' F8.2 R4 ' ' 14 0 ' ' 3 NQ C ' ' 15 -99 ' ' ' ' F8.2 R4 ' ' 16 0 ' ' 3 NQ C ' ' 17 -99 ' ' ' ' F9.4 R4 ' ' 18 0 ' ' 3 NQ C ' ' $END $REMARKS Flag channels initialized with zeros. Non-zero values have the following significance: -------------------------------------------------------------------------------------- 1 = Sample for this measurement was drawn from water bottle but not analyzed (not normally used). 2 = Acceptable measurement (not normally used). 3 = Questionable measurement (no problem observed in sampling or analysis, but value is not trusted, nonetheless; includes outlyers). 4 = Bad measurement (known problem with sampling or analysis, but not serious enough to completely discard the value). 5 = Not reported (lost sample; unredeemably bad measurement). 6 = Mean of replicate measurements. 7 = Manual chromatographic peak measurement. 8 = Irregular digital chromatographic peak integration. 9 = Sample not drawn for this measurement from this bottle (not normally used). -------------------------------------------------------------------------------------- $END *ADMINISTRATION MISSION : 2008-01 AGENCY : IOS, Ocean Science and Productivity, Sidney, B.C. COUNTRY : Canada PROJECT : Line P SCIENTIST : Robert M. PLATFORM : John P. Tully *LOCATION GEOGRAPHIC AREA : North-East Pacific STATION : CAL1 EVENT NUMBER : 55 LATITUDE : 53 21.82000 N ! (deg min) LONGITUDE : 135 29.45000 W ! (deg min) WATER DEPTH : 1763 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0550 $TABLE: SENSORS ! Name Abs Depth Serial No ! ------------------------- -------------- ---------- temperature:primary ' ' 4752 conductivity:primary ' ' 3321 pressure ' ' 75636 temperature:secondary ' ' 2968 conductivity:secondary ' ' 3038 Fluorometer ' ' Seapoint transmissometer:primary ' ' 1005DR Oxygen:SBE ' ' 0047 altimeter: ' ' ' ' irradiance:primary ' ' 4565 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.12 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.0 2008/03/14 13:00:17 2898 2898 CLEAN 5.0.2 2008/03/14 13:01:17 ? ? ADDSAMP 3.4 2008/03/14 14:07:48 2898 2898 BINAVE 4.1.1 2008/03/14 14:09:01 2898 24 MERGE 3.3 2008/04/08 13:05:36 24 24 CLEAN 5.0.2 2008/04/08 13:06:40 ? ? CALIB 11.7 2008/04/08 13:07:45 24 24 SORT 3.5 2008/04/08 15:27:36 24 24 REMOVECH 8.0 2008/04/08 15:28:02 24 24 CHGUNITS 3.0 2008/04/08 15:28:39 24 24 REORDER 1.2.1 2008/04/08 15:28:51 ? ? HDREDIT2 2.5.1 2008/04/08 15:29:15 ? ? SORT 3.5 2010/05/08 16:19:15 24 24 MERGE 3.3 2010/05/08 16:20:03 24 24 HDREDIT2 2.5.1 2010/05/08 16:28:00 ? ? SORT 3.5 2010/05/08 16:29:44 24 24 CHANGE_FLAGS 1.0 2013/07/29 14:30:46 24 24 CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:33:31 24 24 CHANGE_FLAGS 2.0 2014/11/20 09:55:59 24 24 $END $REMARKS -CLEAN functions: 2008/03/14 13:00:37 20 Set event to last 4 characters of file name -The following ADDSAMP parameters were used: Sample Number Lookup File: Q:\Cruise_Data_Processing\2008-01\Processing\hydro\addsamp.csv Bottle Channel Name: Bottle_Number -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -The following MERGE parameters were used: 2008/04/08 13:05:33 2008/04/08 13:05:33 2008/04/08 13:05: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Salinity:Bottle, Flag:Salinity:Bottle, Chlorophyll:Extracted, Flag:Chlorophyll:Extracted, Oxygen:Dissolved, Flag:Oxygen:Dissolved, Nitrate_plus_Nitrite, Flag:Nitrate_plus_Nitrite, Silicate, Flag:Silicate, Phosphate, Flag:Phosphate, Dimethyl_Sulphide, Flag:Dimethyl_Sulphide Primary file : Q:\Cruise_Data_Processing\2008-01\Processing\hydro\2008-01-0055.samavg Secondary file: Q:\Cruise_Data_Processing\2008-01\Processing\hydro\2008-01-0055.mrgcln1 -CLEAN functions: 2008/04/08 13:06:36 20 Remove Sea-Bird comments from the header. Remove remark heading: "Comments from secondary" -CALIB parameters: 2008/04/08 13:07:45 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = Q:\Cruise_Data_Processing\2008-01\Processing\doc\2008-01-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 3 Pressure dbars 10 0.5000000E+00 0.1000000E+01 11 Oxygen:Dissolved:SBE mL/L 10 -0.1940000E-01 0.1063300E+01 -SORT parameters: 2008/04/08 15:27:36 Sorted in ascending order of channel Press* -REMOVECH 2008/04/08 15:28:02 11 channels removed. -CHANGE units: 'Oxygen:Dissolved:SBE' changed from mL/L to umol/kg -HEADER EDITS: 2008/04/08 15:29:15 Applied edit header: Q:\Cruise_Data_Processing\2008-01\Processing\doc\2008-01-bot-hdr.txt Channel 2: Pressure [decibar] Units: dbars ==> decibar Format: F11.2 ==> F7.1 Channel 5: Fluorescence:URU:Seapoint [mg/m^3] Name: Fluorescence:Seapoint ==> Fluorescence:URU:Seapoint Channel 6: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 11: Salinity:Bottle [PSS-78] Units: ==> PSS-78 -SORT parameters: 2010/05/08 16:19:15 Sorted in ascending order of channel Sample_Number -The following MERGE parameters were used: 2010/05/08 16:20:02 2010/05/08 16:20:02 2010/05/08 16:20: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Average Primary Channels to Include: ALL Secondary Channels to Include: Carbon:Dissolved:Inorganic, Flag:Carbon:Dissolved:Inorganic, Alkalinity:Total, Flag:Alkalinity:Total, pH, Flag:pH Primary file : H:\Cruise_Data_Processing\Lisa Miller's Carbon Data\2008-01\2008-01-0055.chesrt Secondary file: H:\Cruise_Data_Processing\Lisa Miller's Carbon Data\2008-01\2008-01-0055.iossrt Comments from secondary file: H:\Cruise_Data_Processing\Lisa Miller's Carbon Data\2008-01\2008-01-0055.iossrt --------------------------------------------------------------------------- -SORT parameters: 2010/05/08 16:15:44 Sorted in ascending order of channel Sample_Number [ ] -HEADER EDITS: 2010/05/08 16:28:00 Applied edit header: H:\Cruise_Data_Processing\Lisa Miller's Carbon Data\DIC_ALK_pH.txt -SORT parameters: 2010/05/08 16:29:44 Sorted in ascending order of channel Pressure $END *COMMENTS Samples #401-406: ALL PROPERTIES: All bottles were fired at the same level. There is no evidence of premature firing. They might have closed out of order, but this would not affect the values of samples significantly. Analysis methods: ----------------- Chlorophyll samples were analyzed at sea using a Chemistry Turner Designs fluorometer which was calibrated in May 2007 using pure chlorophyll a. Chlorophyll precision was determined by analyzing replicate samples drawn from one Niskin. For details see worksheet “Precision” in file QF 2008-01CHL.xls. Oxygen samples are analyzed on an automated Winkler titration system following the procedures of Carpenter (1965). Samples were analyzed at sea using an automated titration system consisting of a Brinkman Dosimat (model 665) and a PC 900 Colorimeter. For details on precision see file 2008-01-DO-duplicates.xls. Salinity samples were collected in glass bottles and analyzed on a Guildline model 8400B Autosal or a Guildline Portasal 8410A. Salinometers are standardized with IAPSO standard seawater. See file 2008-01-duplicates-sal.xls for information on precision. Nutrient samples were collected in plastic tubes and analyzed fresh at sea using a Technicon AAII autoanalyzer following methods described in Barwell-Clarke and Whitney (1996). For details on nutrient duplicates and precision see file QF 2008-01nuts.xls. Dissolved inorganic carbon (DIC) was determined using coulometric analysis. Total alkalinity (Alk) was determined by potentiometric titration. pH on the total hydrogren ion concentration scale was determined photometrically and is reported at 25C and surface pressure. Complete documentation on DIC, ALK and pH sampling, analysis and precision estimates can be found in the Carbon Excel file from the cruise located in the cruise "DOC" directory. . References: 1. Carpenter, J.H. 1965. The Chesapeake Bay Institute Technique for the Winkler Dissolved Oxygen Method. Limmnol. & Oceanogr., 10: 141-143. 2. J. Barwell-Clarke and F. Whitney. 1996. Institute of Ocean Sciences Nutrient Methods and Analysis. Canadian Technical Report of Hydrography and Ocean Sciences, No. 182, 43 pp. WARNING: All samples from Niskin Bottles #13 to #18 should be treated with care. While the CTD data corresponds to the level at which the bottle was fired, in many cases the bottle closed earlier. Notes in the headers of individual files indicate the probable level at which bottles closed, where evidence exists to make that estimate. Comments from secondary file: H:\Cruise_Data_Processing\Lisa Miller's Carbon Data\2008-01\2008-01-0055.iossrt --------------------------------------------------------------------------- Sample_Number 389: TIC: Differs from replicate niskins *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------- ---- ------ ------------ Pressure dbars 10 -99 () (0.5 1) Oxygen:Dissolved:SBE mL/L 10 -99 () (-0.194E-01 1.0633) $END !-1-- --2--- ---3---- --4-- ---5--- --6--- --7-- ---8---- 9- -10- ---11--- 12 ---13-- 14 ---15-- 16 ---17--- 18 !Samp Pressu Temperat Trans Fluores Oxygen Oxyge Salinity Bo Numb Salinity Fl Carbon: Fl Alkalin Fl pH Fl !le_ re ure: missi cence: : n: :T1:C1 tt er_o :Bottle ag Dissolv ag ity: ag ag !Numb Secondar vity URU: Dissol Disso ~u ~bin ~o ed: ~g Total ~T : !er y Seapoin ved: lved: mb _rec tt Inorgan an ot pH ! t SBE SBE er ords le ic ic al !---- ------ -------- ----- ------- ------ ----- -------- -- ---- -------- -- ------- -- ------- -- -------- -- *END OF HEADER 390 1499.3 2.4117 61.5 0.111 0.66 28.8 34.4932 2 121 34.4956 0 2386.40 6 2397.90 6 -99.0000 0 409 1499.5 2.4043 61.5 0.112 0.66 28.8 34.4946 21 121 34.4965 0 -99.00 0 -99.00 0 -99.0000 0 407 1499.7 2.4081 61.4 0.112 0.66 28.7 34.4939 19 121 34.4942 0 -99.00 0 -99.00 0 -99.0000 0 397 1499.8 2.4048 61.4 0.112 0.67 28.9 34.4944 9 121 34.4971 0 -99.00 0 -99.00 0 -99.0000 0 392 1500.3 2.4090 61.5 0.114 0.66 28.8 34.4938 4 116 34.4944 0 2384.80 6 2396.70 6 -99.0000 0 411 1500.4 2.4033 61.4 0.112 0.66 28.8 34.4949 23 121 34.4941 0 -99.00 0 -99.00 0 -99.0000 0 393 1500.5 2.4078 61.5 0.111 0.66 28.7 34.4940 5 120 34.4961 0 2385.70 6 2394.40 6 -99.0000 0 405 1500.5 2.4061 61.5 0.112 0.66 28.8 34.4943 17 121 34.4964 0 -99.00 0 -99.00 0 -99.0000 0 395 1501.0 2.4014 61.5 0.112 0.67 28.9 34.4951 7 121 34.4961 0 -99.00 0 -99.00 0 -99.0000 0 401 1501.0 2.4113 61.5 0.112 0.66 28.6 34.4935 13 121 34.4924 0 -99.00 0 -99.00 0 -99.0000 0 412 1501.3 2.4025 61.5 0.110 0.66 28.8 34.4950 24 121 34.4925 0 -99.00 0 -99.00 0 -99.0000 0 394 1501.4 2.4028 61.5 0.111 0.66 28.8 34.4949 6 121 34.4932 0 -99.00 0 -99.00 0 7.3340 6 396 1501.4 2.4016 61.5 0.112 0.67 28.9 34.4949 8 121 34.4970 0 -99.00 0 -99.00 0 -99.0000 0 402 1501.6 2.4066 61.5 0.110 0.66 28.7 34.4943 14 121 34.4925 0 -99.00 0 -99.00 0 -99.0000 0 406 1501.6 2.4071 61.5 0.113 0.66 28.7 34.4941 18 121 34.4955 0 -99.00 0 -99.00 0 -99.0000 0 391 1501.7 2.4073 61.4 0.113 0.66 28.7 34.4942 3 121 34.4968 0 2384.10 6 2395.70 6 -99.0000 0 389 1501.8 2.4029 61.5 0.111 0.66 28.7 34.4950 1 121 34.4948 0 2382.10 36 2399.40 6 -99.0000 0 398 1501.8 2.4087 61.5 0.111 0.66 28.8 34.4938 10 121 34.4946 0 -99.00 0 -99.00 0 -99.0000 0 399 1502.2 2.4086 61.4 0.111 0.66 28.7 34.4939 11 121 34.4947 0 -99.00 0 -99.00 0 -99.0000 0 410 1502.2 2.4030 61.5 0.111 0.66 28.8 34.4950 22 121 34.4959 0 -99.00 0 -99.00 0 -99.0000 0 400 1502.3 2.4118 61.5 0.111 0.66 28.6 34.4935 12 121 34.4944 0 -99.00 0 -99.00 0 -99.0000 0 408 1502.3 2.4050 61.5 0.110 0.66 28.7 34.4946 20 121 34.4957 0 -99.00 0 -99.00 0 -99.0000 0 404 1502.9 2.4024 61.4 0.111 0.66 28.8 34.4949 16 121 34.4960 0 -99.00 0 -99.00 0 -99.0000 0 403 1503.1 2.4023 61.5 0.110 0.66 28.8 34.4950 15 121 34.4972 0 -99.00 0 -99.00 0 -99.0000 0