*2014/11/20 09:55:59.77 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2008/02/09 03:33:31.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 24 DATA DESCRIPTION : Bottle:Rosette:Up:Stop + CTD:Up FILE TYPE : ASCII CRC : 7047BD7A NUMBER OF CHANNELS : 26 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------------- --------------- -------------- -------------- 1 Sample_Number n/a 328 351 2 Pressure decibar 4.8 4300.8 3 Temperature:Secondary 'deg C (ITS90)' 1.494 5.1231 4 Transmissivity %/metre 53.3 61.7 5 Fluorescence:URU:Seapoint mg/m^3 0.106 0.716 6 Oxygen:Dissolved:SBE mL/L 0.25 7.04 7 Oxygen:Dissolved:SBE umol/kg 11 306.6 8 Salinity:T1:C1 PSS-78 32.6129 34.6831 9 Bottle_Number n/a 1 24 10 Number_of_bin_records n/a 120 121 11 Salinity:Bottle PSS-78 32.6144 34.68 12 Flag:Salinity:Bottle n/a 13 Oxygen:Dissolved mL/L 0.318 7.322 14 Flag:Oxygen:Dissolved n/a 15 Nitrate_plus_Nitrite umol/L 15.3 45.3 16 Flag:Nitrate_plus_Nitrite n/a 17 Silicate umol/L 23.2 173.7 18 Flag:Silicate n/a 19 Phosphate umol/L 1.43 3.22 20 Flag:Phosphate n/a 21 Carbon:Dissolved:Inorganic umol/kg 2046.1 2387.9 22 Flag:Carbon:Dissolved:Inorganic n/a 23 Alkalinity:Total umol/kg 2177.2 2431.1 24 Flag:Alkalinity:Total n/a 25 pH n/a 7.2889 7.7572 26 Flag:pH n/a $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 5 I I 0 2 -99 ' ' 7 F ' ' 1 3 -99 ' ' 9 F ' ' 4 4 -99 ' ' 6 F ' ' 1 5 -99 ' ' 8 F ' ' 3 6 -99 ' ' 7 F ' ' 2 7 -99 ' ' 6 F ' ' 1 8 -99 ' ' 9 F ' ' 4 9 -99 ' ' 3 I I 0 10 ' ' ' ' 5 I I 0 11 -99 ' ' 9 F R4 4 12 0 ' ' 3 NQ C ' ' 13 -99 ' ' 8 F ' ' 3 14 0 ' ' 3 NQ C ' ' 15 -99 ' ' 6 F R4 1 16 0 ' ' 3 NQ C ' ' 17 -99 ' ' 6 F R4 1 18 0 ' ' 3 NQ C ' ' 19 -99 ' ' 7 F R4 2 20 0 ' ' 3 NQ C ' ' 21 -99 ' ' ' ' F8.2 R4 ' ' 22 0 ' ' 3 NQ C ' ' 23 -99 ' ' ' ' F8.2 R4 ' ' 24 0 ' ' 3 NQ C ' ' 25 -99 ' ' ' ' F9.4 R4 ' ' 26 0 ' ' 3 NQ C ' ' $END $REMARKS Flag channels initialized with zeros. Non-zero values have the following significance: -------------------------------------------------------------------------------------- 1 = Sample for this measurement was drawn from water bottle but not analyzed (not normally used). 2 = Acceptable measurement (not normally used). 3 = Questionable measurement (no problem observed in sampling or analysis, but value is not trusted, nonetheless; includes outlyers). 4 = Bad measurement (known problem with sampling or analysis, but not serious enough to completely discard the value). 5 = Not reported (lost sample; unredeemably bad measurement). 6 = Mean of replicate measurements. 7 = Manual chromatographic peak measurement. 8 = Irregular digital chromatographic peak integration. 9 = Sample not drawn for this measurement from this bottle (not normally used). -------------------------------------------------------------------------------------- $END *ADMINISTRATION MISSION : 2008-01 AGENCY : IOS, Ocean Science and Productivity, Sidney, B.C. COUNTRY : Canada PROJECT : Line P SCIENTIST : Robert M. PLATFORM : John P. Tully *LOCATION GEOGRAPHIC AREA : North-East Pacific STATION : P26 EVENT NUMBER : 46 LATITUDE : 49 59.89000 N ! (deg min) LONGITUDE : 145 0.35000 W ! (deg min) WATER DEPTH : 4221 *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0550 $TABLE: SENSORS ! Name Abs Depth Serial No ! ------------------------- -------------- ---------- temperature:primary ' ' 4752 conductivity:primary ' ' 3321 pressure ' ' 75636 temperature:secondary ' ' 2968 conductivity:secondary ' ' 3038 Fluorometer ' ' Seapoint transmissometer:primary ' ' 1005DR Oxygen:SBE ' ' 0047 altimeter: ' ' ' ' irradiance:primary ' ' 4565 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.12 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.0 2008/03/14 13:00:11 2904 2904 CLEAN 5.0.2 2008/03/14 13:01:12 ? ? CTDEDIT 4.61 2008/03/14 13:27:30 2904 2904 ADDSAMP 3.4 2008/03/14 14:07:43 2904 2904 BINAVE 4.1.1 2008/03/14 14:08:58 2904 24 MERGE 3.3 2008/04/08 13:05:36 24 24 CLEAN 5.0.2 2008/04/08 13:06:40 ? ? CALIB 11.7 2008/04/08 13:07:44 24 24 SORT 3.5 2008/04/08 15:27:36 24 24 REMOVECH 8.0 2008/04/08 15:28:01 24 24 CHGUNITS 3.0 2008/04/08 15:28:39 24 24 REORDER 1.2.1 2008/04/08 15:28:51 ? ? HDREDIT2 2.5.1 2008/04/08 15:29:15 ? ? SORT 3.5 2010/05/08 16:19:15 24 24 MERGE 3.3 2010/05/08 16:20:03 24 24 HDREDIT2 2.5.1 2010/05/08 16:28:00 ? ? SORT 3.5 2010/05/08 16:29:44 24 24 CHANGE_FLAGS 1.0 2013/07/16 11:48:58 24 24 CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:33:31 24 24 CHANGE_FLAGS 2.0 2014/11/20 09:55:59 24 24 $END $REMARKS -CLEAN functions: 2008/03/14 13:00:37 20 Set event to last 4 characters of file name -CTDEDIT 2008/03/14 13:27:30 122 changes in channel Salinity:T0:C0 -The following ADDSAMP parameters were used: Sample Number Lookup File: Q:\Cruise_Data_Processing\2008-01\Processing\hydro\addsamp.csv Bottle Channel Name: Bottle_Number -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -The following MERGE parameters were used: 2008/04/08 13:05:33 2008/04/08 13:05:33 2008/04/08 13:05: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Salinity:Bottle, Flag:Salinity:Bottle, Chlorophyll:Extracted, Flag:Chlorophyll:Extracted, Oxygen:Dissolved, Flag:Oxygen:Dissolved, Nitrate_plus_Nitrite, Flag:Nitrate_plus_Nitrite, Silicate, Flag:Silicate, Phosphate, Flag:Phosphate, Dimethyl_Sulphide, Flag:Dimethyl_Sulphide Primary file : Q:\Cruise_Data_Processing\2008-01\Processing\hydro\2008-01-0046.samavg Secondary file: Q:\Cruise_Data_Processing\2008-01\Processing\hydro\2008-01-0046.mrgcln1 -CLEAN functions: 2008/04/08 13:06:36 20 Remove Sea-Bird comments from the header. Remove remark heading: "Comments from secondary" -CALIB parameters: 2008/04/08 13:07:44 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = Q:\Cruise_Data_Processing\2008-01\Processing\doc\2008-01-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 3 Pressure dbars 10 0.5000000E+00 0.1000000E+01 11 Oxygen:Dissolved:SBE mL/L 10 -0.1940000E-01 0.1063300E+01 -SORT parameters: 2008/04/08 15:27:36 Sorted in ascending order of channel Press* -REMOVECH 2008/04/08 15:28:01 11 channels removed. -CHANGE units: 'Oxygen:Dissolved:SBE' changed from mL/L to umol/kg -HEADER EDITS: 2008/04/08 15:29:15 Applied edit header: Q:\Cruise_Data_Processing\2008-01\Processing\doc\2008-01-bot-hdr.txt Channel 2: Pressure [decibar] Units: dbars ==> decibar Format: F11.2 ==> F7.1 Channel 5: Fluorescence:URU:Seapoint [mg/m^3] Name: Fluorescence:Seapoint ==> Fluorescence:URU:Seapoint Channel 6: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 11: Salinity:Bottle [PSS-78] Units: ==> PSS-78 -SORT parameters: 2010/05/08 16:19:15 Sorted in ascending order of channel Sample_Number -The following MERGE parameters were used: 2010/05/08 16:20:02 2010/05/08 16:20:02 2010/05/08 16:20: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Average Primary Channels to Include: ALL Secondary Channels to Include: Carbon:Dissolved:Inorganic, Flag:Carbon:Dissolved:Inorganic, Alkalinity:Total, Flag:Alkalinity:Total, pH, Flag:pH Primary file : H:\Cruise_Data_Processing\Lisa Miller's Carbon Data\2008-01\2008-01-0046.chesrt Secondary file: H:\Cruise_Data_Processing\Lisa Miller's Carbon Data\2008-01\2008-01-0046.iossrt Comments from secondary file: H:\Cruise_Data_Processing\Lisa Miller's Carbon Data\2008-01\2008-01-0046.iossrt --------------------------------------------------------------------------- -SORT parameters: 2010/05/08 16:15:44 Sorted in ascending order of channel Sample_Number [ ] -HEADER EDITS: 2010/05/08 16:28:00 Applied edit header: H:\Cruise_Data_Processing\Lisa Miller's Carbon Data\DIC_ALK_pH.txt -SORT parameters: 2010/05/08 16:29:44 Sorted in ascending order of channel Pressure $END *COMMENTS CTDEDIT was used to remove all data from the primary salinity channel for Niskin Bottle #9. Dissolved OXygen sample #345: average of values 4.406 and 4.401. Sample #340: ALL PROPERTIES: Niskin bottle #13 closed prematurely on many occasions during this cruise, and it appears to have done so during this cast. It is believed that the bottle closed at about the same time as Niskin #8, so the CTD data from that level is likely to be a better match to the bottle contents. Sample #341: ALL PROPERTIES: Niskin bottle #14 closed prematurely on many occasions during this cruise, and it appears to have done so during this cast. It is believed that the bottle closed at about the same time as Niskin #8, so the CTD data from that level is likely to be a better match to the bottle contents. Sample #342: ALL PROPERTIES: Niskin bottle #15 closed prematurely on many occasions during this cruise, and it appears to have done so during this cast. It is believed that the bottle closed at about the same time as Niskin #9, so the CTD data from that level is likely to be a better match to the bottle contents. Sample #343: ALL PROPERTIES: Niskin bottle #16 closed prematurely on many occasions during this cruise, and it appears to have done so during this cast. It is believed that the bottle closed at about the same time as Niskin #10, so the CTD data from that level is likely to be a better match to the bottle contents. Sample #344: ALL PROPERTIES: Niskin bottle #17 closed prematurely on some occasions during this cruise. Bottle salinity and nutrients suggest this did not occur during this cast, but caution is advised. Sample #345: ALL PROPERTIES: Niskin bottle #18 closed prematurely on one occasion during this cruise. Bottle salinity and nutrients suggest this did not occur during this cast, but caution is advised. Analysis methods: ----------------- Chlorophyll samples were analyzed at sea using a Chemistry Turner Designs fluorometer which was calibrated in May 2007 using pure chlorophyll a. Chlorophyll precision was determined by analyzing replicate samples drawn from one Niskin. For details see worksheet “Precision” in file QF 2008-01CHL.xls. Oxygen samples are analyzed on an automated Winkler titration system following the procedures of Carpenter (1965). Samples were analyzed at sea using an automated titration system consisting of a Brinkman Dosimat (model 665) and a PC 900 Colorimeter. For details on precision see file 2008-01-DO-duplicates.xls. Salinity samples were collected in glass bottles and analyzed on a Guildline model 8400B Autosal or a Guildline Portasal 8410A. Salinometers are standardized with IAPSO standard seawater. See file 2008-01-duplicates-sal.xls for information on precision. Nutrient samples were collected in plastic tubes and analyzed fresh at sea using a Technicon AAII autoanalyzer following methods described in Barwell-Clarke and Whitney (1996). For details on nutrient duplicates and precision see file QF 2008-01nuts.xls. Dissolved inorganic carbon (DIC) was determined using coulometric analysis. Total alkalinity (Alk) was determined by potentiometric titration. pH on the total hydrogren ion concentration scale was determined photometrically and is reported at 25C and surface pressure. Complete documentation on DIC, ALK and pH sampling, analysis and precision estimates can be found in the Carbon Excel file from the cruise located in the cruise "DOC" directory. . References: 1. Carpenter, J.H. 1965. The Chesapeake Bay Institute Technique for the Winkler Dissolved Oxygen Method. Limmnol. & Oceanogr., 10: 141-143. 2. J. Barwell-Clarke and F. Whitney. 1996. Institute of Ocean Sciences Nutrient Methods and Analysis. Canadian Technical Report of Hydrography and Ocean Sciences, No. 182, 43 pp. WARNING: All samples from Niskin Bottles #13 to #18 should be treated with care. While the CTD data corresponds to the level at which the bottle was fired, in many cases the bottle closed earlier. Notes in the headers of individual files indicate the probable level at which bottles closed, where evidence exists to make that estimate. Comments from secondary file: H:\Cruise_Data_Processing\Lisa Miller's Carbon Data\2008-01\2008-01-0046.iossrt --------------------------------------------------------------------------- Sample_Number 345: Misfire Sample_Number 344: Misfire Sample_Number 343: Misfire, likely closed between 600 and 800 m Sample_Number 342: Niskin fired @ 200.7 dbar, likely closed @ 1000 m Sample_Number 341: Niskin fired @ 248.0 dbar, likely closed @ 1250 m Sample_Number 340: Niskin fired @ 301.6 dbar, likely closed @ 1250 m *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------- ---- ------ ------------ Pressure dbars 10 -99 () (0.5 1) Oxygen:Dissolved:SBE mL/L 10 -99 () (-0.194E-01 1.0633) $END !-1-- --2--- ---3---- --4-- ---5--- --6--- --7-- ---8---- 9- -10- ---11--- 12 ---13-- 14 --15- 16 --17- 18 --19-- 20 ---21-- 22 ---23-- 24 ---25--- 26 !Samp Pressu Temperat Trans Fluores Oxygen Oxyge Salinity Bo Numb Salinity Fl Oxygen: Fl Nitra Fl Silic Fl Phosph Fl Carbon: Fl Alkalin Fl pH Fl !le_ re ure: missi cence: : n: :T1:C1 tt er_o :Bottle ag Dissolv ag te_ ag ate ag ate ag Dissolv ag ity: ag ag !Numb Secondar vity URU: Dissol Disso ~u ~bin ~o ed ~o plus_ ~t ~i ~p ed: ~g Total ~T : !er y Seapoin ved: lved: mb _rec tt lv Nitri ri ca ha Inorgan an ot pH ! t SBE SBE er ords le ed te te te te ic ic al !---- ------ -------- ----- ------- ------ ----- -------- -- ---- -------- -- ------- -- ----- -- ----- -- ------ -- ------- -- ------- -- -------- -- *END OF HEADER 351 4.8 5.1183 53.3 0.715 7.04 306.5 32.6129 24 121 32.6154 0 7.140 0 15.3 0 23.4 0 1.43 0 2048.10 0 2190.90 0 7.7547 0 350 10.9 5.1199 57.6 0.716 7.04 306.6 32.6130 23 121 32.6155 0 7.123 0 15.4 0 24.2 0 1.45 0 2047.90 0 2194.60 0 7.7572 0 349 25.1 5.1231 57.7 0.710 7.04 306.4 32.6129 22 121 32.6144 0 7.135 0 15.3 0 23.2 0 1.45 0 2049.70 0 2192.30 0 7.7504 0 348 46.0 5.0421 57.9 0.678 7.04 306.5 32.6165 21 121 32.6174 0 7.322 0 15.5 0 24.0 0 1.45 0 2046.10 0 2177.20 0 7.7521 0 347 76.4 4.9706 58.3 0.663 7.04 306.3 32.6194 20 121 32.6225 0 7.167 0 15.6 0 24.2 0 1.45 0 2049.60 0 2204.80 0 7.7527 0 346 101.2 4.9848 59.1 0.406 6.49 282.5 32.7986 19 121 32.7721 0 6.640 0 18.0 0 27.1 0 1.57 0 2070.40 0 2189.90 0 7.7152 0 345 124.1 4.0055 60.2 0.139 4.27 185.5 33.5348 18 121 33.5193 4 4.403 46 30.3 4 52.8 4 2.26 4 2191.30 4 2257.60 4 -99.0000 0 344 151.6 4.0736 60.6 0.127 3.52 153.1 33.6723 17 121 33.6693 4 3.604 4 33.2 46 61.3 46 2.43 46 2206.40 4 2274.80 4 7.4556 4 343 174.9 4.1256 60.7 0.125 3.06 133.0 33.7323 16 121 34.3116 4 0.459 4 44.5 4 136.4 4 3.17 4 2358.60 4 2367.20 4 -99.0000 0 342 200.7 4.0941 60.8 0.123 2.61 113.6 33.7741 15 121 34.3899 4 0.361 4 45.3 4 148.2 4 3.21 4 2378.50 4 2391.40 4 7.3222 4 341 248.0 4.0291 61.0 0.123 1.74 75.6 33.8672 14 121 34.4587 4 0.422 4 45.2 4 158.4 4 3.21 4 2386.90 4 2390.00 4 -99.0000 0 340 301.6 4.0291 61.2 0.126 1.32 57.5 33.9271 13 121 34.4596 4 0.490 4 45.1 4 158.4 4 3.21 4 2381.80 4 2391.90 4 7.3197 4 339 405.1 3.9222 61.3 0.126 0.78 33.9 34.0444 12 121 34.0433 0 0.792 0 43.4 0 102.2 0 3.10 0 2321.60 0 2308.60 0 7.2889 0 338 601.4 3.5111 61.4 0.123 0.25 11.0 34.1973 11 121 34.1920 0 0.478 0 44.6 0 122.9 0 3.17 0 2348.90 6 2359.20 6 7.2894 0 337 801.0 3.1717 61.4 0.119 0.40 17.4 34.3115 10 121 34.3132 0 0.468 0 44.7 0 136.6 0 3.19 0 2365.20 0 2372.80 0 7.3060 0 336 1002.3 2.8572 61.5 0.119 0.29 12.5 34.3897 9 121 34.3863 0 0.318 0 45.3 0 149.3 0 3.22 0 2379.00 0 2386.20 0 7.3093 0 335 1248.2 2.5363 61.6 0.115 0.43 18.8 34.4578 8 120 34.4575 0 0.430 0 45.2 0 160.4 0 3.22 0 2387.90 0 2393.70 0 -99.0000 0 334 1501.4 2.2451 61.6 0.118 0.70 30.4 34.5175 7 121 34.5188 0 0.705 0 44.4 0 165.9 0 3.16 0 2387.90 0 2402.50 0 7.3424 0 333 2001.5 1.8931 61.6 0.109 1.37 59.3 34.5906 6 121 34.5906 0 1.389 0 42.7 0 172.6 0 3.02 0 2377.60 0 2415.10 0 7.4068 0 332 2501.4 1.6894 61.7 0.108 1.96 84.9 34.6315 5 121 34.6315 0 2.032 0 40.9 0 173.7 0 2.90 0 2364.30 0 2420.80 0 -99.0000 0 331 3001.9 1.5636 61.7 0.107 2.47 107.2 34.6571 4 121 34.6562 0 2.558 0 39.1 0 172.3 0 2.78 0 2357.80 0 2423.40 0 7.5224 0 330 3498.6 1.5000 61.7 0.107 2.84 123.5 34.6726 3 121 34.6732 0 2.967 0 38.5 0 171.4 0 2.70 0 2338.40 0 2421.70 0 7.5406 6 329 4000.6 1.4940 61.6 0.106 3.06 132.9 34.6808 2 121 34.6798 0 3.182 0 37.5 0 170.6 0 2.65 0 2339.20 0 2431.10 0 7.5558 0 328 4300.8 1.5124 61.3 0.106 3.12 135.7 34.6831 1 121 34.6800 0 3.297 0 37.5 0 171.9 0 2.64 0 2337.30 0 2430.30 0 -99.0000 0