*2014/11/20 09:55:59.49 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2008/02/06 21:10:34.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 24 DATA DESCRIPTION : Bottle:Rosette:Up:Stop + CTD:Up FILE TYPE : ASCII CRC : D52445C2 NUMBER OF CHANNELS : 26 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------------- --------------- -------------- -------------- 1 Sample_Number n/a 266 289 2 Pressure decibar 7.4 4021.1 3 Temperature:Secondary 'deg C (ITS90)' 1.5299 5.7771 4 Transmissivity %/metre 56.6 61.6 5 Fluorescence:URU:Seapoint mg/m^3 0.108 0.823 6 Oxygen:Dissolved:SBE mL/L 0.35 7.01 7 Oxygen:Dissolved:SBE umol/kg 15.3 305.1 8 Salinity:T1:C1 PSS-78 32.5897 34.6765 9 Bottle_Number n/a 1 24 10 Number_of_bin_records n/a 121 121 11 Salinity:Bottle PSS-78 32.5858 34.6779 12 Flag:Salinity:Bottle n/a 13 Oxygen:Dissolved mL/L 0.305 7.064 14 Flag:Oxygen:Dissolved n/a 15 Nitrate_plus_Nitrite umol/L 12.9 45.5 16 Flag:Nitrate_plus_Nitrite n/a 17 Silicate umol/L 17.1 177.3 18 Flag:Silicate n/a 19 Phosphate umol/L 1.26 3.26 20 Flag:Phosphate n/a 21 Carbon:Dissolved:Inorganic umol/kg 2034.3 2394.3 22 Flag:Carbon:Dissolved:Inorganic n/a 23 Alkalinity:Total umol/kg 2181 2436.4 24 Flag:Alkalinity:Total n/a 25 pH n/a 7.2923 7.7837 26 Flag:pH n/a $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 5 I I 0 2 -99 ' ' 7 F ' ' 1 3 -99 ' ' 9 F ' ' 4 4 -99 ' ' 6 F ' ' 1 5 -99 ' ' 8 F ' ' 3 6 -99 ' ' 7 F ' ' 2 7 -99 ' ' 6 F ' ' 1 8 -99 ' ' 9 F ' ' 4 9 -99 ' ' 3 I I 0 10 ' ' ' ' 5 I I 0 11 -99 ' ' 9 F R4 4 12 0 ' ' 3 NQ C ' ' 13 -99 ' ' 8 F ' ' 3 14 0 ' ' 3 NQ C ' ' 15 -99 ' ' 6 F R4 1 16 0 ' ' 3 NQ C ' ' 17 -99 ' ' 6 F R4 1 18 0 ' ' 3 NQ C ' ' 19 -99 ' ' 7 F R4 2 20 0 ' ' 3 NQ C ' ' 21 -99 ' ' ' ' F8.2 R4 ' ' 22 0 ' ' 3 NQ C ' ' 23 -99 ' ' ' ' F8.2 R4 ' ' 24 0 ' ' 3 NQ C ' ' 25 -99 ' ' ' ' F9.4 R4 ' ' 26 0 ' ' 3 NQ C ' ' $END $REMARKS Flag channels initialized with zeros. Non-zero values have the following significance: -------------------------------------------------------------------------------------- 1 = Sample for this measurement was drawn from water bottle but not analyzed (not normally used). 2 = Acceptable measurement (not normally used). 3 = Questionable measurement (no problem observed in sampling or analysis, but value is not trusted, nonetheless; includes outlyers). 4 = Bad measurement (known problem with sampling or analysis, but not serious enough to completely discard the value). 5 = Not reported (lost sample; unredeemably bad measurement). 6 = Mean of replicate measurements. 7 = Manual chromatographic peak measurement. 8 = Irregular digital chromatographic peak integration. 9 = Sample not drawn for this measurement from this bottle (not normally used). -------------------------------------------------------------------------------------- $END *ADMINISTRATION MISSION : 2008-01 AGENCY : IOS, Ocean Science and Productivity, Sidney, B.C. COUNTRY : Canada PROJECT : Line P SCIENTIST : Robert M. PLATFORM : John P. Tully *LOCATION GEOGRAPHIC AREA : North-East Pacific STATION : P20 EVENT NUMBER : 40 LATITUDE : 49 33.99000 N ! (deg min) LONGITUDE : 138 40.07000 W ! (deg min) *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0550 $TABLE: SENSORS ! Name Abs Depth Serial No ! ------------------------- -------------- ---------- temperature:primary ' ' 4752 conductivity:primary ' ' 3321 pressure ' ' 75636 temperature:secondary ' ' 2968 conductivity:secondary ' ' 3038 Fluorometer ' ' Seapoint transmissometer:primary ' ' 1005DR Oxygen:SBE ' ' 0047 altimeter: ' ' ' ' irradiance:primary ' ' 4565 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.12 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.0 2008/03/14 13:00:04 2904 2904 CLEAN 5.0.2 2008/03/14 13:01:05 ? ? ADDSAMP 3.4 2008/03/14 14:07:37 2904 2904 BINAVE 4.1.1 2008/03/14 14:08:55 2904 24 MERGE 3.3 2008/04/08 13:05:35 24 24 CLEAN 5.0.2 2008/04/08 13:06:39 ? ? CALIB 11.7 2008/04/08 13:07:44 24 24 SORT 3.5 2008/04/08 15:27:36 24 24 REMOVECH 8.0 2008/04/08 15:28:01 24 24 CHGUNITS 3.0 2008/04/08 15:28:38 24 24 REORDER 1.2.1 2008/04/08 15:28:50 ? ? HDREDIT2 2.5.1 2008/04/08 15:29:14 ? ? SORT 3.5 2010/05/08 16:19:14 24 24 MERGE 3.3 2010/05/08 16:20:02 24 24 HDREDIT2 2.5.1 2010/05/08 16:28:00 ? ? SORT 3.5 2010/05/08 16:29:44 24 24 CHANGE_FLAGS 1.0 2013/07/16 11:48:58 24 24 CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:33:31 24 24 CHANGE_FLAGS 2.0 2014/11/20 09:55:59 24 24 $END $REMARKS -CLEAN functions: 2008/03/14 13:00:37 20 Set event to last 4 characters of file name -The following ADDSAMP parameters were used: Sample Number Lookup File: Q:\Cruise_Data_Processing\2008-01\Processing\hydro\addsamp.csv Bottle Channel Name: Bottle_Number -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -The following MERGE parameters were used: 2008/04/08 13:05:33 2008/04/08 13:05:33 2008/04/08 13:05: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Salinity:Bottle, Flag:Salinity:Bottle, Chlorophyll:Extracted, Flag:Chlorophyll:Extracted, Oxygen:Dissolved, Flag:Oxygen:Dissolved, Nitrate_plus_Nitrite, Flag:Nitrate_plus_Nitrite, Silicate, Flag:Silicate, Phosphate, Flag:Phosphate, Dimethyl_Sulphide, Flag:Dimethyl_Sulphide Primary file : Q:\Cruise_Data_Processing\2008-01\Processing\hydro\2008-01-0040.samavg Secondary file: Q:\Cruise_Data_Processing\2008-01\Processing\hydro\2008-01-0040.mrgcln1 -CLEAN functions: 2008/04/08 13:06:36 20 Remove Sea-Bird comments from the header. Remove remark heading: "Comments from secondary" -CALIB parameters: 2008/04/08 13:07:44 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = Q:\Cruise_Data_Processing\2008-01\Processing\doc\2008-01-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 3 Pressure dbars 10 0.5000000E+00 0.1000000E+01 11 Oxygen:Dissolved:SBE mL/L 10 -0.1940000E-01 0.1063300E+01 -SORT parameters: 2008/04/08 15:27:36 Sorted in ascending order of channel Press* -REMOVECH 2008/04/08 15:28:01 11 channels removed. -CHANGE units: 'Oxygen:Dissolved:SBE' changed from mL/L to umol/kg -HEADER EDITS: 2008/04/08 15:29:14 Applied edit header: Q:\Cruise_Data_Processing\2008-01\Processing\doc\2008-01-bot-hdr.txt Channel 2: Pressure [decibar] Units: dbars ==> decibar Format: F11.2 ==> F7.1 Channel 5: Fluorescence:URU:Seapoint [mg/m^3] Name: Fluorescence:Seapoint ==> Fluorescence:URU:Seapoint Channel 6: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 11: Salinity:Bottle [PSS-78] Units: ==> PSS-78 -SORT parameters: 2010/05/08 16:19:14 Sorted in ascending order of channel Sample_Number -The following MERGE parameters were used: 2010/05/08 16:20:02 2010/05/08 16:20:02 2010/05/08 16:20: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Average Primary Channels to Include: ALL Secondary Channels to Include: Carbon:Dissolved:Inorganic, Flag:Carbon:Dissolved:Inorganic, Alkalinity:Total, Flag:Alkalinity:Total, pH, Flag:pH Primary file : H:\Cruise_Data_Processing\Lisa Miller's Carbon Data\2008-01\2008-01-0040.chesrt Secondary file: H:\Cruise_Data_Processing\Lisa Miller's Carbon Data\2008-01\2008-01-0040.iossrt Comments from secondary file: H:\Cruise_Data_Processing\Lisa Miller's Carbon Data\2008-01\2008-01-0040.iossrt --------------------------------------------------------------------------- -SORT parameters: 2010/05/08 16:15:43 Sorted in ascending order of channel Sample_Number [ ] -HEADER EDITS: 2010/05/08 16:28:00 Applied edit header: H:\Cruise_Data_Processing\Lisa Miller's Carbon Data\DIC_ALK_pH.txt -SORT parameters: 2010/05/08 16:29:44 Sorted in ascending order of channel Pressure $END *COMMENTS Dissolved Oxygen sample #266: flakes in sample Dissolved Oxygen Sample #283: Average of values 1.240 and 1.259 Sample_Number 272: Nutrients: N rerun Sample_Number 280: Nutrients: N rerun Sample_Number 281: Nutrients: N rerun Sample_Number 282: Nutrients: N rerun Sample #278: ALL PROPERTIES: Niskin bottle #13 closed prematurely on many occasions during this cruise, and it appears to have done so during this cast. It is believed that the bottle closed at about the same time as Niskin #8, so the CTD data from that level is likely to be a better match to the bottle contents. Sample #279: ALL PROPERTIES: Niskin bottle #14 closed prematurely on many occasions during this cruise, and it appears to have done so during this cast. It is believed that the bottle closed at about the same time as Niskin #8, so the CTD data from that level is likely to be a better match to the bottle contents. Sample #280: ALL PROPERTIES: Niskin bottle #15 closed prematurely on many occasions during this cruise, and it appears to have done so during this cast. It is believed that the bottle closed at about the same time as Niskin #9, so the CTD data from that level is likely to be a better match to the bottle contents. Sample #281: ALL PROPERTIES: Niskin bottle #16 closed prematurely on many occasions during this cruise, and it appears to have done so during this cast. It is believed that the bottle closed at about the same time as Niskin #10, so the CTD data from that level is likely to be a better match to the bottle contents. Sample #282: ALL PROPERTIES: Niskin bottle #17 closed prematurely on many occasions during this cruise, and it appears to have done so during this cast. It is believed that the bottle closed at about the same time as Niskin #11, so the CTD data from that level is likely to be a better match to the bottle contents. Sample #283: ALL PROPERTIES: Niskin bottle #18 appears to have closed prematurely during this cast. It is believed that the bottle closed at about the same time as Niskin #12, so the CTD data from that level is likely to be a better match to the bottle contents. Analysis methods: ----------------- Chlorophyll samples were analyzed at sea using a Chemistry Turner Designs fluorometer which was calibrated in May 2007 using pure chlorophyll a. Chlorophyll precision was determined by analyzing replicate samples drawn from one Niskin. For details see worksheet “Precision” in file QF 2008-01CHL.xls. Oxygen samples are analyzed on an automated Winkler titration system following the procedures of Carpenter (1965). Samples were analyzed at sea using an automated titration system consisting of a Brinkman Dosimat (model 665) and a PC 900 Colorimeter. For details on precision see file 2008-01-DO-duplicates.xls. Salinity samples were collected in glass bottles and analyzed on a Guildline model 8400B Autosal or a Guildline Portasal 8410A. Salinometers are standardized with IAPSO standard seawater. See file 2008-01-duplicates-sal.xls for information on precision. Nutrient samples were collected in plastic tubes and analyzed fresh at sea using a Technicon AAII autoanalyzer following methods described in Barwell-Clarke and Whitney (1996). For details on nutrient duplicates and precision see file QF 2008-01nuts.xls. Dissolved inorganic carbon (DIC) was determined using coulometric analysis. Total alkalinity (Alk) was determined by potentiometric titration. pH on the total hydrogren ion concentration scale was determined photometrically and is reported at 25C and surface pressure. Complete documentation on DIC, ALK and pH sampling, analysis and precision estimates can be found in the Carbon Excel file from the cruise located in the cruise "DOC" directory. . References: 1. Carpenter, J.H. 1965. The Chesapeake Bay Institute Technique for the Winkler Dissolved Oxygen Method. Limmnol. & Oceanogr., 10: 141-143. 2. J. Barwell-Clarke and F. Whitney. 1996. Institute of Ocean Sciences Nutrient Methods and Analysis. Canadian Technical Report of Hydrography and Ocean Sciences, No. 182, 43 pp. WARNING: All samples from Niskin Bottles #13 to #18 should be treated with care. While the CTD data corresponds to the level at which the bottle was fired, in many cases the bottle closed earlier. Notes in the headers of individual files indicate the probable level at which bottles closed, where evidence exists to make that estimate. Comments from secondary file: H:\Cruise_Data_Processing\Lisa Miller's Carbon Data\2008-01\2008-01-0040.iossrt --------------------------------------------------------------------------- Sample_Number 289: pH: Large difference between replicates Sample_Number 283: Niskin fired @ 126.2 dbar, likely closed @ 400 m Sample_Number 282: Niskin fired @ 150.3 dbar, likely closed @ 600 m Sample_Number 281: Niskin fired @ 173.6 dbar, likelyi closed @ 800 m Sample_Number 280: Niskin fired @ 201.4 dbar, likely closed @ 1000 m Sample_Number 279: Niskin fired @ 249.4 dbar, likely closed @ 1250 m Sample_Number 278: Niskin fired @ 299.4 dbar, likely closed @ 1250 m *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------- ---- ------ ------------ Pressure dbars 10 -99 () (0.5 1) Oxygen:Dissolved:SBE mL/L 10 -99 () (-0.194E-01 1.0633) $END !-1-- --2--- ---3---- --4-- ---5--- --6--- --7-- ---8---- 9- -10- ---11--- 12 ---13-- 14 --15- 16 --17- 18 --19-- 20 ---21-- 22 ---23-- 24 ---25--- 26 !Samp Pressu Temperat Trans Fluores Oxygen Oxyge Salinity Bo Numb Salinity Fl Oxygen: Fl Nitra Fl Silic Fl Phosph Fl Carbon: Fl Alkalin Fl pH Fl !le_ re ure: missi cence: : n: :T1:C1 tt er_o :Bottle ag Dissolv ag te_ ag ate ag ate ag Dissolv ag ity: ag ag !Numb Secondar vity URU: Dissol Disso ~u ~bin ~o ed ~o plus_ ~t ~i ~p ed: ~g Total ~T : !er y Seapoin ved: lved: mb _rec tt lv Nitri ri ca ha Inorgan an ot pH ! t SBE SBE er ords le ed te te te te ic ic al !---- ------ -------- ----- ------- ------ ----- -------- -- ---- -------- -- ------- -- ----- -- ----- -- ------ -- ------- -- ------- -- -------- -- *END OF HEADER 289 7.4 5.7679 56.6 0.601 7.01 305.1 32.5897 24 121 32.5890 0 7.051 0 12.9 0 17.7 0 1.26 0 2036.50 0 2181.00 0 7.7717 36 288 9.3 5.7677 56.9 0.581 6.99 304.4 32.5897 23 121 32.5858 0 7.064 0 13.0 0 17.5 0 1.28 0 2034.30 0 2189.40 0 7.7758 0 287 27.0 5.7669 57.0 0.823 7.00 304.8 32.5901 22 121 32.5913 0 7.045 0 12.9 0 17.1 0 1.28 0 2034.80 0 2195.80 0 7.7761 0 286 48.7 5.7659 57.2 0.823 6.99 304.4 32.5921 21 121 32.5953 0 7.056 0 13.0 0 17.3 0 1.27 0 2036.80 0 2187.30 0 7.7787 0 285 74.8 5.7682 57.3 0.808 6.98 303.9 32.5925 20 121 32.5941 0 7.048 0 13.0 0 17.2 0 1.27 0 2036.40 0 2187.90 0 7.7729 0 284 99.8 5.7718 57.3 0.803 6.97 303.4 32.5934 19 121 32.5950 0 7.038 0 13.0 0 17.5 0 1.27 0 2040.50 0 2193.90 0 7.7837 0 283 126.2 5.7771 59.8 0.186 5.59 243.4 33.4563 18 121 34.0035 4 1.244 64 41.1 4 89.9 4 2.91 4 2296.20 4 2303.40 4 -99.0000 0 282 150.3 5.7642 60.6 0.129 5.17 224.9 33.6776 17 121 34.1536 4 0.652 4 44.5 4 113.2 4 3.09 4 2339.90 4 2334.90 4 7.2935 4 281 173.6 5.6677 60.5 0.127 4.60 200.0 33.7602 16 121 34.2647 4 0.418 4 44.5 4 129.4 4 3.17 4 2359.50 4 2357.40 4 -99.0000 0 280 201.4 5.4274 60.5 0.123 3.95 171.8 33.8049 15 121 34.3471 4 0.384 4 44.8 4 142.2 4 3.21 4 2374.70 4 2367.80 4 7.2978 46 279 249.4 4.8709 60.8 0.121 2.87 125.0 33.8397 14 121 34.4345 4 0.308 4 45.5 4 156.1 4 3.23 4 2389.90 4 2400.00 4 -99.0000 0 278 299.4 4.6158 61.0 0.122 2.16 93.9 33.8895 13 121 34.4174 4 0.319 4 45.5 4 153.9 4 3.23 4 2388.50 4 2389.60 4 7.2993 4 277 397.4 4.3235 61.2 0.123 1.23 53.3 34.0038 12 121 34.0040 0 1.245 0 41.5 6 90.5 6 2.96 6 2305.50 0 2307.20 0 -99.0000 0 276 598.8 3.7523 61.4 0.121 0.65 28.4 34.1529 11 121 34.1535 0 0.648 0 44.3 0 114.0 0 3.13 0 2340.00 0 2334.90 0 7.2924 0 275 802.1 3.4095 61.3 0.120 0.44 19.0 34.2736 10 121 34.2747 0 0.406 0 44.4 0 129.0 0 3.19 0 2359.50 0 2358.50 0 7.2923 0 274 999.3 3.0478 61.4 0.119 0.38 16.7 34.3509 9 121 34.3488 0 0.371 0 44.9 0 143.3 0 3.23 0 2373.00 0 2371.10 0 7.2965 0 273 1250.0 2.6525 61.4 0.116 0.35 15.3 34.4390 8 121 34.4392 0 0.305 0 45.3 0 155.6 0 3.26 0 2394.30 0 2399.40 0 -99.0000 0 272 1501.3 2.3673 61.4 0.116 0.55 23.7 34.4983 7 121 34.4986 0 0.523 0 44.8 0 165.2 0 3.20 0 2392.10 0 2404.20 0 7.3246 0 271 2000.5 1.9473 61.5 0.111 1.24 53.7 34.5832 6 121 34.5798 0 1.265 0 43.4 0 173.1 0 3.08 0 2384.60 0 2418.70 0 -99.0000 0 269 2500.2 1.7357 61.5 0.112 1.84 79.8 34.6251 4 121 34.6213 0 1.887 0 41.4 0 173.6 0 2.94 0 2370.10 0 2421.80 0 7.4474 0 270 2501.5 1.7353 61.6 0.111 1.84 79.8 34.6252 5 121 34.6232 0 1.943 0 41.4 0 174.9 0 2.95 0 2369.70 0 2421.10 0 7.4474 6 268 2999.7 1.5883 61.6 0.110 2.40 104.3 34.6537 3 121 34.6538 0 2.476 0 39.8 0 174.3 0 2.82 0 2356.70 0 2422.50 0 -99.0000 0 267 3499.2 1.5299 61.5 0.108 2.76 120.0 34.6693 2 121 34.6696 0 2.863 0 38.5 0 174.3 0 2.74 0 2343.90 0 2429.40 0 -99.0000 0 266 4021.1 1.5383 60.7 0.108 2.94 127.5 34.6765 1 121 34.6779 0 3.088 3 38.0 0 177.3 0 2.70 0 2345.60 0 2436.40 0 7.5557 0