*2014/11/20 09:55:58.77 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2008/02/05 00:18:38.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 24 DATA DESCRIPTION : Bottle:Rosette:Up:Stop + CTD:Up FILE TYPE : ASCII CRC : A759509C NUMBER OF CHANNELS : 26 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------------- --------------- -------------- -------------- 1 Sample_Number n/a 216 239 2 Pressure decibar 5.8 3672 3 Temperature:Secondary 'deg C (ITS90)' 1.5665 6.3193 4 Transmissivity %/metre 56.7 61.7 5 Fluorescence:URU:Seapoint mg/m^3 0.108 0.787 6 Oxygen:Dissolved:SBE mL/L 0.3 6.97 7 Oxygen:Dissolved:SBE umol/kg 13 303.4 8 Salinity:T1:C1 PSS-78 32.5295 34.6666 9 Bottle_Number n/a 1 24 10 Number_of_bin_records n/a 121 121 11 Salinity:Bottle PSS-78 32.5267 34.6661 12 Flag:Salinity:Bottle n/a 13 Oxygen:Dissolved mL/L 0.266 6.994 14 Flag:Oxygen:Dissolved n/a 15 Nitrate_plus_Nitrite umol/L 12.5 45.9 16 Flag:Nitrate_plus_Nitrite n/a 17 Silicate umol/L 16 178.4 18 Flag:Silicate n/a 19 Phosphate umol/L 1.22 3.24 20 Flag:Phosphate n/a 21 Carbon:Dissolved:Inorganic umol/kg 2011.7 2393.6 22 Flag:Carbon:Dissolved:Inorganic n/a 23 Alkalinity:Total umol/kg 2180.9 2434.9 24 Flag:Alkalinity:Total n/a 25 pH n/a 7.2911 7.7701 26 Flag:pH n/a $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 5 I I 0 2 -99 ' ' 7 F ' ' 1 3 -99 ' ' 9 F ' ' 4 4 -99 ' ' 6 F ' ' 1 5 -99 ' ' 8 F ' ' 3 6 -99 ' ' 7 F ' ' 2 7 -99 ' ' 6 F ' ' 1 8 -99 ' ' 9 F ' ' 4 9 -99 ' ' 3 I I 0 10 ' ' ' ' 5 I I 0 11 -99 ' ' 9 F R4 4 12 0 ' ' 3 NQ C ' ' 13 -99 ' ' 8 F ' ' 3 14 0 ' ' 3 NQ C ' ' 15 -99 ' ' 6 F R4 1 16 0 ' ' 3 NQ C ' ' 17 -99 ' ' 6 F R4 1 18 0 ' ' 3 NQ C ' ' 19 -99 ' ' 7 F R4 2 20 0 ' ' 3 NQ C ' ' 21 -99 ' ' ' ' F8.2 R4 ' ' 22 0 ' ' 3 NQ C ' ' 23 -99 ' ' ' ' F8.2 R4 ' ' 24 0 ' ' 3 NQ C ' ' 25 -99 ' ' ' ' F9.4 R4 ' ' 26 0 ' ' 3 NQ C ' ' $END $REMARKS Flag channels initialized with zeros. Non-zero values have the following significance: -------------------------------------------------------------------------------------- 1 = Sample for this measurement was drawn from water bottle but not analyzed (not normally used). 2 = Acceptable measurement (not normally used). 3 = Questionable measurement (no problem observed in sampling or analysis, but value is not trusted, nonetheless; includes outlyers). 4 = Bad measurement (known problem with sampling or analysis, but not serious enough to completely discard the value). 5 = Not reported (lost sample; unredeemably bad measurement). 6 = Mean of replicate measurements. 7 = Manual chromatographic peak measurement. 8 = Irregular digital chromatographic peak integration. 9 = Sample not drawn for this measurement from this bottle (not normally used). -------------------------------------------------------------------------------------- $END *ADMINISTRATION MISSION : 2008-01 AGENCY : IOS, Ocean Science and Productivity, Sidney, B.C. COUNTRY : Canada PROJECT : Line P SCIENTIST : Robert M. PLATFORM : John P. Tully *LOCATION GEOGRAPHIC AREA : North-East Pacific STATION : P16 EVENT NUMBER : 35 LATITUDE : 49 17.03000 N ! (deg min) LONGITUDE : 134 40.22000 W ! (deg min) *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0550 $TABLE: SENSORS ! Name Abs Depth Serial No ! ------------------------- -------------- ---------- temperature:primary ' ' 4752 conductivity:primary ' ' 3321 pressure ' ' 75636 temperature:secondary ' ' 2968 conductivity:secondary ' ' 3038 Fluorometer ' ' Seapoint transmissometer:primary ' ' 1005DR Oxygen:SBE ' ' 0047 altimeter: ' ' ' ' irradiance:primary ' ' 4565 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.12 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.0 2008/03/14 12:59:58 2904 2904 CLEAN 5.0.2 2008/03/14 13:01:00 ? ? ADDSAMP 3.4 2008/03/14 14:07:32 2904 2904 BINAVE 4.1.1 2008/03/14 14:08:53 2904 24 MERGE 3.3 2008/04/08 13:05:35 24 24 CLEAN 5.0.2 2008/04/08 13:06:39 ? ? CALIB 11.7 2008/04/08 13:07:43 24 24 SORT 3.5 2008/04/08 15:27:35 24 24 REMOVECH 8.0 2008/04/08 15:28:01 24 24 CHGUNITS 3.0 2008/04/08 15:28:38 24 24 REORDER 1.2.1 2008/04/08 15:28:50 ? ? HDREDIT2 2.5.1 2008/04/08 15:29:14 ? ? SORT 3.5 2010/05/08 16:19:14 24 24 MERGE 3.3 2010/05/08 16:20:02 24 24 HDREDIT2 2.5.1 2010/05/08 16:28:00 ? ? SORT 3.5 2010/05/08 16:29:44 24 24 CHANGE_FLAGS 1.0 2013/12/31 10:48:27 24 24 CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/31 10:49:53 24 24 CHANGE_FLAGS 2.0 2014/11/20 09:55:58 24 24 $END $REMARKS -CLEAN functions: 2008/03/14 13:00:37 20 Set event to last 4 characters of file name -The following ADDSAMP parameters were used: Sample Number Lookup File: Q:\Cruise_Data_Processing\2008-01\Processing\hydro\addsamp.csv Bottle Channel Name: Bottle_Number -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -The following MERGE parameters were used: 2008/04/08 13:05:33 2008/04/08 13:05:33 2008/04/08 13:05: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Salinity:Bottle, Flag:Salinity:Bottle, Chlorophyll:Extracted, Flag:Chlorophyll:Extracted, Oxygen:Dissolved, Flag:Oxygen:Dissolved, Nitrate_plus_Nitrite, Flag:Nitrate_plus_Nitrite, Silicate, Flag:Silicate, Phosphate, Flag:Phosphate, Dimethyl_Sulphide, Flag:Dimethyl_Sulphide Primary file : Q:\Cruise_Data_Processing\2008-01\Processing\hydro\2008-01-0035.samavg Secondary file: Q:\Cruise_Data_Processing\2008-01\Processing\hydro\2008-01-0035.mrgcln1 -CLEAN functions: 2008/04/08 13:06:36 20 Remove Sea-Bird comments from the header. Remove remark heading: "Comments from secondary" -CALIB parameters: 2008/04/08 13:07:43 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = Q:\Cruise_Data_Processing\2008-01\Processing\doc\2008-01-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 3 Pressure dbars 10 0.5000000E+00 0.1000000E+01 11 Oxygen:Dissolved:SBE mL/L 10 -0.1940000E-01 0.1063300E+01 -SORT parameters: 2008/04/08 15:27:35 Sorted in ascending order of channel Press* -REMOVECH 2008/04/08 15:28:01 11 channels removed. -CHANGE units: 'Oxygen:Dissolved:SBE' changed from mL/L to umol/kg -HEADER EDITS: 2008/04/08 15:29:14 Applied edit header: Q:\Cruise_Data_Processing\2008-01\Processing\doc\2008-01-bot-hdr.txt Channel 2: Pressure [decibar] Units: dbars ==> decibar Format: F11.2 ==> F7.1 Channel 5: Fluorescence:URU:Seapoint [mg/m^3] Name: Fluorescence:Seapoint ==> Fluorescence:URU:Seapoint Channel 6: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 11: Salinity:Bottle [PSS-78] Units: ==> PSS-78 -SORT parameters: 2010/05/08 16:19:14 Sorted in ascending order of channel Sample_Number -The following MERGE parameters were used: 2010/05/08 16:20:02 2010/05/08 16:20:02 2010/05/08 16:20: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Average Primary Channels to Include: ALL Secondary Channels to Include: Carbon:Dissolved:Inorganic, Flag:Carbon:Dissolved:Inorganic, Alkalinity:Total, Flag:Alkalinity:Total, pH, Flag:pH Primary file : H:\Cruise_Data_Processing\Lisa Miller's Carbon Data\2008-01\2008-01-0035.chesrt Secondary file: H:\Cruise_Data_Processing\Lisa Miller's Carbon Data\2008-01\2008-01-0035.iossrt Comments from secondary file: H:\Cruise_Data_Processing\Lisa Miller's Carbon Data\2008-01\2008-01-0035.iossrt --------------------------------------------------------------------------- -SORT parameters: 2010/05/08 16:15:43 Sorted in ascending order of channel Sample_Number [ ] -HEADER EDITS: 2010/05/08 16:28:00 Applied edit header: H:\Cruise_Data_Processing\Lisa Miller's Carbon Data\DIC_ALK_pH.txt -SORT parameters: 2010/05/08 16:29:44 Sorted in ascending order of channel Pressure $END *COMMENTS Sample_Number 224: Salinity: A duplicate 34.3689 was rejected as an outlier Dissolved Oxygen sample #223: flag-bubble on lense-reading inaccurate Sample_Number 216: Nutrients: Si rerun Sample_Number 217: Nutrients: Si rerun Sample_Number 218: Nutrients: Si rerun Sample_Number 219: Nutrients: Si rerun Sample_Number 220: Nutrients: Si rerun Sample_Number 221: Nutrients: Si rerun Sample_Number 222: Nutrients: Si rerun Sample_Number 223: Nutrients: Si rerun Sample_Number 224: Nutrients: Si rerun Sample_Number 225: Nutrients: Si rerun Sample_Number 226: Nutrients: Si rerun Sample_Number 227: Nutrients: Si rerun Sample_Number 228: Nutrients: Si rerun Sample_Number 229: Nutrients: Si rerun Sample_Number 230: Nutrients: Si rerun Sample_Number 231: Nutrients: Si rerun Sample_Number 232: Nutrients: Si rerun Sample_Number 233: Nutrients: Si rerun Sample_Number 234: Nutrients: Si rerun Sample_Number 235: Nutrients: Si rerun Sample_Number 236: Nutrients: Si rerun Sample_Number 237: Nutrients: Si rerun Sample_Number 238: Nutrients: Si rerun Sample_Number 239: Nutrients: Si rerun Sample #228: ALL PROPERTIES: Niskin bottle #13 closed prematurely on many occasions during this cruise, and it appears to have done so during this cast. It is believed that the bottle closed at about the same time as Niskin #8, so the CTD data from that level is likely to be a better match to the bottle contents. Sample #229: ALL PROPERTIES: Niskin bottle #14 closed prematurely on many occasions during this cruise, and it appears to have done so during this cast. It is believed that the bottle closed at about the same time as Niskin #8, so the CTD data from that level is likely to be a better match to the bottle contents. Sample #230: ALL PROPERTIES: Niskin bottle #15 closed prematurely on many occasions during this cruise, and it appears to have done so during this cast. It is believed that the bottle closed at about the same time as Niskin #9, so the CTD data from that level is likely to be a better match to the bottle contents. Sample #231: ALL PROPERTIES: Niskin bottle #16 closed prematurely on many occasions during this cruise, and it appears to have done so during this cast. It is believed that the bottle closed at about the same time as Niskin #10, so the CTD data from that level is likely to be a better match to the bottle contents. Sample #232: ALL PROPERTIES: Niskin bottle #17 closed prematurely on many occasions during this cruise, and it appears to have done so during this cast. It is believed that the bottle closed at about the same time as Niskin #11, so the CTD data from that level is likely to be a better match to the bottle contents. Sample #233: ALL PROPERTIES: Niskin bottle #18, from which this sample was taken, closed prematurely on a few occasions. The salinity data compares quite well with the CTD, so it is likely that there was no problem for this case. Analysis methods: ----------------- Chlorophyll samples were analyzed at sea using a Chemistry Turner Designs fluorometer which was calibrated in May 2007 using pure chlorophyll a. Chlorophyll precision was determined by analyzing replicate samples drawn from one Niskin. For details see worksheet “Precision” in file QF 2008-01CHL.xls. Oxygen samples are analyzed on an automated Winkler titration system following the procedures of Carpenter (1965). Samples were analyzed at sea using an automated titration system consisting of a Brinkman Dosimat (model 665) and a PC 900 Colorimeter. For details on precision see file 2008-01-DO-duplicates.xls. Salinity samples were collected in glass bottles and analyzed on a Guildline model 8400B Autosal or a Guildline Portasal 8410A. Salinometers are standardized with IAPSO standard seawater. See file 2008-01-duplicates-sal.xls for information on precision. Nutrient samples were collected in plastic tubes and analyzed fresh at sea using a Technicon AAII autoanalyzer following methods described in Barwell-Clarke and Whitney (1996). For details on nutrient duplicates and precision see file QF 2008-01nuts.xls. Dissolved inorganic carbon (DIC) was determined using coulometric analysis. Total alkalinity (Alk) was determined by potentiometric titration. pH on the total hydrogren ion concentration scale was determined photometrically and is reported at 25C and surface pressure. Complete documentation on DIC, ALK and pH sampling, analysis and precision estimates can be found in the Carbon Excel file from the cruise located in the cruise "DOC" directory. . References: 1. Carpenter, J.H. 1965. The Chesapeake Bay Institute Technique for the Winkler Dissolved Oxygen Method. Limmnol. & Oceanogr., 10: 141-143. 2. J. Barwell-Clarke and F. Whitney. 1996. Institute of Ocean Sciences Nutrient Methods and Analysis. Canadian Technical Report of Hydrography and Ocean Sciences, No. 182, 43 pp. WARNING: All samples from Niskin Bottles #13 to #18 should be treated with care. While the CTD data corresponds to the level at which the bottle was fired, in many cases the bottle closed earlier. Notes in the headers of individual files indicate the probable level at which bottles closed, where evidence exists to make that estimate. Comments from secondary file: H:\Cruise_Data_Processing\Lisa Miller's Carbon Data\2008-01\2008-01-0035.iossrt --------------------------------------------------------------------------- Sample_Number 239: C system parameters inconsistent Sample_Number 238: C system parameters inconsistent Sample_Number 237: C system parameters inconsistent Sample_Number 233: Misfire Sample_Number 232: Misfire Sample_Number 230: Misfire Sample_Number 229: Misfire Sample_Number 226: pH: High analytical blank Sample_Number 231: Niskin fired @ 175.5 dbar, likely closed @ 800 m Sample_Number 228: Niskin fired @ 302.7 dbar, likely closed @ 1250 m *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------- ---- ------ ------------ Pressure dbars 10 -99 () (0.5 1) Oxygen:Dissolved:SBE mL/L 10 -99 () (-0.194E-01 1.0633) $END !-1-- --2--- ---3---- --4-- ---5--- --6--- --7-- ---8---- 9- -10- ---11--- 12 ---13-- 14 --15- 16 --17- 18 --19-- 20 ---21-- 22 ---23-- 24 ---25--- 26 !Samp Pressu Temperat Trans Fluores Oxygen Oxyge Salinity Bo Numb Salinity Fl Oxygen: Fl Nitra Fl Silic Fl Phosph Fl Carbon: Fl Alkalin Fl pH Fl !le_ re ure: missi cence: : n: :T1:C1 tt er_o :Bottle ag Dissolv ag te_ ag ate ag ate ag Dissolv ag ity: ag ag !Numb Secondar vity URU: Dissol Disso ~u ~bin ~o ed ~o plus_ ~t ~i ~p ed: ~g Total ~T : !er y Seapoin ved: lved: mb _rec tt lv Nitri ri ca ha Inorgan an ot pH ! t SBE SBE er ords le ed te te te te ic ic al !---- ------ -------- ----- ------- ------ ----- -------- -- ---- -------- -- ------- -- ----- -- ----- -- ------ -- ------- -- ------- -- -------- -- *END OF HEADER 239 5.8 5.9834 56.7 0.785 6.97 303.4 32.5295 24 121 32.5293 0 6.994 0 12.6 0 16.1 0 1.23 0 2011.70 3 2183.80 3 7.7701 3 238 10.7 5.9847 57.2 0.787 6.96 302.8 32.5297 23 121 32.5298 0 6.969 0 12.7 0 16.0 0 1.23 0 2019.20 3 2186.00 3 7.7596 3 237 26.3 5.9844 57.3 0.776 6.95 302.7 32.5297 22 121 32.5313 0 6.956 0 12.5 0 16.4 0 1.22 0 2024.50 3 2196.80 3 7.7622 3 236 51.3 5.9805 57.5 0.758 6.94 302.2 32.5298 21 121 32.5276 0 6.949 0 12.5 0 16.2 0 1.22 0 2033.40 0 2181.60 0 7.7620 0 235 75.1 5.9778 57.8 0.719 6.91 301.0 32.5304 20 121 32.5267 0 6.955 0 12.6 0 16.1 0 1.22 0 2034.80 0 2180.90 0 7.7613 0 234 100.4 6.3193 60.0 0.282 5.20 226.5 33.0909 19 121 33.0605 0 5.312 0 20.5 0 28.1 0 1.61 0 2103.30 0 2219.00 0 7.6478 0 233 126.7 6.2590 60.6 0.133 3.85 167.4 33.7015 18 121 33.6823 4 3.839 4 27.7 4 42.1 4 1.98 4 2175.70 4 2254.10 4 -99.0000 0 232 148.9 5.9478 60.5 0.123 3.18 138.2 33.8111 17 121 34.1881 4 0.512 4 44.2 4 119.5 4 3.09 4 2341.20 4 2339.00 4 7.2911 4 231 175.5 5.6553 60.7 0.123 3.05 132.5 33.8350 16 121 34.2833 4 0.349 4 44.6 4 135.3 4 3.17 4 2362.10 4 2359.20 4 -99.0000 0 230 200.8 5.3630 60.5 0.121 3.10 134.8 33.8321 15 121 34.3680 4 0.279 4 45.1 4 147.8 4 3.20 4 2376.30 4 2377.20 4 7.2978 46 229 252.5 4.9051 60.6 0.123 2.39 104.0 33.8660 14 121 34.4525 4 0.308 4 45.6 4 161.1 4 3.21 4 2388.90 4 2377.70 4 -99.0000 0 228 302.7 4.6419 61.0 0.124 1.72 74.7 33.9160 13 121 34.4530 4 0.330 4 45.9 4 160.1 4 3.22 4 2392.60 4 2393.10 4 7.3084 4 227 399.2 4.2725 61.2 0.122 1.01 43.7 34.0066 12 121 34.0048 0 1.008 0 42.3 0 93.5 0 3.01 0 2304.80 0 2284.10 0 -99.0000 0 226 602.6 3.7288 61.3 0.121 0.53 22.9 34.1914 11 121 34.1866 0 0.512 0 44.3 6 118.6 6 3.14 6 2343.50 0 2314.20 0 7.2935 4 225 799.0 3.3323 61.3 0.119 0.36 15.7 34.2918 10 121 34.2907 0 0.348 0 45.1 0 133.3 0 3.20 0 2364.70 0 2351.60 0 7.2960 0 224 999.2 2.9817 61.4 0.120 0.30 13.0 34.3677 9 121 34.3661 0 0.266 0 45.6 0 146.6 0 3.23 0 2379.40 0 2360.00 0 7.2947 0 223 1250.6 2.6336 61.6 0.117 0.34 14.6 34.4518 8 121 34.4514 0 0.871 3 45.7 0 158.1 0 3.24 0 2391.00 0 2396.80 0 -99.0000 0 222 1498.7 2.3442 61.6 0.113 0.57 24.9 34.5078 7 121 34.5075 0 0.559 0 45.0 0 166.8 0 3.19 0 2393.60 0 2400.30 0 7.3391 0 221 2000.8 1.9345 61.6 0.113 1.30 56.6 34.5886 6 121 34.5884 0 1.384 0 43.2 0 175.6 0 3.05 0 2383.70 0 2415.30 0 -99.0000 0 220 2499.0 1.6947 61.7 0.110 1.95 84.8 34.6323 5 121 34.6321 0 1.992 0 41.2 0 176.4 0 2.92 0 2367.90 0 2423.60 0 -99.0000 0 218 3002.5 1.5973 61.6 0.109 2.38 103.5 34.6537 3 121 34.6531 0 2.463 0 39.2 0 178.4 0 2.77 0 2355.10 0 2431.10 0 7.5018 0 217 3497.2 1.5665 61.4 0.109 2.64 114.8 34.6652 2 121 34.6641 0 2.759 0 39.7 0 177.6 0 2.77 0 2344.70 6 2434.40 6 -99.0000 0 219 3500.8 1.5672 61.4 0.108 2.63 114.5 34.6654 4 121 34.6645 0 2.712 0 40.0 0 176.9 0 2.83 0 2345.00 0 2434.90 0 -99.0000 0 216 3672.0 1.5749 61.2 0.109 2.69 116.7 34.6666 1 121 34.6661 0 2.931 0 39.3 0 177.9 0 2.75 0 2348.80 0 2421.00 0 7.5260 6