*2014/11/20 09:56:00.36 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2008/02/02 09:32:02.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 19 DATA DESCRIPTION : Bottle:Rosette:Up:Stop + CTD:Up FILE TYPE : ASCII CRC : 6C739986 NUMBER OF CHANNELS : 26 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- --------------------------------- --------------- -------------- -------------- 1 Sample_Number n/a 61 79 2 Pressure decibar 5.7 1299.1 3 Temperature:Secondary 'deg C (ITS90)' 2.9554 8.2231 4 Transmissivity %/metre 50.2 61.1 5 Fluorescence:URU:Seapoint mg/m^3 0.119 1.227 6 Oxygen:Dissolved:SBE mL/L 0.26 6.9 7 Oxygen:Dissolved:SBE umol/kg 11.2 300.6 8 Salinity:T1:C1 PSS-78 32.3097 34.4703 9 Bottle_Number n/a 1 19 10 Number_of_bin_records n/a 105 121 11 Salinity:Bottle PSS-78 32.3148 34.4742 12 Flag:Salinity:Bottle n/a 13 Oxygen:Dissolved mL/L 0.226 6.698 14 Flag:Oxygen:Dissolved n/a 15 Nitrate_plus_Nitrite umol/L 10.3 44.6 16 Flag:Nitrate_plus_Nitrite n/a 17 Silicate umol/L 13.2 149 18 Flag:Silicate n/a 19 Phosphate umol/L 1.1 3.31 20 Flag:Phosphate n/a 21 Carbon:Dissolved:Inorganic umol/kg 2015.4 2382.7 22 Flag:Carbon:Dissolved:Inorganic n/a 23 Alkalinity:Total umol/kg 2167.8 2389.9 24 Flag:Alkalinity:Total n/a 25 pH n/a 7.308 7.7831 26 Flag:pH n/a $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 5 I I 0 2 -99 ' ' 7 F ' ' 1 3 -99 ' ' 9 F ' ' 4 4 -99 ' ' 6 F ' ' 1 5 -99 ' ' 8 F ' ' 3 6 -99 ' ' 7 F ' ' 2 7 -99 ' ' 6 F ' ' 1 8 -99 ' ' 9 F ' ' 4 9 -99 ' ' 3 I I 0 10 ' ' ' ' 5 I I 0 11 -99 ' ' 9 F R4 4 12 0 ' ' 3 NQ C ' ' 13 -99 ' ' 8 F ' ' 3 14 0 ' ' 3 NQ C ' ' 15 -99 ' ' 6 F R4 1 16 0 ' ' 3 NQ C ' ' 17 -99 ' ' 6 F R4 1 18 0 ' ' 3 NQ C ' ' 19 -99 ' ' 7 F R4 2 20 0 ' ' 3 NQ C ' ' 21 -99 ' ' ' ' F8.2 R4 ' ' 22 0 ' ' 3 NQ C ' ' 23 -99 ' ' ' ' F8.2 R4 ' ' 24 0 ' ' 3 NQ C ' ' 25 -99 ' ' ' ' F9.4 R4 ' ' 26 0 ' ' 3 NQ C ' ' $END $REMARKS Flag channels initialized with zeros. Non-zero values have the following significance: -------------------------------------------------------------------------------------- 1 = Sample for this measurement was drawn from water bottle but not analyzed (not normally used). 2 = Acceptable measurement (not normally used). 3 = Questionable measurement (no problem observed in sampling or analysis, but value is not trusted, nonetheless; includes outlyers). 4 = Bad measurement (known problem with sampling or analysis, but not serious enough to completely discard the value). 5 = Not reported (lost sample; unredeemably bad measurement). 6 = Mean of replicate measurements. 7 = Manual chromatographic peak measurement. 8 = Irregular digital chromatographic peak integration. 9 = Sample not drawn for this measurement from this bottle (not normally used). -------------------------------------------------------------------------------------- $END *ADMINISTRATION MISSION : 2008-01 AGENCY : IOS, Ocean Science and Productivity, Sidney, B.C. COUNTRY : Canada PROJECT : Line P SCIENTIST : Robert M. PLATFORM : John P. Tully *LOCATION GEOGRAPHIC AREA : North-East Pacific STATION : P4 EVENT NUMBER : 12 LATITUDE : 48 38.88000 N ! (deg min) LONGITUDE : 126 39.94000 W ! (deg min) WATER DEPTH : 1322 ALTIMETER (M) : 7.79 ! custom item $REMARKS Altimeter value is distance from bottom and is calculated as the median of the deepest 2 metres of data. $END *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0550 $TABLE: SENSORS ! Name Abs Depth Serial No ! ------------------------- -------------- ---------- temperature:primary ' ' 4752 conductivity:primary ' ' 3321 pressure ' ' 75636 temperature:secondary ' ' 2968 conductivity:secondary ' ' 3038 Fluorometer ' ' Seapoint transmissometer:primary ' ' 1005DR Oxygen:SBE ' ' 0047 altimeter: ' ' ' ' irradiance:primary ' ' 4565 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.12 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.0 2008/03/14 12:59:43 2282 2282 CLEAN 5.0.2 2008/03/14 13:00:44 ? ? ADDSAMP 3.4 2008/03/14 14:07:16 2282 2282 BINAVE 4.1.1 2008/03/14 14:08:45 2282 19 MERGE 3.3 2008/04/08 13:05:33 19 19 CLEAN 5.0.2 2008/04/08 13:06:37 ? ? CALIB 11.7 2008/04/08 13:07:41 19 19 SORT 3.5 2008/04/08 15:27:34 19 19 REMOVECH 8.0 2008/04/08 15:27:59 19 19 CHGUNITS 3.0 2008/04/08 15:28:37 19 19 REORDER 1.2.1 2008/04/08 15:28:48 ? ? HDREDIT2 2.5.1 2008/04/08 15:29:12 ? ? SORT 3.5 2010/05/08 16:19:14 19 19 MERGE 3.3 2010/05/08 16:20:02 19 19 HDREDIT2 2.5.1 2010/05/08 16:28:00 ? ? SORT 3.5 2010/05/08 16:29:44 19 19 CHANGE_FLAGS 1.0 2013/12/31 10:48:27 19 19 CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/31 10:49:53 19 19 CHANGE_FLAGS 2.0 2014/11/20 09:56:00 19 19 $END $REMARKS -CLEAN functions: 2008/03/14 13:00:37 20 Set event to last 4 characters of file name -The following ADDSAMP parameters were used: Sample Number Lookup File: Q:\Cruise_Data_Processing\2008-01\Processing\hydro\addsamp.csv Bottle Channel Name: Bottle_Number -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -The following MERGE parameters were used: 2008/04/08 13:05:33 2008/04/08 13:05:33 2008/04/08 13:05: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Salinity:Bottle, Flag:Salinity:Bottle, Chlorophyll:Extracted, Flag:Chlorophyll:Extracted, Oxygen:Dissolved, Flag:Oxygen:Dissolved, Nitrate_plus_Nitrite, Flag:Nitrate_plus_Nitrite, Silicate, Flag:Silicate, Phosphate, Flag:Phosphate, Dimethyl_Sulphide, Flag:Dimethyl_Sulphide Primary file : Q:\Cruise_Data_Processing\2008-01\Processing\hydro\2008-01-0012.samavg Secondary file: Q:\Cruise_Data_Processing\2008-01\Processing\hydro\2008-01-0012.mrgcln1 -CLEAN functions: 2008/04/08 13:06:36 20 Remove Sea-Bird comments from the header. Remove remark heading: "Comments from secondary" -CALIB parameters: 2008/04/08 13:07:41 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = Q:\Cruise_Data_Processing\2008-01\Processing\doc\2008-01-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 3 Pressure dbars 10 0.5000000E+00 0.1000000E+01 11 Oxygen:Dissolved:SBE mL/L 10 -0.1940000E-01 0.1063300E+01 -SORT parameters: 2008/04/08 15:27:34 Sorted in ascending order of channel Press* -REMOVECH 2008/04/08 15:27:59 11 channels removed. -CHANGE units: 'Oxygen:Dissolved:SBE' changed from mL/L to umol/kg -HEADER EDITS: 2008/04/08 15:29:12 Applied edit header: Q:\Cruise_Data_Processing\2008-01\Processing\doc\2008-01-bot-hdr.txt Channel 2: Pressure [decibar] Units: dbars ==> decibar Format: F11.2 ==> F7.1 Channel 5: Fluorescence:URU:Seapoint [mg/m^3] Name: Fluorescence:Seapoint ==> Fluorescence:URU:Seapoint Channel 6: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 11: Salinity:Bottle [PSS-78] Units: ==> PSS-78 -SORT parameters: 2010/05/08 16:19:14 Sorted in ascending order of channel Sample_Number -The following MERGE parameters were used: 2010/05/08 16:20:02 Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Average Primary Channels to Include: ALL Secondary Channels to Include: Carbon:Dissolved:Inorganic, Flag:Carbon:Dissolved:Inorganic, Alkalinity:Total, Flag:Alkalinity:Total, pH, Flag:pH Primary file : H:\Cruise_Data_Processing\Lisa Miller's Carbon Data\2008-01\2008-01-0012.chesrt Secondary file: H:\Cruise_Data_Processing\Lisa Miller's Carbon Data\2008-01\2008-01-0012.iossrt Comments from secondary file: H:\Cruise_Data_Processing\Lisa Miller's Carbon Data\2008-01\2008-01-0012.iossrt --------------------------------------------------------------------------- -SORT parameters: 2010/05/08 16:15:43 Sorted in ascending order of channel Sample_Number [ ] -HEADER EDITS: 2010/05/08 16:28:00 Applied edit header: H:\Cruise_Data_Processing\Lisa Miller's Carbon Data\DIC_ALK_pH.txt -SORT parameters: 2010/05/08 16:29:44 Sorted in ascending order of channel Pressure $END *COMMENTS Sample_Number 64: Salinity: Analysis on Portasal adjusted by adding 0.0018 to match Autosal Sample_Number 65: Salinity: Analysis on Portasal adjusted by adding 0.0018 to match Autosal Sample_Number 77: Salinity: liner cap loose Dissolved Oxygen Sample #69: Average of values 1.638 and 1.625 Analysis methods: ----------------- Chlorophyll samples were analyzed at sea using a Chemistry Turner Designs fluorometer which was calibrated in May 2007 using pure chlorophyll a. Chlorophyll precision was determined by analyzing replicate samples drawn from one Niskin. For details see worksheet “Precision” in file QF 2008-01CHL.xls. Oxygen samples are analyzed on an automated Winkler titration system following the procedures of Carpenter (1965). Samples were analyzed at sea using an automated titration system consisting of a Brinkman Dosimat (model 665) and a PC 900 Colorimeter. For details on precision see file 2008-01-DO-duplicates.xls. Salinity samples were collected in glass bottles and analyzed on a Guildline model 8400B Autosal or a Guildline Portasal 8410A. Salinometers are standardized with IAPSO standard seawater. See file 2008-01-duplicates-sal.xls for information on precision. Nutrient samples were collected in plastic tubes and analyzed fresh at sea using a Technicon AAII autoanalyzer following methods described in Barwell-Clarke and Whitney (1996). For details on nutrient duplicates and precision see file QF 2008-01nuts.xls. Dissolved inorganic carbon (DIC) was determined using coulometric analysis. Total alkalinity (Alk) was determined by potentiometric titration. pH on the total hydrogren ion concentration scale was determined photometrically and is reported at 25C and surface pressure. Complete documentation on DIC, ALK and pH sampling, analysis and precision estimates can be found in the Carbon Excel file from the cruise located in the cruise "DOC" directory. . References: 1. Carpenter, J.H. 1965. The Chesapeake Bay Institute Technique for the Winkler Dissolved Oxygen Method. Limmnol. & Oceanogr., 10: 141-143. 2. J. Barwell-Clarke and F. Whitney. 1996. Institute of Ocean Sciences Nutrient Methods and Analysis. Canadian Technical Report of Hydrography and Ocean Sciences, No. 182, 43 pp. WARNING: All samples from Niskin Bottles #13 to #18 should be treated with care. While the CTD data corresponds to the level at which the bottle was fired, in many cases the bottle closed earlier. Notes in the headers of individual files indicate the probable level at which bottles closed, where evidence exists to make that estimate. Comments from secondary file: H:\Cruise_Data_Processing\Lisa Miller's Carbon Data\2008-01\2008-01-0012.iossrt --------------------------------------------------------------------------- Sample_Number 77: C system parameters inconsistent Sample_Number 73: Alk: High relative to TIC and pH Sample_Number 67: Alk: Low relative to TIC and pH Sample_Number 65: Alk: Low, inconsistent w/TIC and pH Sample_Number 63: TIC & Alk: Large difference between replicates; Alk: Differs from replicate nisk Sample_Number 64: Alk: Differs from replicate niskin Sample_Number 61: pH: Large difference between replicates, T unstable *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------- ---- ------ ------------ Pressure dbars 10 -99 () (0.5 1) Oxygen:Dissolved:SBE mL/L 10 -99 () (-0.194E-01 1.0633) $END !-1-- --2--- ---3---- --4-- ---5--- --6--- --7-- ---8---- 9- -10- ---11--- 12 ---13-- 14 --15- 16 --17- 18 --19-- 20 ---21-- 22 ---23-- 24 ---25--- 26 !Samp Pressu Temperat Trans Fluores Oxygen Oxyge Salinity Bo Numb Salinity Fl Oxygen: Fl Nitra Fl Silic Fl Phosph Fl Carbon: Fl Alkalin Fl pH Fl !le_ re ure: missi cence: : n: :T1:C1 tt er_o :Bottle ag Dissolv ag te_ ag ate ag ate ag Dissolv ag ity: ag ag !Numb Secondar vity URU: Dissol Disso ~u ~bin ~o ed ~o plus_ ~t ~i ~p ed: ~g Total ~T : !er y Seapoin ved: lved: mb _rec tt lv Nitri ri ca ha Inorgan an ot pH ! t SBE SBE er ords le ed te te te te ic ic al !---- ------ -------- ----- ------- ------ ----- -------- -- ---- -------- -- ------- -- ----- -- ----- -- ------ -- ------- -- ------- -- -------- -- *END OF HEADER 79 5.7 7.7699 50.3 1.220 6.90 300.4 32.3097 19 121 32.3154 0 6.698 0 11.3 0 16.0 0 1.15 0 2016.40 0 2167.90 0 7.7725 0 78 11.4 7.7765 50.2 1.227 6.90 300.6 32.3104 18 121 32.3148 0 6.697 0 11.3 0 16.0 0 1.15 0 2015.40 0 2167.80 0 7.7831 0 77 25.2 7.8126 54.7 0.867 6.84 298.0 32.4184 17 121 32.4221 3 6.631 0 10.5 0 13.9 0 1.11 0 2017.80 3 2182.30 3 7.7681 3 76 49.0 7.8197 56.5 0.717 6.80 296.3 32.4370 16 121 32.4410 0 6.614 0 10.3 0 13.2 0 1.10 0 2017.90 0 2173.40 0 7.7730 0 75 76.5 8.2231 59.6 0.252 5.39 234.6 32.8209 15 121 32.8163 0 5.396 0 16.4 0 19.3 0 1.45 0 2070.10 0 2187.30 0 7.6813 0 74 102.7 7.7990 59.1 0.142 3.84 166.9 33.3761 14 121 33.3868 0 3.736 0 25.2 0 30.5 0 1.96 0 2152.20 0 2224.90 0 7.5570 0 73 127.8 7.7805 58.5 0.124 2.87 125.0 33.6796 13 121 33.6739 0 2.791 0 29.6 0 38.3 0 2.23 0 2192.30 0 2265.00 3 7.4690 0 72 153.5 7.6518 59.2 0.119 2.44 106.0 33.8087 12 121 33.8151 0 2.376 0 31.5 0 42.0 0 2.35 0 2204.30 0 2250.20 0 7.4419 0 71 176.9 7.4705 59.5 0.120 2.28 99.1 33.8716 11 121 33.8704 0 2.208 0 32.3 0 44.2 0 2.40 0 2218.50 0 2256.00 0 7.4356 0 70 199.6 7.0424 59.3 0.123 2.29 99.8 33.9017 10 121 33.8986 0 2.239 0 33.0 0 47.8 0 2.41 0 2225.30 0 2256.80 0 7.4340 0 69 253.2 6.6768 59.7 0.120 1.67 72.7 33.9774 9 121 33.9790 0 1.631 6 35.8 0 56.1 0 2.62 0 2250.50 0 2269.90 0 7.3928 0 68 300.7 6.2767 60.3 0.121 1.46 63.7 34.0036 8 121 34.0061 0 1.424 0 37.7 0 61.9 0 2.71 0 2261.50 0 2276.40 0 7.3762 0 67 401.3 5.6332 60.7 0.121 0.99 43.1 34.0580 7 121 34.0607 0 0.951 0 40.4 0 74.7 0 2.92 0 2287.20 0 2274.70 3 7.3386 0 66 601.2 4.7809 61.1 0.123 0.44 19.3 34.1673 6 121 34.1723 0 0.413 0 43.1 0 95.5 0 3.15 0 2324.20 0 2319.60 0 7.3103 0 65 800.5 4.1146 60.4 0.124 0.26 11.2 34.2933 5 121 34.2950 3 0.226 0 44.1 6 116.3 6 3.27 6 2351.20 0 2330.80 3 7.3080 0 63 1000.6 3.5127 60.5 0.122 0.29 12.7 34.3939 3 105 34.3958 0 0.260 0 44.4 0 133.8 0 3.31 0 2369.20 36 2366.10 36 -99.0000 0 64 1003.0 3.5120 60.5 0.123 0.29 12.7 34.3941 4 120 34.3960 3 0.267 0 44.6 0 134.2 0 3.30 0 2368.70 3 2368.60 36 7.3249 0 62 1252.3 3.0618 60.5 0.119 0.44 19.1 34.4572 2 121 34.4587 0 0.442 0 44.4 0 146.1 0 3.29 0 2378.50 0 2374.70 0 7.3305 0 61 1299.1 2.9554 60.6 0.119 0.49 21.2 34.4703 1 121 34.4742 0 0.507 0 44.5 0 149.0 0 3.27 0 2382.70 0 2389.90 0 7.3397 36