*2014/11/20 09:55:58.10 *IOS HEADER VERSION 1.10 2011/10/26 2011/10/26 *FILE START TIME : UTC 2008/02/01 18:36:33.000 TIME INCREMENT : 0 0 0 0.416667E-01 0 ! (day hr min sec ms) NUMBER OF RECORDS : 13 DATA DESCRIPTION : Bottle:Rosette:Up:Stop + CTD:Up FILE TYPE : ASCII CRC : A7B13E5C NUMBER OF CHANNELS : 23 $TABLE: CHANNELS ! No Name Units Minimum Maximum !--- ---------------------------- --------------- -------------- -------------- 1 Sample_Number n/a 13 25 2 Pressure decibar 6.8 111.03 3 Temperature:Secondary 'deg C (ITS90)' 7.9865 8.4734 4 Transmissivity %/metre 44.5 58.9 5 Fluorescence:URU:Seapoint mg/m^3 0.152 0.726 6 Oxygen:Dissolved:SBE mL/L 3.933 6.801 7 Oxygen:Dissolved:SBE umol/kg 171.1464 296.1376 8 PAR uE/m^2/sec 0 223.066 9 Salinity:T1:C1 PSS-78 32.4282 33.3422 10 Bottle_Number n/a 1 13 11 Number_of_bin_records n/a 91 121 12 Salinity:Bottle PSS-78 32.4322 33.3597 13 Flag:Salinity:Bottle n/a 14 Chlorophyll:Extracted mg/m^3 0.4E-01 0.71 15 Flag:Chlorophyll:Extracted n/a 16 Oxygen:Dissolved mL/L 3.943 6.588 17 Flag:Oxygen:Dissolved n/a 18 Nitrate_plus_Nitrite umol/L 10.7 24.9 19 Flag:Nitrate_plus_Nitrite n/a 20 Silicate umol/L 14.2 33.1 21 Flag:Silicate n/a 22 Phosphate umol/L 1.1 1.97 23 Flag:Phosphate n/a $END $TABLE: CHANNEL DETAIL ! No Pad Start Width Format Type Decimal_Places !--- ---- ----- ----- ------ ---- -------------- 1 -99 ' ' 5 I I 0 2 -99 ' ' 7 F ' ' 1 3 -99 ' ' 9 F ' ' 4 4 -99 ' ' 6 F ' ' 1 5 -99 ' ' 8 F ' ' 3 6 -99 ' ' 7 F ' ' 2 7 -99 ' ' 6 F ' ' 1 8 -99 ' ' 7 F ' ' 1 9 -99 ' ' 9 F ' ' 4 10 -99 ' ' 3 I I 0 11 ' ' ' ' 5 I I 0 12 -99 ' ' 9 F R4 4 13 0 ' ' 3 NQ C ' ' 14 -99 ' ' 7 F R4 2 15 0 ' ' 3 NQ C ' ' 16 -99 ' ' 8 F ' ' 3 17 0 ' ' 3 NQ C ' ' 18 -99 ' ' 6 F R4 1 19 0 ' ' 3 NQ C ' ' 20 -99 ' ' 6 F R4 1 21 0 ' ' 3 NQ C ' ' 22 -99 ' ' 7 F R4 2 23 0 ' ' 3 NQ C ' ' $END $REMARKS Flag channels initialized with zeros. Non-zero values have the following significance: -------------------------------------------------------------------------------------- 1 = Sample for this measurement was drawn from water bottle but not analyzed (not normally used). 2 = Acceptable measurement (not normally used). 3 = Questionable measurement (no problem observed in sampling or analysis, but value is not trusted, nonetheless; includes outlyers). 4 = Bad measurement (known problem with sampling or analysis, but not serious enough to completely discard the value). 5 = Not reported (lost sample; unredeemably bad measurement). 6 = Mean of replicate measurements. 7 = Manual chromatographic peak measurement. 8 = Irregular digital chromatographic peak integration. 9 = Sample not drawn for this measurement from this bottle (not normally used). -------------------------------------------------------------------------------------- $END *ADMINISTRATION MISSION : 2008-01 AGENCY : IOS, Ocean Science and Productivity, Sidney, B.C. COUNTRY : Canada PROJECT : Line P SCIENTIST : Robert M. PLATFORM : John P. Tully *LOCATION GEOGRAPHIC AREA : North-East Pacific STATION : P2 EVENT NUMBER : 3 LATITUDE : 48 35.90000 N ! (deg min) LONGITUDE : 126 0.13000 W ! (deg min) WATER DEPTH : 115 ALTIMETER (M) : 6.98 ! custom item $REMARKS Altimeter value is distance from bottom and is calculated as the median of the deepest 2 metres of data. $END *INSTRUMENT TYPE : Sea-Bird CTD MODEL : SBE-911plus SERIAL NUMBER : 0550 $TABLE: SENSORS ! Name Abs Depth Serial No ! ------------------------- -------------- ---------- temperature:primary ' ' 4752 conductivity:primary ' ' 3321 pressure ' ' 75636 temperature:secondary ' ' 2968 conductivity:secondary ' ' 3038 Fluorometer ' ' Seapoint transmissometer:primary ' ' 1005DR Oxygen:SBE ' ' 0047 altimeter: ' ' ' ' irradiance:primary ' ' 4565 $END $REMARKS SOFTWARE VERSION SEASAVE V 7.12 $END *HISTORY $TABLE: PROGRAMS ! Name Vers Date Time Recs In Recs Out ! ------------------------ ------ ---------- -------- --------- --------- SBE_IOS 3.0 2008/03/14 12:59:39 1542 1542 CLEAN 5.0.2 2008/03/14 13:00:39 ? ? ADDSAMP 3.4 2008/03/14 14:07:11 1542 1542 BINAVE 4.1.1 2008/03/14 14:08:43 1542 13 MERGE 3.3 2008/04/08 13:05:33 13 13 CLEAN 5.0.2 2008/04/08 13:06:36 ? ? CALIB 11.7 2008/04/08 13:07:40 13 13 SORT 3.5 2008/04/08 15:27:34 13 13 REMOVECH 8.0 2008/04/08 15:28:15 13 13 CHGUNITS 3.0 2008/04/08 15:28:36 13 13 REORDER 1.2.1 2008/04/08 15:28:48 ? ? HDREDIT2 2.5.1 2008/04/08 15:29:12 ? ? CHANGE_FLAGS 1.0 2013/07/16 11:48:57 13 13 CHANGE_CTD_CHANNEL_NAMES 1.0 2013/12/16 15:33:31 13 13 CHANGE_FLAGS 2.0 2014/11/20 09:55:58 13 13 $END $REMARKS -CLEAN functions: 2008/03/14 13:00:37 20 Set event to last 4 characters of file name -The following ADDSAMP parameters were used: Sample Number Lookup File: Q:\Cruise_Data_Processing\2008-01\Processing\hydro\addsamp.csv Bottle Channel Name: Bottle_Number -The following BINAVE parameters were used: Bin channel = Bottle_Number Averaging interval = 1.00 Minimum bin value = 0.000 Average value was used Interpolated values were NOT used for empty bins Channel 'NUMBER_OF_BIN_RECORDS' was added to file. -The following MERGE parameters were used: 2008/04/08 13:05:33 2008/04/08 13:05:33 2008/04/08 13:05: Merge Channel: Sample_Number Merge Scheme Used: Add Secondary to Primary Overlap Scheme Used: Keep Primary Primary Channels to Include: ALL Secondary Channels to Include: Salinity:Bottle, Flag:Salinity:Bottle, Chlorophyll:Extracted, Flag:Chlorophyll:Extracted, Oxygen:Dissolved, Flag:Oxygen:Dissolved, Nitrate_plus_Nitrite, Flag:Nitrate_plus_Nitrite, Silicate, Flag:Silicate, Phosphate, Flag:Phosphate, Dimethyl_Sulphide, Flag:Dimethyl_Sulphide Primary file : Q:\Cruise_Data_Processing\2008-01\Processing\hydro\2008-01-0003.samavg Secondary file: Q:\Cruise_Data_Processing\2008-01\Processing\hydro\2008-01-0003.mrgcln1 -CLEAN functions: 2008/04/08 13:06:36 20 Remove Sea-Bird comments from the header. Remove remark heading: "Comments from secondary" -CALIB parameters: 2008/04/08 13:07:40 Calibration type = Correct Mode: ONLY - calibration specs from Cal File only. Calibration file = Q:\Cruise_Data_Processing\2008-01\Processing\doc\2008-01-recal1.ccf Calibrations applied: Ch Name Units Fmla Coefficents -- ----------------------------- --------- --- ----------------------------- 3 Pressure dbars 10 0.5000000E+00 0.1000000E+01 11 Oxygen:Dissolved:SBE mL/L 10 -0.1940000E-01 0.1063300E+01 -SORT parameters: 2008/04/08 15:27:34 Sorted in ascending order of channel Press* -REMOVECH 2008/04/08 15:28:15 10 channels removed. -CHANGE units: 'Oxygen:Dissolved:SBE' changed from mL/L to umol/kg -HEADER EDITS: 2008/04/08 15:29:12 Applied edit header: Q:\Cruise_Data_Processing\2008-01\Processing\doc\2008-01-bot-hdr.txt Channel 2: Pressure [decibar] Units: dbars ==> decibar Format: F11.2 ==> F7.1 Channel 5: Fluorescence:URU:Seapoint [mg/m^3] Name: Fluorescence:Seapoint ==> Fluorescence:URU:Seapoint Channel 6: Oxygen:Dissolved:SBE [mL/L] Format: F8.3 ==> F7.2 Channel 8: PAR [uE/m^2/sec] Format: F11.3 ==> F7.1 Channel 12: Salinity:Bottle [PSS-78] Units: ==> PSS-78 $END *COMMENTS Sample_Number 13: Salinity: Analysis on Portasal adjusted by adding 0.0018 to match Autosal Sample_Number 14: Salinity: Analysis on Portasal adjusted by adding 0.0018 to match Autosal Sample_Number 15: Salinity: Analysis on Portasal adjusted by adding 0.0018 to match Autosal Sample_Number 16: Salinity: Analysis on Portasal adjusted by adding 0.0018 to match Autosal Sample_Number 17: Salinity: Analysis on Portasal adjusted by adding 0.0018 to match Autosal Sample_Number 18: Salinity: Analysis on Portasal adjusted by adding 0.0018 to match Autosal Sample_Number 17: Extracted CHL: Chl #17 and #18a may be switched Sample_Number 18: Extracted CHL: Chl #17 and #18a may be switched Dissolved Oxygen Sample #18: Average of values 6.586 and 6.591 Analysis methods: ----------------- Chlorophyll samples were analyzed at sea using a Chemistry Turner Designs fluorometer which was calibrated in May 2007 using pure chlorophyll a. Chlorophyll precision was determined by analyzing replicate samples drawn from one Niskin. For details see worksheet “Precision” in file QF 2008-01CHL.xls. Oxygen samples are analyzed on an automated Winkler titration system following the procedures of Carpenter (1965). Samples were analyzed at sea using an automated titration system consisting of a Brinkman Dosimat (model 665) and a PC 900 Colorimeter. For details on precision see file 2008-01-DO-duplicates.xls. Salinity samples were collected in glass bottles and analyzed on a Guildline model 8400B Autosal or a Guildline Portasal 8410A. Salinometers are standardized with IAPSO standard seawater. See file 2008-01-duplicates-sal.xls for information on precision. Nutrient samples were collected in plastic tubes and analyzed fresh at sea using a Technicon AAII autoanalyzer following methods described in Barwell-Clarke and Whitney (1996). For details on nutrient duplicates and precision see file QF 2008-01nuts.xls. References: 1. Carpenter, J.H. 1965. The Chesapeake Bay Institute Technique for the Winkler Dissolved Oxygen Method. Limmnol. & Oceanogr., 10: 141-143. 2. J. Barwell-Clarke and F. Whitney. 1996. Institute of Ocean Sciences Nutrient Methods and Analysis. Canadian Technical Report of Hydrography and Ocean Sciences, No. 182, 43 pp. WARNING: All samples from Niskin Bottles #13 to #18 should be treated with care. While the CTD data corresponds to the level at which the bottle was fired, in many cases the bottle closed earlier. Notes in the headers of individual files indicate the probable level at which bottles closed, where evidence exists to make that estimate. *CALIBRATION $TABLE: CORRECTED CHANNELS ! Name Units Fmla Pad Coefficients ! ---------------------- ------- ---- ------ ------------ Pressure dbars 10 -99 () (0.5 1) Oxygen:Dissolved:SBE mL/L 10 -99 () (-0.194E-01 1.0633) $END !-1-- --2--- ---3---- --4-- ---5--- --6--- --7-- --8--- ---9---- 10 -11- ---12--- 13 --14-- 15 ---16-- 17 --18- 19 --20- 21 --22-- 23 !Samp Pressu Temperat Trans Fluores Oxygen Oxyge PAR Salinity Bo Numb Salinity Fl Chloro Fl Oxygen: Fl Nitra Fl Silic Fl Phosph Fl !le_ re ure: missi cence: : n: :T1:C1 tt er_o :Bottle ag phyll: ag Dissolv ag te_ ag ate ag ate ag !Numb Secondar vity URU: Dissol Disso ~u ~bin ~o Extrac ~a ed ~o plus_ ~t ~i ~p !er y Seapoin ved: lved: mb _rec tt ted ct lv Nitri ri ca ha ! t SBE SBE er ords le ed ed te te te te !---- ------ -------- ----- ------- ------ ----- ------ -------- -- ---- -------- -- ------ -- ------- -- ----- -- ----- -- ------ -- *END OF HEADER 24 6.8 8.0102 51.8 0.522 6.80 296.1 216.4 32.4282 12 91 32.4327 0 0.67 0 6.581 0 10.8 0 15.5 0 1.11 0 25 7.1 8.0114 53.1 0.482 6.80 296.1 223.1 32.4283 13 120 -99.0000 0 -99.00 0 -99.000 0 -99.0 0 -99.0 0 -99.00 0 20 9.6 8.0237 55.0 0.528 6.79 295.6 129.8 32.4284 8 121 -99.0000 0 -99.00 0 -99.000 0 -99.0 0 -99.0 0 -99.00 0 23 9.7 8.0194 55.0 0.533 6.79 295.7 142.7 32.4285 11 121 32.4322 0 0.71 0 6.578 0 10.7 0 15.2 0 1.11 0 22 9.8 8.0231 55.0 0.537 6.80 295.9 129.9 32.4284 10 121 -99.0000 0 -99.00 0 -99.000 0 -99.0 0 -99.0 0 -99.00 0 21 10.1 8.0236 55.0 0.535 6.79 295.7 148.4 32.4284 9 121 -99.0000 0 -99.00 0 -99.000 0 -99.0 0 -99.0 0 -99.00 0 19 10.3 8.0244 55.0 0.517 6.80 295.9 94.9 32.4282 7 121 -99.0000 0 -99.00 0 -99.000 0 -99.0 0 -99.0 0 -99.00 0 18 25.5 7.9952 55.0 0.726 6.79 295.7 39.7 32.4297 6 121 32.4339 3 0.62 6 6.588 6 10.7 0 14.2 0 1.11 0 17 50.7 7.9865 55.9 0.695 6.77 295.0 3.9 32.4479 5 121 32.4541 3 0.66 0 6.072 0 10.7 0 14.8 0 1.10 0 15 76.3 8.3479 58.9 0.236 5.31 231.3 0.6 32.9066 3 121 32.8990 3 0.12 0 5.246 0 17.6 0 22.0 0 1.51 0 16 76.5 8.3493 58.9 0.241 5.34 232.2 0.6 32.9097 4 121 32.8983 3 0.12 0 5.231 0 17.6 0 22.4 0 1.50 0 14 100.2 8.4734 48.5 0.156 4.08 177.6 0.0 33.3010 2 121 33.3040 36 0.04 0 3.972 0 23.9 6 32.0 6 1.91 6 13 111.0 8.4356 44.5 0.152 3.93 171.1 0.0 33.3422 1 121 33.3597 3 -99.00 0 3.943 0 24.9 0 33.1 0 1.97 0